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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043414 ID=TCONS_00043414|Name=TCONS_00043414|organism=Clytia hemisphaerica|type=transcript|length=1003bp
GAAAGATTTATTGGTTTAGCGTATGTTGGGATCTCAAGAGTGAGAAAGCT
AAAAGATATGATAATCGAGCCAATGACATTAGAACGATTACAAGATAtta
agaaaaggaaaaattttaaatttcgagaatTAGAAGAACAGAAAATTAAC
GGTTTGGCACTAGAAACTGAGACAAGATTGATTTGATAAGGGTGTACATT
GATGAGAACTAAACGTTTTTAATGACTGGGTGGGTGGTaatacattttca
aaattgtaaatAATGATTTTTCTATTTAAAGCTCGATATCTAATGAATGT
CACAAACACAATTCAATGATGCTTTTACATGATTTTTCCTGAAGGTCATT
TTCAAAGCTTATTCATCAAAACAAGAAATTATTTCAATCATCAACCTTCG
TAACGTTAATTTATAACTCGACCTTCGCTGATTCGTTATCATGTTCTTAC
TTTATTGTTACCTGTTACCTTTTTGCTATTTGTTCAACCATTTCCCTTGA
TGTCCTGGTGTATGTGTCTGTTCAAATCAATTTCTTATATTGCCTACACG
ATTGCTGTATTTGGATCTACAACTTATTACCAATAGATTAGATTCAATGA
AACCTAAACTTTATAAATCTTGCAATGGTGCTGACTTCTGACTTACATGT
TGCTGATACAATGGCGGCTTTTTACCTGGTTGTATGCTTGTGTTCTTGGT
CGTTTAACTGTTAAATATCAAGCCATACAATGGGGTCTTTGGAAATTGAA
TTGTGTTGAGACGGACTATTTTAAAGCAGGAAGCATATTTTTATAAAGAG
TTCTTTACATTTTAAACGATAATATTTTACACGAAAAATACCAATCTTAT
TATAATACATACATCTTATACAGTACTActtggaatttctttttttttac
atctactcttgttatatttttataagGGTCTTTTTAATCAGCTTCAACTT
AGCCAAGTTCTATTTTTGAGTCTCAAATATGCTTATGTAGAACGTGTTGC
AAC Run BLAST on NCBI transcript from alignment at sc0004208:1352..2728- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043414 ID=TCONS_00043414|Name=TCONS_00043414|organism=Clytia hemisphaerica|type=transcript|length=1377bp|location=Sequence derived from alignment at sc0004208:1352..2728- (Clytia hemisphaerica)
GAAAGATTTATTGGTTTAGCGTATGTTGGGATCTCAAGAGTGAGAAAGCT
AAAAGATATGATAATCGAGCCAATGACATTAGAACGATTACAAGATATTA
AGAAAAGGAAAAATTTTAAATTTCGAGAATTAGAAGAACAGAAAATTAAC
GGTTTGGCACTAGAAACTGAGACAAGATTGATTTGATAAGGGTGTACATT
GATGAGAACTAAACGTTTTTAATGACTGGGTGGGTGGTAATACATTTTCA
AAATTGTAAATAATGATTTTTCTATTTAAAGCTCGATATCTAATGAATGT
CACAAACACAATTCAATGATGCTTTTACATGATTTTTCCTGAAGGTAAGA
GTGGTAATTTTTTGGTTGTCATGAGTATTTGATTTTTTTATTTAGTTTGT
ACCAGAAAAAAGCACAATCAATTGCGACTCTTTTTGGGCCAATTTTCCAT
GACGTCATTTTTCAGTACAAAACCAATAGAAAATGATTTCAAAAAGACTT
CAAAAATAAATTTAAACTGGTTCATTAGAAAGACCTGGATAGAAAGAGTA
AATAATTAGAAAGAGTAGATAACGAAAATTGGGTTATTTGCCAAATTTCA
GCCACTTTATTTTCAAGGTAAAACCCTAATTCCCACATACTAGTTTCCTT
ATCAACTTGTTCGTATATGACTTTCTGACTTAACAAATAAGTGGCTTGAT
TTTCTTTCCCTTTTTTAGGTCATTTTCAAAGCTTATTCATCAAAACAAGA
AATTATTTCAATCATCAACCTTCGTAACGTTAATTTATAACTCGACCTTC
GCTGATTCGTTATCATGTTCTTACTTTATTGTTACCTGTTACCTTTTTGC
TATTTGTTCAACCATTTCCCTTGATGTCCTGGTGTATGTGTCTGTTCAAA
TCAATTTCTTATATTGCCTACACGATTGCTGTATTTGGATCTACAACTTA
TTACCAATAGATTAGATTCAATGAAACCTAAACTTTATAAATCTTGCAAT
GGTGCTGACTTCTGACTTACATGTTGCTGATACAATGGCGGCTTTTTACC
TGGTTGTATGCTTGTGTTCTTGGTCGTTTAACTGTTAAATATCAAGCCAT
ACAATGGGGTCTTTGGAAATTGAATTGTGTTGAGACGGACTATTTTAAAG
CAGGAAGCATATTTTTATAAAGAGTTCTTTACATTTTAAACGATAATATT
TTACACGAAAAATACCAATCTTATTATAATACATACATCTTATACAGTAC
TACTTGGAATTTCTTTTTTTTTACATCTACTCTTGTTATATTTTTATAAG
GGTCTTTTTAATCAGCTTCAACTTAGCCAAGTTCTATTTTTGAGTCTCAA
ATATGCTTATGTAGAACGTGTTGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043414-exon-sc0004208-1575043694:2385..2728 | TCONS_00043414-exon-sc0004208-1575043694:2385..2728 | Clytia hemisphaerica | exon |
| TCONS_00043414-exon-sc0004208-1575043694:1352..2010 | TCONS_00043414-exon-sc0004208-1575043694:1352..2010 | Clytia hemisphaerica | exon |
| TCONS_00043414-exon-sc0004208-1510915933:2385..2728 | TCONS_00043414-exon-sc0004208-1510915933:2385..2728 | Clytia hemisphaerica | exon |
| TCONS_00043414-exon-sc0004208-1510915933:1352..2010 | TCONS_00043414-exon-sc0004208-1510915933:1352..2010 | Clytia hemisphaerica | exon |
| TCONS_00043414-exon-sc0004208-1491911889:2385..2728 | TCONS_00043414-exon-sc0004208-1491911889:2385..2728 | Clytia hemisphaerica | exon |
| TCONS_00043414-exon-sc0004208-1491911889:1352..2010 | TCONS_00043414-exon-sc0004208-1491911889:1352..2010 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004208 | supercontig | sc0004208:1352..2728 - |
Blast
The following BLAST results are available for this feature:
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