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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043640 ID=TCONS_00043640|Name=TCONS_00043640|organism=Clytia hemisphaerica|type=transcript|length=990bp
AAAAAAACTGaggttgaaaatgaagaatctTTAAAGTCCTTACCATGTTT
GACTTTAGCTTTTCTTTTACTGACTTGTATAATGGTGGCAGGATAATAGT
AGTTATCATATAGTGCCAGAATGTCTTGATTGTCATGAAGTGATATTGTT
TCCATTTCAGGAATATGTTCCATGTCCTTAACGGAAAGATAAGCATAATT
TATTATAATAACCTTTTAACGATTGGTAAATGACTCAGACTGCATCTTTT
ACTCTTTGCATTAATTAATTTGCCTACTGTATAAAGTTGACGAAATAATC
CTTATTATCCATAATAATTCAAAAGAGACACAAAACAAGCTGGTCAGCTA
AAATAAGACTCAGCTATTCTTTCCTGGATAAGATGCCAGCTtggttttgt
atttttaaaagtGGCTGTACACCAGCACTttcaatttgttttcattttgg
cgcgtttgatagaccttttgctaggcCGGATGTCATGTTGagtataaaaa
ctccagcatcgAAAAAACATGACAACACGCCTAGCAAAAGATCTATTGTT
GAGGGAGCTTTTGAATTGTTATGGTTAGGTACCGTGaggtcaggtaactt
gcatcagtggagggtaacatgcataaccctcaaatgaatgacctggctgg
ccATTAAAATgtatcatttgttttgaaattttgctgcttcgattggtcag
tcatttgagggctatgcatgttagcctccactgatgcaagttacgcGATC
TTACGGTACTGCATATTCAGTATTCTGTTCAATATATATTTAGATGGTTT
GCTTTTTGGAATCATTTGGGAGAAAGCGACagtctattgaataactaatt
actccagcagAAATTTTGTTAGTGATAACGTCATATAATTGATTTGGCTC
TTACAACACATctgttacctagagacaagataattcaTCTGGTTTGTACT
GAGACAGTATATAACATAATCTTCCAGACTTACATCAGGT Run BLAST on NCBI transcript from alignment at sc0004425:883..1872 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043640 ID=TCONS_00043640|Name=TCONS_00043640|organism=Clytia hemisphaerica|type=transcript|length=990bp|location=Sequence derived from alignment at sc0004425:883..1872 (Clytia hemisphaerica)
ACCTGATGTAAGTCTGGAAGATTATGTTATATACTGTCTCAGTACAAACC
AGAtgaattatcttgtctctaggtaacagATGTGTTGTAAGAGCCAAATC
AATTATATGACGTTATCACTAACAAAATTTctgctggagtaattagttat
tcaatagactGTCGCTTTCTCCCAAATGATTCCAAAAAGCAAACCATCTA
AATATATATTGAACAGAATACTGAATATGCAGTACCGTAAGATCgcgtaa
cttgcatcagtggaggctaacatgcatagccctcaaatgactgaccaatc
gaagcagcaaaatttcaaaacaaatgatacATTTTAATggccagccaggt
cattcatttgagggttatgcatgttaccctccactgatgcaagttacctg
acctCACGGTACCTAACCATAACAATTCAAAAGCTCCCTCAACAATAGAT
CTTTTGCTAGGCGTGTTGTCATGTTTTTTcgatgctggagtttttatact
CAACATGACATCCGgcctagcaaaaggtctatcaaacgcgccaaaatgaa
aacaaattgaaAGTGCTGGTGTACAGCCacttttaaaaatacaaaaccaA
GCTGGCATCTTATCCAGGAAAGAATAGCTGAGTCTTATTTTAGCTGACCA
GCTTGTTTTGTGTCTCTTTTGAATTATTATGGATAATAAGGATTATTTCG
TCAACTTTATACAGTAGGCAAATTAATTAATGCAAAGAGTAAAAGATGCA
GTCTGAGTCATTTACCAATCGTTAAAAGGTTATTATAATAAATTATGCTT
ATCTTTCCGTTAAGGACATGGAACATATTCCTGAAATGGAAACAATATCA
CTTCATGACAATCAAGACATTCTGGCACTATATGATAACTACTATTATCC
TGCCACCATTATACAAGTCAGTAAAAGAAAAGCTAAAGTCAAACATGGTA
AGGACTTTAAagattcttcattttcaacctCAGTTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043640-exon-sc0004425-1491911889:883..1872 | TCONS_00043640-exon-sc0004425-1491911889:883..1872 | Clytia hemisphaerica | exon |
| TCONS_00043640-exon-sc0004425-1510915933:883..1872 | TCONS_00043640-exon-sc0004425-1510915933:883..1872 | Clytia hemisphaerica | exon |
| TCONS_00043640-exon-sc0004425-1575043694:883..1872 | TCONS_00043640-exon-sc0004425-1575043694:883..1872 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004425 | supercontig | sc0004425:883..1872 . |
Blast
The following BLAST results are available for this feature:
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