TCONS_00043406 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043406
Unique NameTCONS_00043406
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043406 ID=TCONS_00043406|Name=TCONS_00043406|organism=Clytia hemisphaerica|type=transcript|length=125bp
TAAGTCGGTGGTTTACTACGTCATCTCAGTCATCTTGTCGATTTTTACAT
TGCCTTCAGTCAATAACATTAGCTAGTAATTTGATAATTAGCTAGTAATT
TGTATAATTCTCATCAAGGAACTGA
Run BLAST on NCBI

transcript from alignment at sc0004200:5946..6070

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043406 ID=TCONS_00043406|Name=TCONS_00043406|organism=Clytia hemisphaerica|type=transcript|length=125bp|location=Sequence derived from alignment at sc0004200:5946..6070 (Clytia hemisphaerica)
TCAGTTCCTTGATGAGAATTATACAAATTACTAGCTAATTATCAAATTAC
TAGCTAATGTTATTGACTGAAGGCAATGTAAAAATCGACAAGATGACTGA
GATGACGTAGTAAACCACCGACTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027106XLOC_027106Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043406-exon-sc0004200-1491911889:5946..6070TCONS_00043406-exon-sc0004200-1491911889:5946..6070Clytia hemisphaericaexon
TCONS_00043406-exon-sc0004200-1510915933:5946..6070TCONS_00043406-exon-sc0004200-1510915933:5946..6070Clytia hemisphaericaexon
TCONS_00043406-exon-sc0004200-1575043694:5946..6070TCONS_00043406-exon-sc0004200-1575043694:5946..6070Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004200supercontigsc0004200:5946..6070 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043406 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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