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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043538 ID=TCONS_00043538|Name=TCONS_00043538|organism=Clytia hemisphaerica|type=transcript|length=1216bp
attttggctgctgcacgttttattttgtttcagactttcaagttttaatt
aatttaatttagtttttttctcattcttgttgttgcaaatacatcctgta
gatgactgatgttgttttttcaatTACTCAACTGACATTTGACTTTGTGT
GCTTTTTGGAAAGGCTTTTTGGGTACCTTCGAGTAGCTTCTGTATGATAT
TTACACATCCATCCTGTCAGGACTaacataccgtgagatcgggtaacttg
catcagtggagggaaacccAACTTCACGGTATTCTTTCATGTTAATTATG
CTATTTGATATTTGATCTTATCATTATGATGTAACCTAGGCATGAGTGGC
TCGTCTGGAATCCTAAACAGATATTTGTCCAGCTCAGTTTTGGAATTCTT
TTTGCCACACCCTGTGAGATCCATCAAGACTTGGtcagtctaagcttaaa
ctcctatatcaggattagaaactaggctagtcttacctcttttatctttc
cctttacagCAATAGTAAAATCGTGAAActactgaaaatgaaattaaaat
cgGCCCGCACTCCAAGTCCagtaatcttgatataggagtttaagcatAGA
CTGTTGGTCTGGTTGGTCCTTGCACTTTGAAACTTGTATAGATGGCTCTT
TGCCAGGGTGGTTTTATTAATGGAATATGGCATTTTCTTCCGTGTCTAGG
ATTGTGATCAATGACATATAGGTAATTGTCCCAGTATTTGGGGCCAAGTT
CTCTATTACACACCAGGTGTATATTGATGGGCGGTGTATATTATGACATA
TGATGTATCATATTCTCTATGTCTTTGAAGTGAGAACAGTTTGAGTGTTT
TCAGTTGTTTAGAGTGTTTCAAGTAATCTTGGTTGTGGAGGTTTTGATTT
TGTGAATGATTTCTGGTCATCCTCAATTTGTCGGATTAGTTTTGCTTCAT
TTGGTGACCATAGCTGCATAATTTTTTGTGTTGAACCTTCTCATGATCCA
ACCAACCATAGTTTTGTGCTTTTTCAACAATATTTGTTATATgctactag
acggttcccgttgTCGCAAATGCCTAGTTTAGTTATgcatcaaaagccct
taggatgataAAGCTCAAATTTAAGGCTTGTTAGACAGATTGAACTCTTA
GCTTTCTCAGACACTAATTTTGTGATTGGcccttttgatttgtcaacaGC
GACGTGGGAAGAAACG Run BLAST on NCBI transcript from alignment at sc0004332:1036..2251 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043538 ID=TCONS_00043538|Name=TCONS_00043538|organism=Clytia hemisphaerica|type=transcript|length=1216bp|location=Sequence derived from alignment at sc0004332:1036..2251 (Clytia hemisphaerica)
CGTTTCTTCCCACGTCGCtgttgacaaatcaaaagggCCAATCACAAAAT
TAGTGTCTGAGAAAGCTAAGAGTTCAATCTGTCTAACAAGCCTTAAATTT
GAGCTTtatcatcctaagggcttttgatgcATAACTAAACTAGGCATTTG
CGAcaacgggaaccgtctagtagcATATAACAAATATTGTTGAAAAAGCA
CAAAACTATGGTTGGTTGGATCATGAGAAGGTTCAACACAAAAAATTATG
CAGCTATGGTCACCAAATGAAGCAAAACTAATCCGACAAATTGAGGATGA
CCAGAAATCATTCACAAAATCAAAACCTCCACAACCAAGATTACTTGAAA
CACTCTAAACAACTGAAAACACTCAAACTGTTCTCACTTCAAAGACATAG
AGAATATGATACATCATATGTCATAATATACACCGCCCATCAATATACAC
CTGGTGTGTAATAGAGAACTTGGCCCCAAATACTGGGACAATTACCTATA
TGTCATTGATCACAATCCTAGACACGGAAGAAAATGCCATATTCCATTAA
TAAAACCACCCTGGCAAAGAGCCATCTATACAAGTTTCAAAGTGCAAGGA
CCAACCAGACCAACAGTCTatgcttaaactcctatatcaagattactGGA
CTTGGAGTGCGGGCcgattttaatttcattttcagtagTTTCACGATTTT
ACTATTGctgtaaagggaaagataaaagaggtaagactagcctagtttct
aatcctgatataggagtttaagcttagactgaCCAAGTCTTGATGGATCT
CACAGGGTGTGGCAAAAAGAATTCCAAAACTGAGCTGGACAAATATCTGT
TTAGGATTCCAGACGAGCCACTCATGCCTAGGTTACATCATAATGATAAG
ATCAAATATCAAATAGCATAATTAACATGAAAGAATACCGTGAAGTTggg
tttccctccactgatgcaagttacccgatctcacggtatgttAGTCCTGA
CAGGATGGATGTGTAAATATCATACAGAAGCTACTCGAAGGTACCCAAAA
AGCCTTTCCAAAAAGCACACAAAGTCAAATGTCAGTTGAGTAattgaaaa
aacaacatcagtcatctacaggatgtatttgcaacaacaagaatgagaaa
aaaactaaattaaattaattaaaacttgaaagtctgaaacaaaataaaac
gtgcagcagccaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043538-exon-sc0004332-1491911889:1036..2251 | TCONS_00043538-exon-sc0004332-1491911889:1036..2251 | Clytia hemisphaerica | exon |
| TCONS_00043538-exon-sc0004332-1510915933:1036..2251 | TCONS_00043538-exon-sc0004332-1510915933:1036..2251 | Clytia hemisphaerica | exon |
| TCONS_00043538-exon-sc0004332-1575043694:1036..2251 | TCONS_00043538-exon-sc0004332-1575043694:1036..2251 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004332 | supercontig | sc0004332:1036..2251 . |
Blast
The following BLAST results are available for this feature:
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