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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043787 ID=TCONS_00043787|Name=TCONS_00043787|organism=Clytia hemisphaerica|type=transcript|length=703bp
tcaaaaacttttttcattgaCAGGTAGTCATGCTATACTGGATGGTTTGT
CCATATCTGATTTCGCATTTGCTCAATTCCTACCTACTCTAAACAATCTG
CTGAATGGGGATGAACTAAGCATTAAGTCAattgaccaatcagattcgat
ACAGCTTACGAAATCGACCACTGAGATTTATTCGAATCTAAAGGCACCGC
AAGAATCATATCAACAATATCCAGTaccatttttgaaagaaaaagctcTT
GGTGTTGGAATCTCCTTGATCTCAATGTTGAATCTGAAACCTAAACCTCC
ACCAATGAGGgtctttgaaaacaaaaataacaacgGTTGTACAGAGTTTC
ATCAATTTGAGATCGATGGAGAAACAGCATTTAATTTTCGCCGTGTTTGT
AAAGAAAATTCACTGTCCTTCCAAGCTATGTTGATGCTGTTGATTGGTAA
TGCTATGAAAGAATGCGAGAATCATTTTCCACACTTTAAGGCTAATATAC
ACGAGATACGATATCCAGTCGACGTTCGTCGCTTCAATAAGGCCCTGTCT
ACATCACCGTTACCGGTAGCAGTTCACGTTCAATCTGTGGCGCAGAAAAT
TCGACCACAACCAACAGAGAATGTAGCAGAGTTTCTCAAATATGCTCACG
AAGTATCAGAAAGTGTTCGTAGTTTTAAGGGACCAGCTCCAGCCAGTGAT
CTG Run BLAST on NCBI protein sequence of TCONS_00043787-protein >TCONS_00043787-protein ID=TCONS_00043787-protein|Name=TCONS_00043787-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
QKLFSLTGSHAILDGLSISDFAFAQFLPTLNNLLNGDELSIKSIDQSDSI
QLTKSTTEIYSNLKAPQESYQQYPVPFLKEKALGVGISLISMLNLKPKPP
PMRVFENKNNNGCTEFHQFEIDGETAFNFRRVCKENSLSFQAMLMLLIGN
AMKECENHFPHFKANIHEIRYPVDVRRFNKALSTSPLPVAVHVQSVAQKI
RPQPTENVAEFLKYAHEVSESVRSFKGPAPASDL Run BLAST on NCBI transcript from alignment at sc0004582:1..703 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043787 ID=TCONS_00043787|Name=TCONS_00043787|organism=Clytia hemisphaerica|type=transcript|length=703bp|location=Sequence derived from alignment at sc0004582:1..703 (Clytia hemisphaerica)
CAGATCACTGGCTGGAGCTGGTCCCTTAAAACTACGAACACTTTCTGATA
CTTCGTGAGCATATTTGAGAAACTCTGCTACATTCTCTGTTGGTTGTGGT
CGAATTTTCTGCGCCACAGATTGAACGTGAACTGCTACCGGTAACGGTGA
TGTAGACAGGGCCTTATTGAAGCGACGAACGTCGACTGGATATCGTATCT
CGTGTATATTAGCCTTAAAGTGTGGAAAATGATTCTCGCATTCTTTCATA
GCATTACCAATCAACAGCATCAACATAGCTTGGAAGGACAGTGAATTTTC
TTTACAAACACGGCGAAAATTAAATGCTGTTTCTCCATCGATCTCAAATT
GATGAAACTCTGTACAACcgttgttatttttgttttcaaagacCCTCATT
GGTGGAGGTTTAGGTTTCAGATTCAACATTGAGATCAAGGAGATTCCAAC
ACCAAgagctttttctttcaaaaatggtACTGGATATTGTTGATATGATT
CTTGCGGTGCCTTTAGATTCGAATAAATCTCAGTGGTCGATTTCGTAAGC
TGTatcgaatctgattggtcaatTGACTTAATGCTTAGTTCATCCCCATT
CAGCAGATTGTTTAGAGTAGGTAGGAATTGAGCAAATGCGAAATCAGATA
TGGACAAACCATCCAGTATAGCATGACTACCTGtcaatgaaaaaagtttt
tga Coding sequence (CDS) from alignment at sc0004582:1..703 >TCONS_00043787 ID=TCONS_00043787|Name=TCONS_00043787|organism=Clytia hemisphaerica|type=CDS|length=702bp|location=Sequence derived from alignment at sc0004582:1..703 (Clytia hemisphaerica)
CAGATCACTGGCTGGAGCTGGTCCCTTAAAACTACGAACACTTTCTGATA
CTTCGTGAGCATATTTGAGAAACTCTGCTACATTCTCTGTTGGTTGTGGT
CGAATTTTCTGCGCCACAGATTGAACGTGAACTGCTACCGGTAACGGTGA
TGTAGACAGGGCCTTATTGAAGCGACGAACGTCGACTGGATATCGTATCT
CGTGTATATTAGCCTTAAAGTGTGGAAAATGATTCTCGCATTCTTTCATA
GCATTACCAATCAACAGCATCAACATAGCTTGGAAGGACAGTGAATTTTC
TTTACAAACACGGCGAAAATTAAATGCTGTTTCTCCATCGATCTCAAATT
GATGAAACTCTGTACAACcgttgttatttttgttttcaaagacCCTCATT
GGTGGAGGTTTAGGTTTCAGATTCAACATTGAGATCAAGGAGATTCCAAC
ACCAAgagctttttctttcaaaaatggtACTGGATATTGTTGATATGATT
CTTGCGGTGCCTTTAGATTCGAATAAATCTCAGTGGTCGATTTCGTAAGC
TGTatcgaatctgattggtcaatTGACTTAATGCTTAGTTCATCCCCATT
CAGCAGATTGTTTAGAGTAGGTAGGAATTGAGCAAATGCGAAATCAGATA
TGGACAAACCATCCAGTATAGCATGACTACCTGtcaatgaaaaaagtttt
tg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043787-exon-sc0004582-1491911889:1..703 | TCONS_00043787-exon-sc0004582-1491911889:1..703 | Clytia hemisphaerica | exon |
| TCONS_00043787-exon-sc0004582-1510915933:1..703 | TCONS_00043787-exon-sc0004582-1510915933:1..703 | Clytia hemisphaerica | exon |
| TCONS_00043787-exon-sc0004582-1575043694:1..703 | TCONS_00043787-exon-sc0004582-1575043694:1..703 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004582 | supercontig | sc0004582:1..703 . |
Blast
The following BLAST results are available for this feature:
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