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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043784 ID=TCONS_00043784|Name=TCONS_00043784|organism=Clytia hemisphaerica|type=transcript|length=203bp
ATCCACCACAATAATCAAACTTATGATCCAAAGGAATTTCAGGAAGAAAA
CGCCGAAAACATGGGTGAAAGCCTTGAAGTTGAAGATCGTGAGATTGAAG
AAATTCTCCAACTGTCTACTGATCATATAAATACGAGTGGTGGTAGTGCA
ACATCGAAAAGTACCCCAAAGTCAAAGTCTTCCAGTAAATATGCAAACCT
GCT Run BLAST on NCBI transcript from alignment at sc0004581:358..2417- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043784 ID=TCONS_00043784|Name=TCONS_00043784|organism=Clytia hemisphaerica|type=transcript|length=2060bp|location=Sequence derived from alignment at sc0004581:358..2417- (Clytia hemisphaerica)
ATCCACCACAATAATCAAACTTATGATCCAAAGGAATTTCAGGAAGAAAA
CGCCGAAAACATGGGTGAAAGGTATGTTAAGCTTTCTAGTTTTCCAATTT
GGGTTGACTGAAGATAATTCTGTTTCAAGAAAAGATGTATTTATTATTTT
GAGTCCAGTACTTGTCTCCAAAAATAGATGCAAAATTAGGCCAAATCTTG
CATATTTGAACAAAGTAGTCTTACTGCCAAGAATGTTTGCAAAGAAGCTC
TAGGTAGAACGTTGAAATGTTAGGGTGGAAAGTTTACTTTTGAGTTGTTC
TTAACTTCAAAATGCACATTACCGTAGAACCGCTCAACATTCCCAATAAA
GGCTTTACTTTCCAAGGCGACAAAGCAAAAATAATTTAAAAAATCTGGGG
TTTTGAAGGAATTTGATTTCAAATTTACCGTAAGATTGACTTTCCGATAT
GAGGTTGGATAATATAAATCTTTTTCTTTCCGTCTAAAATTATACAATCT
TATCTCCCTAATATTGCAAAATTGACTGCACAATATATTAGCGAATATAA
CAGGGCCGTTCCCCCATTAAGTTTAAAATGCCACAGGCCGTTTGGGCGAT
CATCAAAATTATGTTCTGTTCGGCATCCATAAAACATCTTCAAATCCAGT
CGGTTGGTCGGTAGTATATTTCGTTGGGTTTTTAACATTTAGTAAATCTC
TAAATATTATGTCGGCAATCAACAAAATCTTTTGCAGCCATTTTTGAAAT
GTGCGCGCACATGTTAACCTTAAAAGCGAACCTTATTTTCAGCCCTCAGG
GTATCGGCCCCATTGCGTCGCTGAATTTCGACTTAAAAATTTCAATAAGG
GTGAATAAAAATCTTGAACGGGACTCAATGTGGGTTCAGTAAACAAAAAC
TTATAGCGAATGATGATTCAAAGAGGTGCTTGGCTATGAAAAATTATACC
GACATTTTTCCGACTCGAGATTTATGTTTTGAAGGTGAGTCTGTTGGGTG
ACGCAAACGGAACATATTATTGATTGTTGCCTTGTTTTGAACAGTCCTGG
CTCAAAAATATTGTACTGCAAATTAAATATTCTTTCTCGTGCAGGACGAA
GGAAAATGATGACAACTTTTCAAAAAATCTCAAATAATGACAAATTTGTG
CGGCAGGTTTTTGACTGTCCTTACGATAAACGAATAAACATTAGATTAAT
TTCCATCAGCTTTGATAGTCCAGCAAGGACATTATACTGANTTGGGCGAT
CATCAAAATTATGTTCTGTTCGGCATCCATAAAACATCTTCAAATCCAGT
CGGTTGGTCGGTAGTATATTTCGTTGGGTTTTTAACATTTAGTAAATCTC
TAAATATTATGTCGGCAATCAACAAAATCTTTTGCAGCCATTTTTGAAAT
GTGCGCGCACATGTTAACCTTAAAAGCGAACCTTATTTTCAGCCCTCAGG
GTATCGGCCCCATTGCGTCGCTGAATTTCGACTTAAAAATTTCAATAAGG
GTGAATAAAAATCTTGAACGGGACTCAATGTGGGTTCAGTAAACAAAAAC
TTATAGCGAATGATGATTCAAAGAGGTGCTTGGCTATGAAAAATTATACC
GACATTTTTCCGACTCAGGATTTATGTTTTGAAGGTGAGTCTGTTGGGTG
ACGCAAACAGAACATATTATTGATTGTTGCCTTGTTTTGAACAGTCCTGG
CTCAAAAATATTGTACTGCAAATTAAATATTCTTTCTCGTGTAGGACGAA
GGAAAATGATGACAACTTTTCAAAAAATCTCAAATAATGACAAATTTGTG
CGGCAGGTTTTTGACTGTCCTTACGATAAACATTAGATTAATTTCCATCA
GCTTTGACATTCCAGCAAGGACATTATACTGATAATGTTTTACTTCCAAA
TCACATGATACTATTCTCATACTTTCAGCCTTGAAGTTGAAGATCGTGAG
ATTGAAGAAATTCTCCAACTGTCTACTGATCATATAAATACGAGTGGTGG
TAGTGCAACATCGAAAAGTACCCCAAAGTCAAAGTCTTCCAGTAAATATG
CAAACCTGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043784-exon-sc0004581-1575043694:2347..2417 | TCONS_00043784-exon-sc0004581-1575043694:2347..2417 | Clytia hemisphaerica | exon |
| TCONS_00043784-exon-sc0004581-1575043694:358..489 | TCONS_00043784-exon-sc0004581-1575043694:358..489 | Clytia hemisphaerica | exon |
| TCONS_00043784-exon-sc0004581-1510915933:2347..2417 | TCONS_00043784-exon-sc0004581-1510915933:2347..2417 | Clytia hemisphaerica | exon |
| TCONS_00043784-exon-sc0004581-1510915933:358..489 | TCONS_00043784-exon-sc0004581-1510915933:358..489 | Clytia hemisphaerica | exon |
| TCONS_00043784-exon-sc0004581-1491911889:2347..2417 | TCONS_00043784-exon-sc0004581-1491911889:2347..2417 | Clytia hemisphaerica | exon |
| TCONS_00043784-exon-sc0004581-1491911889:358..489 | TCONS_00043784-exon-sc0004581-1491911889:358..489 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004581 | supercontig | sc0004581:358..2417 - |
Blast
The following BLAST results are available for this feature:
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