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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043535 ID=TCONS_00043535|Name=TCONS_00043535|organism=Clytia hemisphaerica|type=transcript|length=995bp
TTTCAGTTAGTTTACCTGGCTTTATGTTTGTTCAGATGAAAAGTATTCGG
TTTAATATCACTCATTTGATTTCGACATaacttttttcaattcatttaga
tgtaaaatatatatataatataaaaaaacatcaaaataatcaaCCATAAA
TTCTGTATATATCCTGCTCCTTGAAAAGGCATTTCAAAAACAGATGGGTG
ACCTCAAATCAAGGATATCTTCAACAGACAAGATGTATTGTGATTAGAAT
ATATACATCTAGCACccaatgctgaaaaatattttgtcgcgatgatgttt
tttgaataatcataactttaattttctggctattttattaTAACACCGAA
TCAATTTGTCACTGGATGGATTCTTTGCACTTTGGATATTTTGATATATG
TGGCTTGGCTGGTAGACTTGGTAGATTAGAATTATCAACAGCGATGATGA
AAAGATTGAGTAGTGCTACTAACATAACAATATTtggaatatcttaaaat
ttggaTAATGTATGTTCACACTGTCACTAGAGACAGAGCTCACAGCAGGC
TACAAACTGAAATTGTGAGGGTTATTGCATTAGtatatatatgaaaatat
ttggtACCCCAACCGTAAAATTGTGATGTATGCCATTTGTAGAAAGTGGA
CTAAAATATACAATTGATTATGCATGGGTCATTGACTAAATAAGCGAACT
GCCATCCCATGGACAGAATCTgagatttacaaaaataatgtaCATTCAAT
TGTTATTATTGTTAGTATTGAAAGCTTGGATATTGCTTTTAAAACAGTGT
GCCAGATTTTTAATTTGGCAAGACTGGTTTCTGGCAAATTAAAAAACTAT
TGCTTACAGTAGATGATCTTGAACAAATTTATATAGATGAATTCTTTGGC
TAGgtaattttaacaaattatagAAAGCAAACAGAAGCAAACTATATTCT
AAATTAATCAGTCAGTCatcataatgaaattaattttgagagGTA Run BLAST on NCBI transcript from alignment at sc0004327:3326..4320 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043535 ID=TCONS_00043535|Name=TCONS_00043535|organism=Clytia hemisphaerica|type=transcript|length=995bp|location=Sequence derived from alignment at sc0004327:3326..4320 (Clytia hemisphaerica)
TACctctcaaaattaatttcattatgatGACTGACTGATTAATTTAGAAT
ATAGTTTGCTTCTGTTTGCTTTctataatttgttaaaattacCTAGCCAA
AGAATTCATCTATATAAATTTGTTCAAGATCATCTACTGTAAGCAATAGT
TTTTTAATTTGCCAGAAACCAGTCTTGCCAAATTAAAAATCTGGCACACT
GTTTTAAAAGCAATATCCAAGCTTTCAATACTAACAATAATAACAATTGA
ATGtacattatttttgtaaatctcAGATTCTGTCCATGGGATGGCAGTTC
GCTTATTTAGTCAATGACCCATGCATAATCAATTGTATATTTTAGTCCAC
TTTCTACAAATGGCATACATCACAATTTTACGGTTGGGGTaccaaatatt
ttcatatatataCTAATGCAATAACCCTCACAATTTCAGTTTGTAGCCTG
CTGTGAGCTCTGTCTCTAGTGACAGTGTGAACATACATTAtccaaatttt
aagatattccaAATATTGTTATGTTAGTAGCACTACTCAATCTTTTCATC
ATCGCTGTTGATAATTCTAATCTACCAAGTCTACCAGCCAAGCCACATAT
ATCAAAATATCCAAAGTGCAAAGAATCCATCCAGTGACAAATTGATTCGG
TGTTAtaataaaatagccagaaaattaaagttatgattattcaaaaaaca
tcatcgcgacaaaatatttttcagcattggGTGCTAGATGTATATATTCT
AATCACAATACATCTTGTCTGTTGAAGATATCCTTGATTTGAGGTCACCC
ATCTGTTTTTGAAATGCCTTTTCAAGGAGCAGGATATATACAGAATTTAT
GGttgattattttgatgtttttttatattatatatatattttacatctaa
atgaattgaaaaaagttATGTCGAAATCAAATGAGTGATATTAAACCGAA
TACTTTTCATCTGAACAAACATAAAGCCAGGTAAACTAACTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043535-exon-sc0004327-1491911889:3326..4320 | TCONS_00043535-exon-sc0004327-1491911889:3326..4320 | Clytia hemisphaerica | exon |
| TCONS_00043535-exon-sc0004327-1510915933:3326..4320 | TCONS_00043535-exon-sc0004327-1510915933:3326..4320 | Clytia hemisphaerica | exon |
| TCONS_00043535-exon-sc0004327-1575043694:3326..4320 | TCONS_00043535-exon-sc0004327-1575043694:3326..4320 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004327 | supercontig | sc0004327:3326..4320 . |
Blast
The following BLAST results are available for this feature:
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