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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043605 ID=TCONS_00043605|Name=TCONS_00043605|organism=Clytia hemisphaerica|type=transcript|length=1406bp
AGGGAGTATAAGTTAATAGGGCTAAGTAGATCGGACGATGCGACGTGTAA
GCTGAGAAGCTGAGTTTTGTAAGCTGAGATGCTGAGATTAGGATGTGTGA
AGTAAACGTTTGCGTTTGGTGGGTTTCGCAAGTTTCGAACAGTTGGCAGG
TTTTGCACGTTTTGAACGTTAATAAGGGAGATAACGGCTGATGCAATAAC
GCCGACGCGCTATATGAAATCATTATGAAATTACAACGCATCCCGACGCA
CACATATCATTATAACCCGGTTGTCCAAAAATTGAATCGNCAACGCATCC
CGACGCACACATATCATTATAACCCGGTTGTCCAAAAATTGAATCGGGAA
AAAATCGGAGTTAAAACACAAATCCAAATGCGCTGCTGGAAAAAAAATCG
CGGAaccgatttgaagggtcaccggggctgaccaatTATGGTTAGTGTAC
GTGGCGTTCCCCATATAGGATGAAGGAGTTGAGTTGAGAACAATTTGgat
tgtatttttctcaaatgAAGATACTTTTTTGATTAACCCCTCCCAGTGGG
TATGACAGGTCCTACCACGTATGTGACAAGATGTTTTATTTGTACTCGAA
ACCCTCATGGGGAatacacaaatttgttctagtTAAGGGtgtttcgagtt
atggagtaattttttaaaggtatcgttaactgaagggaccagcaAACATT
TTCGATTTAAGGAGTCATTCGAGTTATAGGATAAAGGTTCGCTATGGAGg
gagtagcgtagacaggggtgaagaACGTTCTGCGTAGGAGGGCAGATTTT
AACGACAAAGTACTTATCTCTTCGTGGTATAAAAACATAATTACTGTGTG
GTTTAAATCTGTTCTCCTAAGCAAATGTTccttcacccctgtctacgcta
ctgggaGGCTACATTGTATAAAGCATCTTGATCGAATACCTAGCTTGTTT
AATTGAAATCTGGTTTTTACAACATCAAATCTGACGATCAATAAAAAACT
GGATCAATAATGAGATCAAAACAATTGATTAATGGCTGAATATATCAGAT
ATAAAAAGGTAGCAGTCTGATGTCAAGTCTTTATATGTTGATGAAAGGTC
CAAATTCTTGTTAGAGATATGCTAGAATTCATTTCGTTCATTTATCACCT
ATGATAGTTTGAAATTTGCTGAGCCGTAGATAAACATTTCTAAAAGTCTC
TATTTGATTGGATAAAGGGCCTATATTATGACGCAACCATATCAGAAAGA
GGGGGATATTTTAATAAACTTCAGGAGACTGGGCGCGAAAGGGAAACGGT
ATTTTATTGGTGCATTTTTCAAATAATGAAATAGCTTGTTTCAGatagaa
attaaaaatacattcaccTCAATGTGAAGTTACTTTTTGCCGATCAGCAA
AGATTG Run BLAST on NCBI transcript from alignment at sc0004388:5812..7217 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043605 ID=TCONS_00043605|Name=TCONS_00043605|organism=Clytia hemisphaerica|type=transcript|length=1406bp|location=Sequence derived from alignment at sc0004388:5812..7217 (Clytia hemisphaerica)
CAATCTTTGCTGATCGGCAAAAAGTAACTTCACATTGAggtgaatgtatt
tttaatttctatCTGAAACAAGCTATTTCATTATTTGAAAAATGCACCAA
TAAAATACCGTTTCCCTTTCGCGCCCAGTCTCCTGAAGTTTATTAAAATA
TCCCCCTCTTTCTGATATGGTTGCGTCATAATATAGGCCCTTTATCCAAT
CAAATAGAGACTTTTAGAAATGTTTATCTACGGCTCAGCAAATTTCAAAC
TATCATAGGTGATAAATGAACGAAATGAATTCTAGCATATCTCTAACAAG
AATTTGGACCTTTCATCAACATATAAAGACTTGACATCAGACTGCTACCT
TTTTATATCTGATATATTCAGCCATTAATCAATTGTTTTGATCTCATTAT
TGATCCAGTTTTTTATTGATCGTCAGATTTGATGTTGTAAAAACCAGATT
TCAATTAAACAAGCTAGGTATTCGATCAAGATGCTTTATACAATGTAGCC
tcccagtagcgtagacaggggtgaaggAACATTTGCTTAGGAGAACAGAT
TTAAACCACACAGTAATTATGTTTTTATACCACGAAGAGATAAGTACTTT
GTCGTTAAAATCTGCCCTCCTACGCAGAACGTtcttcacccctgtctacg
ctactccCTCCATAGCGAACCTTTATCCTATAACTCGAATGACTCCTTAA
ATCGAAAATGTTtgctggtcccttcagttaacgatacctttaaaaaatta
ctccataactcgaaacaCCCTTAactagaacaaatttgtgtatTCCCCAT
GAGGGTTTCGAGTACAAATAAAACATCTTGTCACATACGTGGTAGGACCT
GTCATACCCACTGGGAGGGGTTAATCAAAAAAGTATCTTcatttgagaaa
aatacaatcCAAATTGTTCTCAACTCAACTCCTTCATCCTATATGGGGAA
CGCCACGTACACTAACCATAattggtcagccccggtgacccttcaaatcg
gtTCCGCGATTTTTTTTCCAGCAGCGCATTTGGATTTGTGTTTTAACTCC
GATTTTTTCCCGATTCAATTTTTGGACAACCGGGTTATAATGATATGTGT
GCGTCGGGATGCGTTGNCGATTCAATTTTTGGACAACCGGGTTATAATGA
TATGTGTGCGTCGGGATGCGTTGTAATTTCATAATGATTTCATATAGCGC
GTCGGCGTTATTGCATCAGCCGTTATCTCCCTTATTAACGTTCAAAACGT
GCAAAACCTGCCAACTGTTCGAAACTTGCGAAACCCACCAAACGCAAACG
TTTACTTCACACATCCTAATCTCAGCATCTCAGCTTACAAAACTCAGCTT
CTCAGCTTACACGTCGCATCGTCCGATCTACTTAGCCCTATTAACTTATA
CTCCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043605-exon-sc0004388-1491911889:5812..7217 | TCONS_00043605-exon-sc0004388-1491911889:5812..7217 | Clytia hemisphaerica | exon |
| TCONS_00043605-exon-sc0004388-1510915933:5812..7217 | TCONS_00043605-exon-sc0004388-1510915933:5812..7217 | Clytia hemisphaerica | exon |
| TCONS_00043605-exon-sc0004388-1575043694:5812..7217 | TCONS_00043605-exon-sc0004388-1575043694:5812..7217 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004388 | supercontig | sc0004388:5812..7217 . |
Blast
The following BLAST results are available for this feature:
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