TCONS_00043248 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043248
Unique NameTCONS_00043248
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1952

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043248 ID=TCONS_00043248|Name=TCONS_00043248|organism=Clytia hemisphaerica|type=transcript|length=1952bp
ATGAGTGACAGCCATTTGACTCTAGAGAAAATTTCAATCGAAGAATTTCG
TTTGTATTCTCTAACTGCTTTGAAAAGTTTCCTTTCAAttcgaaaaaaat
caacaactgGTTCTATTGACACACTTATTGCAAGAGCTTTTGCTGCAGCC
GAAGAGAATATACCAATCGACCCAGAATTGGAGCATCAGGAAAGAGCTAA
TACTGAAGAATATACAAAGAAATTTACAACTTTGTCTGTAGATGATCCAT
TTTCTATTCCACATAACGAATGGCTTGACGAAAAAGATGCAATCCATAAG
TGGCCAAAAACATACTTTATGGACATTTCTAGATATTTTTCGCAAGTTCT
CGGGAATGACAATTTATGGCAACGTTTGGAATGCGAGTACAAAGAAGGAA
AGGCATATCGCTATTACAGTGATGGATTTCTCGGAGAACTtcaaatcaca
tttccaaagcAGAATCCTAATGTTTGTGTGATGAGATGTAAATGTTTACC
ATCCCAACGAGTTTCGATGAAACAATATGATGTGTGGGCCATAATACAGC
AGAAGGACACAGACAACGAGATTGATGGACAAATTTTAAGAGGATATTGT
ACCTGTACAGCAGGCCTGTTAGgaAGCTGTAATCATGTTGCTGGATTATT
GTTTCGTCTTGAAATTGCAAACCTCTTGGGGGAAACCAGAAAAACATGTA
CTTCAGTTCGCAGTAAATATATGGAACCTTCTTcgtcaaagaaaaaaaca
atcaaaccaGGAAAACTCTCTTCTTTTGTATTCAGACAAGACAATTATAG
TAAACTTGCaatctcaaaaacaaaagaggATAGTaagaaaatcttgaaaa
gaaaattagaatATATGCCCATGAGCAGTAGTATCACTAACACACAACTT
GTTTCCAACccgaaaaaaatgagaaaaatgttttttgactcATTCAAAGA
TGTAGACCCTGACAGCTGTTTTATTCAGATGATGGAAGGAAAACCCATTA
TTGTCAACAAAGAAGAAACTCAAAATTCGGAAATCCTATCTCTAAAGGAA
CATGCCAAAATATTCAAAGATAACAATTGTTATGACCATGAGAAATATCT
CCAAGCTATTTCGTTGACTGATgaccaaataacaaaaatttatgaaaaaa
ctgTGTCACAAAGTAATTCAAAGTTCTGGTTCGAACaaagaaaaggaaga
ataaCAGCgtccaattttaagaaaatctaTACAAGAATGGAGTCTTTGAA
AACATCTGATGAAGATCCGATCCCACTACTCAAAGATGTAATGGGGGAAA
GCAGCAGACGTGCTACATGGTCAATGAAGCATGGCATATCTTCAGAACGG
CATGCCATAATGAGACTCAAACAAGTCATACGTCTCAAACACCGTGGCAT
TAAATTCACAAACCCTGGAATGACTGTTTCAAAGGAATACCCATACATCA
GTGCCACACCAGACTTGGAGTTCGAATGTCCATGTTGTGGAAAAGGAGTT
TGTGAGGTAAAATGTCCAACAAGTGTTCCTTTAACTAGAGCACCATCATG
GAGAACATACGGAAAGCATTTAGAAAATCGAAATGggtcaaaattaaaaa
ctacAAGTCCTTACTATTTCCAGATCCAAGGACAGATGGCTGTGACAAAT
CgatattttggttatttttttattttcaacattgcAAACAGAAGTTTTCA
TCTAGAAAAAATCGACTTTAGTCCATCGTTTTGGAAGGAAGTATTGTCAA
ACCTCAAGCTATTCTGGAACTCTTTTGTTTTTCCAAGACTCCTCATCACA
ACCATACCAAAATCTGAGCCAATAGTAACAGATAGTGAGAACTCAAATGT
TAACAATAGTGATATGGACATCAAGATGATTTTAGCTCAGGAATCTTTAA
ACATCACCTTTGATAAATAAATCCATAACACATCATGGACATTTCTATTT
TG
Run BLAST on NCBI

protein sequence of TCONS_00043248-protein

>TCONS_00043248-protein ID=TCONS_00043248-protein|Name=TCONS_00043248-protein|organism=Clytia hemisphaerica|type=polypeptide|length=639bp
MSDSHLTLEKISIEEFRLYSLTALKSFLSIRKKSTTGSIDTLIARAFAAA
EENIPIDPELEHQERANTEEYTKKFTTLSVDDPFSIPHNEWLDEKDAIHK
WPKTYFMDISRYFSQVLGNDNLWQRLECEYKEGKAYRYYSDGFLGELQIT
FPKQNPNVCVMRCKCLPSQRVSMKQYDVWAIIQQKDTDNEIDGQILRGYC
TCTAGLLGSCNHVAGLLFRLEIANLLGETRKTCTSVRSKYMEPSSSKKKT
IKPGKLSSFVFRQDNYSKLAISKTKEDSKKILKRKLEYMPMSSSITNTQL
VSNPKKMRKMFFDSFKDVDPDSCFIQMMEGKPIIVNKEETQNSEILSLKE
HAKIFKDNNCYDHEKYLQAISLTDDQITKIYEKTVSQSNSKFWFEQRKGR
ITASNFKKIYTRMESLKTSDEDPIPLLKDVMGESSRRATWSMKHGISSER
HAIMRLKQVIRLKHRGIKFTNPGMTVSKEYPYISATPDLEFECPCCGKGV
CEVKCPTSVPLTRAPSWRTYGKHLENRNGSKLKTTSPYYFQIQGQMAVTN
RYFGYFFIFNIANRSFHLEKIDFSPSFWKEVLSNLKLFWNSFVFPRLLIT
TIPKSEPIVTDSENSNVNNSDMDIKMILAQESLNITFDK
Run BLAST on NCBI

transcript from alignment at sc0004063:8864..11592+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043248 ID=TCONS_00043248|Name=TCONS_00043248|organism=Clytia hemisphaerica|type=transcript|length=2729bp|location=Sequence derived from alignment at sc0004063:8864..11592+ (Clytia hemisphaerica)
ATGAGTGACAGCCATTTGACTCTAGAGAAAATTTCAATCGAAGAATTTCG TTTGTATTCTCTAACTGCTTTGAAAAGTTTCCTTTCAAttcgaaaaaaat caacaactgGTTCTATTGACACACTTATTGCAAGGTAAAGATTAATTAAA GCATATTATATGTTGTTTCTCCATCTCTGTCATCTGTCTGTGGCTGTTTT TCAGTTCATATTTCTTTTATACCATTCAAGTGAAATTATTTTCAGATGGC TGACTGTCATGCATCATCAGTTTGTAATGTTATTTTCCCAATAAAGTAGG TGAAGTAGTCTTAAGAAATAGAGAAAAGGCAAACATGATGACTGGTTAAC TGTTCATTTTTCAAGCTTTTAATTTGAAATAATCTGACCACATGGTCAAC AAGAAGGTAAAAATAGTGGCCTTTTCTGTCTGAATAAGGCAAAATCAGAT TTTCCTTTCCTTTATTTCCATCAGAGCTTTTGCTGCAGCCGAAGAGAATA TACCAATCGACCCAGAATTGGAGCATCAGGAAAGAGCTAATACTGAAGAA TATACAAAGAAATTTACAACTTTGTCTGTAGATGATCCATTTTCTATTCC ACATAACGAATGGCTTGACGAAAAAGATGCAATCCATAAGTGGCCAAAAA CATACTTTATGGACATTTCTAGATATTTTTCGCAAGTTCTCGGGAATGAC AATTTATGGCAACGTTTGGAATGCGAGTACAAAGAAGGAAAGGCATATCG CTATTACAGTGATGGATTTCTCGGAGAACTtcaaatcacatttccaaagc AGAATCCTAATGTTTGTGTGATGAGATGTAAATGTTTACCATCCCAACGA GTTTCGATGAAACAATATGATGTGTGGGCCATAATACAGCAGAAGGACAC AGACAACGAGATTGATGGACAAATTTTAAGAGGATATTGTACCTGTACAG CAGGCCTGTTAGGTAAAATTTTTTATACTTTCTAAATCAAACTGAAAGCa ttgaaaaattattggaaCCAAGATTGTTCTAATAACTATTTTGCTAAAAA TCTAAAAGTGTACAAAGAGTACATTGAGTACATTTTGACAGCATTGTTTT TGGTTTAAGCAATTATCTTTGTCATGGTAGATTACTGTACTAGTCCAGAT GATGAGAGGATCAAGGTTCAACTCCTGGCCACTGGCATTTACAAATAATT TTTATACcgttaaaaacttttttggcacATAGGTAGTTGCATATGTATTT TGATTAGCCTAGCCTTAAGGTGGTCTCCTTCCTTTTATTTTTGTCGATAC TGCCTTGTGTATCAATTTTTGAAGTGTTTTGAAATGgtaaataaaaagtt acttacTTAATTACTTATTTATTTGCttatttatcaattttattttaagg aAGCTGTAATCATGTTGCTGGATTATTGTTTCGTCTTGAAATTGCAAACC TCTTGGGGGAAACCAGAAAAACATGTACTTCAGTTCGCAGTAAATATATG GAACCTTCTTcgtcaaagaaaaaaacaatcaaaccaGGAAAACTCTCTTC TTTTGTATTCAGACAAGACAATTATAGTAAACTTGCaatctcaaaaacaa aagaggATAGTaagaaaatcttgaaaagaaaattagaatATATGCCCATG AGCAGTAGTATCACTAACACACAACTTGTTTCCAACccgaaaaaaatgag aaaaatgttttttgactcATTCAAAGATGTAGACCCTGACAGCTGTTTTA TTCAGATGATGGAAGGAAAACCCATTATTGTCAACAAAGAAGAAACTCAA AATTCGGAAATCCTATCTCTAAAGGAACATGCCAAAATATTCAAAGATAA CAATTGTTATGACCATGAGAAATATCTCCAAGCTATTTCGTTGACTGATg accaaataacaaaaatttatgaaaaaactgTGTCACAAAGTAATTCAAAG TTCTGGTTCGAACaaagaaaaggaagaataaCAGCgtccaattttaagaa aatctaTACAAGAATGGAGTCTTTGAAAACATCTGATGAAGATCCGATCC CACTACTCAAAGATGTAATGGGGGAAAGCAGCAGACGTGCTACATGGTCA ATGAAGCATGGCATATCTTCAGAACGGCATGCCATAATGAGACTCAAACA AGTCATACGTCTCAAACACCGTGGCATTAAATTCACAAACCCTGGAATGA CTGTTTCAAAGGAATACCCATACATCAGTGCCACACCAGACTTGGAGTTC GAATGTCCATGTTGTGGAAAAGGAGTTTGTGAGGTAAAATGTCCAACAAG TGTTCCTTTAACTAGAGCACCATCATGGAGAACATACGGAAAGCATTTAG AAAATCGAAATGggtcaaaattaaaaactacAAGTCCTTACTATTTCCAG ATCCAAGGACAGATGGCTGTGACAAATCgatattttggttatttttttat tttcaacattgcAAACAGAAGTTTTCATCTAGAAAAAATCGACTTTAGTC CATCGTTTTGGAAGGAAGTATTGTCAAACCTCAAGCTATTCTGGAACTCT TTTGTTTTTCCAAGACTCCTCATCACAACCATACCAAAATCTGAGCCAAT AGTAACAGATAGTGAGAACTCAAATGTTAACAATAGTGATATGGACATCA AGATGATTTTAGCTCAGGAATCTTTAAACATCACCTTTGATAAATAAATC CATAACACATCATGGACATTTCTATTTTG

Coding sequence (CDS) from alignment at sc0004063:8864..11592+

>TCONS_00043248 ID=TCONS_00043248|Name=TCONS_00043248|organism=Clytia hemisphaerica|type=CDS|length=5760bp|location=Sequence derived from alignment at sc0004063:8864..11592+ (Clytia hemisphaerica)
ATGAGTGACAGCCATTTGACTCTAGAGAAAATTTCAATCGAAGAATTTCG
TTTGTATTCTCTAACTGCTTTGAAAAGTTTCCTTTCAAttcgaaaaaaat
caacaactgGTTCTATTGACACACTTATTGCAAGAGCTTTTGCTGCAGCC
GAAGAGAATATACCAATCGACCCAGAATTGGAGCATCAGGAAAGAGCTAA
TACTGAAGAATATACAAAGAAATTTACAACTTTGTCTGTAGATGATCCAT
TTTCTATTCCACATAACGAATGGCTTGACGAAAAAGATGCAATCCATAAG
TGGCCAAAAACATACTTTATGGACATTTCTAGATATTTTTCGCAAGTTCT
CGGGAATGACAATTTATGGCAACGTTTGGAATGCGAGTACAAAGAAGGAA
AGGCATATCGCTATTACAGTGATGGATTTCTCGGAGAACTtcaaatcaca
tttccaaagcAGAATCCTAATGTTTGTGTGATGAGATGTAAATGTTTACC
ATCCCAACGAGTTTCGATGAAACAATATGATGTGTGGGCCATAATACAGC
AGAAGGACACAGACAACGAGATTGATGGACAAATTTTAAGAGGATATTGT
ACCTGTACAGCAGGCCTGTTAGgaAGCTGTAATCATGTTGCTGGATTATT
GTTTCGTCTTGAAATTGCAAACCTCTTGGGGGAAACCAGAAAAACATGTA
CTTCAGTTCGCAGTAAATATATGGAACCTTCTTcgtcaaagaaaaaaaca
atcaaaccaGGAAAACTCTCTTCTTTTGTATTCAGACAAGACAATTATAG
TAAACTTGCaatctcaaaaacaaaagaggATAGTaagaaaatcttgaaaa
gaaaattagaatATATGCCCATGAGCAGTAGTATCACTAACACACAACTT
GTTTCCAACccgaaaaaaatgagaaaaatgttttttgactcATTCAAAGA
TGTAGACCCTGACAGCTGTTTTATTCAGATGATGGAAGGAAAACCCATTA
TTGTCAACAAAGAAGAAACTCAAAATTCGGAAATCCTATCTCTAAAGGAA
CATGCCAAAATATTCAAAGATAACAATTGTTATGACCATGAGAAATATCT
CCAAGCTATTTCGTTGACTGATgaccaaataacaaaaatttatgaaaaaa
ctgTGTCACAAAGTAATTCAAAGTTCTGGTTCGAACaaagaaaaggaaga
ataaCAGCgtccaattttaagaaaatctaTACAAGAATGGAGTCTTTGAA
AACATCTGATGAAGATCCGATCCCACTACTCAAAGATGTAATGGGGGAAA
GCAGCAGACGTGCTACATGGTCAATGAAGCATGGCATATCTTCAGAACGG
CATGCCATAATGAGACTCAAACAAGTCATACGTCTCAAACACCGTGGCAT
TAAATTCACAAACCCTGGAATGACTGTTTCAAAGGAATACCCATACATCA
GTGCCACACCAGACTTGGAGTTCGAATGTCCATGTTGTGGAAAAGGAGTT
TGTGAGGTAAAATGTCCAACAAGTGTTCCTTTAACTAGAGCACCATCATG
GAGAACATACGGAAAGCATTTAGAAAATCGAAATGggtcaaaattaaaaa
ctacAAGTCCTTACTATTTCCAGATCCAAGGACAGATGGCTGTGACAAAT
CgatattttggttatttttttattttcaacattgcAAACAGAAGTTTTCA
TCTAGAAAAAATCGACTTTAGTCCATCGTTTTGGAAGGAAGTATTGTCAA
ACCTCAAGCTATTCTGGAACTCTTTTGTTTTTCCAAGACTCCTCATCACA
ACCATACCAAAATCTGAGCCAATAGTAACAGATAGTGAGAACTCAAATGT
TAACAATAGTGATATGGACATCAAGATGATTTTAGCTCAGGAATCTTTAA
ACATCACCTTTGATAAATAAATGAGTGACAGCCATTTGACTCTAGAGAAA
ATTTCAATCGAAGAATTTCGTTTGTATTCTCTAACTGCTTTGAAAAGTTT
CCTTTCAAttcgaaaaaaatcaacaactgGTTCTATTGACACACTTATTG
CAAGAGCTTTTGCTGCAGCCGAAGAGAATATACCAATCGACCCAGAATTG
GAGCATCAGGAAAGAGCTAATACTGAAGAATATACAAAGAAATTTACAAC
TTTGTCTGTAGATGATCCATTTTCTATTCCACATAACGAATGGCTTGACG
AAAAAGATGCAATCCATAAGTGGCCAAAAACATACTTTATGGACATTTCT
AGATATTTTTCGCAAGTTCTCGGGAATGACAATTTATGGCAACGTTTGGA
ATGCGAGTACAAAGAAGGAAAGGCATATCGCTATTACAGTGATGGATTTC
TCGGAGAACTtcaaatcacatttccaaagcAGAATCCTAATGTTTGTGTG
ATGAGATGTAAATGTTTACCATCCCAACGAGTTTCGATGAAACAATATGA
TGTGTGGGCCATAATACAGCAGAAGGACACAGACAACGAGATTGATGGAC
AAATTTTAAGAGGATATTGTACCTGTACAGCAGGCCTGTTAGgaAGCTGT
AATCATGTTGCTGGATTATTGTTTCGTCTTGAAATTGCAAACCTCTTGGG
GGAAACCAGAAAAACATGTACTTCAGTTCGCAGTAAATATATGGAACCTT
CTTcgtcaaagaaaaaaacaatcaaaccaGGAAAACTCTCTTCTTTTGTA
TTCAGACAAGACAATTATAGTAAACTTGCaatctcaaaaacaaaagaggA
TAGTaagaaaatcttgaaaagaaaattagaatATATGCCCATGAGCAGTA
GTATCACTAACACACAACTTGTTTCCAACccgaaaaaaatgagaaaaatg
ttttttgactcATTCAAAGATGTAGACCCTGACAGCTGTTTTATTCAGAT
GATGGAAGGAAAACCCATTATTGTCAACAAAGAAGAAACTCAAAATTCGG
AAATCCTATCTCTAAAGGAACATGCCAAAATATTCAAAGATAACAATTGT
TATGACCATGAGAAATATCTCCAAGCTATTTCGTTGACTGATgaccaaat
aacaaaaatttatgaaaaaactgTGTCACAAAGTAATTCAAAGTTCTGGT
TCGAACaaagaaaaggaagaataaCAGCgtccaattttaagaaaatctaT
ACAAGAATGGAGTCTTTGAAAACATCTGATGAAGATCCGATCCCACTACT
CAAAGATGTAATGGGGGAAAGCAGCAGACGTGCTACATGGTCAATGAAGC
ATGGCATATCTTCAGAACGGCATGCCATAATGAGACTCAAACAAGTCATA
CGTCTCAAACACCGTGGCATTAAATTCACAAACCCTGGAATGACTGTTTC
AAAGGAATACCCATACATCAGTGCCACACCAGACTTGGAGTTCGAATGTC
CATGTTGTGGAAAAGGAGTTTGTGAGGTAAAATGTCCAACAAGTGTTCCT
TTAACTAGAGCACCATCATGGAGAACATACGGAAAGCATTTAGAAAATCG
AAATGggtcaaaattaaaaactacAAGTCCTTACTATTTCCAGATCCAAG
GACAGATGGCTGTGACAAATCgatattttggttatttttttattttcaac
attgcAAACAGAAGTTTTCATCTAGAAAAAATCGACTTTAGTCCATCGTT
TTGGAAGGAAGTATTGTCAAACCTCAAGCTATTCTGGAACTCTTTTGTTT
TTCCAAGACTCCTCATCACAACCATACCAAAATCTGAGCCAATAGTAACA
GATAGTGAGAACTCAAATGTTAACAATAGTGATATGGACATCAAGATGAT
TTTAGCTCAGGAATCTTTAAACATCACCTTTGATAAATAAATGAGTGACA
GCCATTTGACTCTAGAGAAAATTTCAATCGAAGAATTTCGTTTGTATTCT
CTAACTGCTTTGAAAAGTTTCCTTTCAAttcgaaaaaaatcaacaactgG
TTCTATTGACACACTTATTGCAAGAGCTTTTGCTGCAGCCGAAGAGAATA
TACCAATCGACCCAGAATTGGAGCATCAGGAAAGAGCTAATACTGAAGAA
TATACAAAGAAATTTACAACTTTGTCTGTAGATGATCCATTTTCTATTCC
ACATAACGAATGGCTTGACGAAAAAGATGCAATCCATAAGTGGCCAAAAA
CATACTTTATGGACATTTCTAGATATTTTTCGCAAGTTCTCGGGAATGAC
AATTTATGGCAACGTTTGGAATGCGAGTACAAAGAAGGAAAGGCATATCG
CTATTACAGTGATGGATTTCTCGGAGAACTtcaaatcacatttccaaagc
AGAATCCTAATGTTTGTGTGATGAGATGTAAATGTTTACCATCCCAACGA
GTTTCGATGAAACAATATGATGTGTGGGCCATAATACAGCAGAAGGACAC
AGACAACGAGATTGATGGACAAATTTTAAGAGGATATTGTACCTGTACAG
CAGGCCTGTTAGgaAGCTGTAATCATGTTGCTGGATTATTGTTTCGTCTT
GAAATTGCAAACCTCTTGGGGGAAACCAGAAAAACATGTACTTCAGTTCG
CAGTAAATATATGGAACCTTCTTcgtcaaagaaaaaaacaatcaaaccaG
GAAAACTCTCTTCTTTTGTATTCAGACAAGACAATTATAGTAAACTTGCa
atctcaaaaacaaaagaggATAGTaagaaaatcttgaaaagaaaattaga
atATATGCCCATGAGCAGTAGTATCACTAACACACAACTTGTTTCCAACc
cgaaaaaaatgagaaaaatgttttttgactcATTCAAAGATGTAGACCCT
GACAGCTGTTTTATTCAGATGATGGAAGGAAAACCCATTATTGTCAACAA
AGAAGAAACTCAAAATTCGGAAATCCTATCTCTAAAGGAACATGCCAAAA
TATTCAAAGATAACAATTGTTATGACCATGAGAAATATCTCCAAGCTATT
TCGTTGACTGATgaccaaataacaaaaatttatgaaaaaactgTGTCACA
AAGTAATTCAAAGTTCTGGTTCGAACaaagaaaaggaagaataaCAGCgt
ccaattttaagaaaatctaTACAAGAATGGAGTCTTTGAAAACATCTGAT
GAAGATCCGATCCCACTACTCAAAGATGTAATGGGGGAAAGCAGCAGACG
TGCTACATGGTCAATGAAGCATGGCATATCTTCAGAACGGCATGCCATAA
TGAGACTCAAACAAGTCATACGTCTCAAACACCGTGGCATTAAATTCACA
AACCCTGGAATGACTGTTTCAAAGGAATACCCATACATCAGTGCCACACC
AGACTTGGAGTTCGAATGTCCATGTTGTGGAAAAGGAGTTTGTGAGGTAA
AATGTCCAACAAGTGTTCCTTTAACTAGAGCACCATCATGGAGAACATAC
GGAAAGCATTTAGAAAATCGAAATGggtcaaaattaaaaactacAAGTCC
TTACTATTTCCAGATCCAAGGACAGATGGCTGTGACAAATCgatattttg
gttatttttttattttcaacattgcAAACAGAAGTTTTCATCTAGAAAAA
ATCGACTTTAGTCCATCGTTTTGGAAGGAAGTATTGTCAAACCTCAAGCT
ATTCTGGAACTCTTTTGTTTTTCCAAGACTCCTCATCACAACCATACCAA
AATCTGAGCCAATAGTAACAGATAGTGAGAACTCAAATGTTAACAATAGT
GATATGGACATCAAGATGATTTTAGCTCAGGAATCTTTAAACATCACCTT
TGATAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026961XLOC_026961Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043248-proteinTCONS_00043248-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043248-exon-sc0004063-1491911889:8864..8997TCONS_00043248-exon-sc0004063-1491911889:8864..8997Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1510915933:8864..8997TCONS_00043248-exon-sc0004063-1510915933:8864..8997Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1575043694:8864..8997TCONS_00043248-exon-sc0004063-1575043694:8864..8997Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1491911889:9338..9825TCONS_00043248-exon-sc0004063-1491911889:9338..9825Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1510915933:9338..9825TCONS_00043248-exon-sc0004063-1510915933:9338..9825Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1575043694:9338..9825TCONS_00043248-exon-sc0004063-1575043694:9338..9825Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1491911889:10263..11592TCONS_00043248-exon-sc0004063-1491911889:10263..11592Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1510915933:10263..11592TCONS_00043248-exon-sc0004063-1510915933:10263..11592Clytia hemisphaericaexon
TCONS_00043248-exon-sc0004063-1575043694:10263..11592TCONS_00043248-exon-sc0004063-1575043694:10263..11592Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004063supercontigsc0004063:8864..11592 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0814177 0.0992438 0.0230463 0.0450944 0.274491 0.216906 0.44487 0.342985 0.274436 0.509901 0.371191 0.257563 0.148908 0.267109 0.450758 0.297682 0.29032 0.485506 0.367832 0.543402 0.295197 0.316771 0.466759 0.44557 0 0 1.25595 1.13188 0.858489 0.55242
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011604Exonuc_phg/RecB_C
IPR019080YqaJ_viral_recombinase
IPR007527Znf_SWIM
IPR011335Restrct_endonuc-II-like
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043248 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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