|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043612 ID=TCONS_00043612|Name=TCONS_00043612|organism=Clytia hemisphaerica|type=transcript|length=514bp
CAATGTAAGACAGATCTAGGTCGATATGGACCGGTCCAGGCCGATACAAC
CGGTCCAAAACGTTTTATGGAAGCCGAAATACTCATTAtaagcaaaattg
ttttcataCAGTTTTTTCATTGTAAATGACATACTCCCTCGTATTTCATA
ACCTTGACTCACTCGCTCTTATGAATACATTTAGAAAACATTGTTAGAAA
TCCTCCTTAGAATAGAACTACATTATGTCCGTTCGTTAGTTTATTTGGGC
ATCCCTGTATCATTTACATATTCAGACGGTGTTAATCGAATGAATCAAAC
GGTgaatcaattgaatgcaatccaacacaatcaaatattattacccagga
tttgccttTCGATTGAAAGATTACAttcaattgattcaattgtattttat
tttaatcACTCTCGTACCGTACTTAGGCGCTAAGTTGTCCACcctaaaaa
agctctaaaggagtgaTCAAATTTAATTCAATTACATCAATTGAAGGTAA
TTTACAATAATTGA Run BLAST on NCBI transcript from alignment at sc0004393:5821..6791- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043612 ID=TCONS_00043612|Name=TCONS_00043612|organism=Clytia hemisphaerica|type=transcript|length=971bp|location=Sequence derived from alignment at sc0004393:5821..6791- (Clytia hemisphaerica)
CAATGTAAGACAGATCTAGGTCGATATGGACCGGTCCAGGCCGATACAAC
CGGTCCAAAACGTTTTATGGAAGCCGAAATACTCATTATAAGCAAAATTG
TTTTCATACAGTTTTTTCATTGTAAATGACATACTCCCTCGTATTTCATA
ACCTTGACTCACTCGCTCTTATGAATACATTTCAGCCCTGTGAATTCAGA
CAAAATCATATCGGCACTTAAGTGCCGACCAAAACCGGCCATAGGCCGGC
AAAATTTTGCTGACCTAGAGGTCATTTTAGGTCGGCAAAGCCGTCCTAAG
TAGCTTGTTTAGGTCGGCAAAGACAAAATAGGAAGAAAATTAACGAACTA
TGAAATTCAGCTGCTCTATAATTGTGTTATTAAGTTTTATGTTTTATAAA
GAGAATGGAATGGGGCTCGATTATCATGAGTTATCAAATGATAACACAAT
TAGATTAACCTAACAAATAATATTTTTCCTCTTTAGGTCGGCTTTGCCGA
CCCAAAACATTTCTTTTGTCGGCACGCCGACCTTGAGTGTAAATTATGTC
GGCAAATAAAAGCCGACTTCAGCTCAAGTTACGTCGGCTTTCAAGTCGGC
ATTGCCGAATGCCGACCTGGATTCACAGGGCTGACATTTAGAAAACATTG
TTAGAAATCCTCCTTAGAATAGAACTACATTATGTCCGTTCGTTAGTTTA
TTTGGGCATCCCTGTATCATTTACATATTCAGACGGTGTTAATCGAATGA
ATCAAACGGTGAATCAATTGAATGCAATCCAACACAATCAAATATTATTA
CCCAGGATTTGCCTTTCGATTGAAAGATTACATTCAATTGATTCAATTGT
ATTTTATTTTAATCACTCTCGTACCGTACTTAGGCGCTAAGTTGTCCACC
CTAAAAAAGCTCTAAAGGAGTGATCAAATTTAATTCAATTACATCAATTG
AAGGTAATTTACAATAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043612-exon-sc0004393-1575043694:6614..6791 | TCONS_00043612-exon-sc0004393-1575043694:6614..6791 | Clytia hemisphaerica | exon |
| TCONS_00043612-exon-sc0004393-1575043694:5821..6156 | TCONS_00043612-exon-sc0004393-1575043694:5821..6156 | Clytia hemisphaerica | exon |
| TCONS_00043612-exon-sc0004393-1510915933:6614..6791 | TCONS_00043612-exon-sc0004393-1510915933:6614..6791 | Clytia hemisphaerica | exon |
| TCONS_00043612-exon-sc0004393-1510915933:5821..6156 | TCONS_00043612-exon-sc0004393-1510915933:5821..6156 | Clytia hemisphaerica | exon |
| TCONS_00043612-exon-sc0004393-1491911889:6614..6791 | TCONS_00043612-exon-sc0004393-1491911889:6614..6791 | Clytia hemisphaerica | exon |
| TCONS_00043612-exon-sc0004393-1491911889:5821..6156 | TCONS_00043612-exon-sc0004393-1491911889:5821..6156 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004393 | supercontig | sc0004393:5821..6791 - |
Blast
The following BLAST results are available for this feature:
|
