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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043670 ID=TCONS_00043670|Name=TCONS_00043670|organism=Clytia hemisphaerica|type=transcript|length=706bp
aatttcgaatgttttgttttgattctttttcttgaaactttttAGTGAGC
CAATTTTAATGTGGTGCTCTTCAGTTTATAAAATGTTGGGATaagattat
tatttttgccactttcatttttaaggagcTTATGCTGAAAAGATGGAGCA
AAGACTTTTGATTGATCATTTTCAGGTTCGTACCCATAATCCTACTGGCC
CTctggaaaatgcaaaaataactgATTGTTCAAAGCAAGGTATGCTATTC
TTTGGTGTGTTTTAGGTACCACAAGACAACTTTATCATTGACGAATAATA
CACCCCTCtttcagtgacccggtgatAAATTCTTAACCACTTAGGAATGA
AATGAAGGACGTAATTGAGATAACATcagattaaagtttttggtTTCTTG
ACCCTCAATCCTGCTTTCTGTATTTATTTTAGGACGAGATTGAGATATTT
TAGGCTCTTTATCCAATTTTACTCTTGAATTTCTTGCAATTCAATTTCAG
CTTagcactgttcttaaattgttgtaGCTTCATTACTATCTATCATAAAA
AAGAGCTTGTAGTTATAAAGGTTTTGAGGGTTTTCTACTCTTTcccaaaa
tcaaaacttttctttcctCATTTTGTTTTCCAGATTCGATCAACACTATT
GCGTAAAACTAACTCGTCAGTCTAGCTGAACCAAAAGATCATCAACATGT
TACAGG Run BLAST on NCBI transcript from alignment at sc0004453:2873..4005- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043670 ID=TCONS_00043670|Name=TCONS_00043670|organism=Clytia hemisphaerica|type=transcript|length=1133bp|location=Sequence derived from alignment at sc0004453:2873..4005- (Clytia hemisphaerica)
AATTTCGAATGTTTTGTTTTGATTCTTTTTCTTGAAACTTTTTAGTGAGC
CAATTTTAATGTGGTGCTCTTCAGTTTATAAAATGTTGGGATAAGATTAT
TATTTTTGCCACTTTCATTTTTAAGGAGCTTATGCTGAAAAGATGGAGCA
AAGACTTTTGATTGATCATTTTCAGGTGAGTGAAATTTCTAAGACNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGA
AAATTCTGAAAATTAGATGGCATCATAACATAATGAGTTTCTAAAGTTTC
ATTTTTTTGATAAGTTCTTTGGGAAGCAAGTACAAATTTATTTTTTCTGA
AAAAACAGAGGAGACACGAAAATATTTTGTTCAAAAAGAGACCGGTGAAT
TGCAATTGTGACTTTTGATTGACAACAACCCACTTCTGTGGTGGAAGACG
TACAAAATTGGAGAAAGATTCTCGATCAAAAGGCGTTATTATTTAATCAA
AATAAGGGTCTTATTATATTTTCGTGTGGTATTGTATATATGGGTTTTCT
TTGAGAAACTTAAGTTTCATTCGTATCAGAATACCCTTACTTTACCTTTT
AGGTTCGTACCCATAATCCTACTGGCCCTCTGGAAAATGCAAAAATAACT
GATTGTTCAAAGCAAGGTATGCTATTCTTTGGTGTGTTTTAGGTACCACA
AGACAACTTTATCATTGACGAATAATACACCCCTCTTTCAGTGACCCGGT
GATAAATTCTTAACCACTTAGGAATGAAATGAAGGACGTAATTGAGATAA
CATCAGATTAAAGTTTTTGGTTTCTTGACCCTCAATCCTGCTTTCTGTAT
TTATTTTAGGACGAGATTGAGATATTTTAGGCTCTTTATCCAATTTTACT
CTTGAATTTCTTGCAATTCAATTTCAGCTTAGCACTGTTCTTAAATTGTT
GTAGCTTCATTACTATCTATCATAAAAAAGAGCTTGTAGTTATAAAGGTT
TTGAGGGTTTTCTACTCTTTCCCAAAATCAAAACTTTTCTTTCCTCATTT
TGTTTTCCAGATTCGATCAACACTATTGCGTAAAACTAACTCGTCAGTCT
AGCTGAACCAAAAGATCATCAACATGTTACAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043670-exon-sc0004453-1575043694:3831..4005 | TCONS_00043670-exon-sc0004453-1575043694:3831..4005 | Clytia hemisphaerica | exon |
| TCONS_00043670-exon-sc0004453-1575043694:2873..3403 | TCONS_00043670-exon-sc0004453-1575043694:2873..3403 | Clytia hemisphaerica | exon |
| TCONS_00043670-exon-sc0004453-1510915933:3831..4005 | TCONS_00043670-exon-sc0004453-1510915933:3831..4005 | Clytia hemisphaerica | exon |
| TCONS_00043670-exon-sc0004453-1510915933:2873..3403 | TCONS_00043670-exon-sc0004453-1510915933:2873..3403 | Clytia hemisphaerica | exon |
| TCONS_00043670-exon-sc0004453-1491911889:3831..4005 | TCONS_00043670-exon-sc0004453-1491911889:3831..4005 | Clytia hemisphaerica | exon |
| TCONS_00043670-exon-sc0004453-1491911889:2873..3403 | TCONS_00043670-exon-sc0004453-1491911889:2873..3403 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004453 | supercontig | sc0004453:2873..4005 - |
Blast
The following BLAST results are available for this feature:
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