|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043073 ID=TCONS_00043073|Name=TCONS_00043073|organism=Clytia hemisphaerica|type=transcript|length=485bp
tttcaaattgaagaaaaagtttgaatCAAATATTTGTAATCTGATTAATC
TTTTTTTCACTCTAGTGATCAAGTGATTTATTTTCATGGATAATCAGCAT
TCAAAAGATGTCCAAATTGAAGAAATGCTGTTAACTGGATGCTGGACATA
TGCTGCCATACGTTGAAGTTCTTGAacgaaatttgaaatgataGCAACGT
GATAATACTTTGAAAAGACTGCCATCGGAGAAAGAGTAGCGTGCTATTTC
GATTGATCGACGGAGAACAAATTATGGTAAACGATCTCTATTTATTCAAG
TTCCTTGATCCAACTTGTAATGGTTATAgattacatgatttttttttagg
gtatacaaaaatccgaaaacaggctcagagatgcttaggtagAAAGCttg
ataaggctgaaaaatgcttgaggggatgcttaaatctaaagcataaattt
aggaaatgctgaaaatccgtgaaattccagccaaa Run BLAST on NCBI transcript from alignment at sc0003902:4418..5599+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043073 ID=TCONS_00043073|Name=TCONS_00043073|organism=Clytia hemisphaerica|type=transcript|length=1182bp|location=Sequence derived from alignment at sc0003902:4418..5599+ (Clytia hemisphaerica)
tttcaaattgaagaaaaagtttgaatCAAATATTTGTAATCTGATTAATC
TTTTTTTCACTCTAGTGATCAAGTGATTTATTTTCATGGATAATCAGCAT
TCAAAAGATGTCCAAATTGAAGAAATGGTAAAATTATTGTTTCTTGGGTT
TAATGGAATATTACATTCTGCTGGGGNNNNCAAAAGGGGGTggcaaatgt
ttcatttcaggGAGATTCTGAAAAGGAGAAAGAAGGAGAGCATGGGAAAA
AAGTTCTGACAAAGCTCATACTATTTGCAGCAAATTTATTACTTAGCAGT
TGAAAAATCGTGCATTATTGGTTAACTTACAAAGGGCTGAATCACTTTCT
AAAATTTATGcatattttttggcaaaatttaagaataatggGCTAAACGT
CTCAAAGGGAGGGGCAAAAGATGTTTCCATTTTCTTGTTTGGAAGGTAAT
TTTTTTGGTTTACAGACATTGGAAAGGAACCTTTAGACCGgatgatggaa
aaaaaattaaaattaaattgttttttttttttttcacacttGAATTAATG
gttgagaaaataaaagaaatgtgttTTGAGATACCAGAAAACAACGAAAG
TTTTGTAGTGGTTAACTTGTGTTAAGGGTGCCATTAAGGAAAGCAATATT
GGAGAGCTTTTGTTATATCCTTTCTATCGCATCATACCATATCATCCGAT
ACGATCAGTTCCATTGATATCCTGTGTGGCCTTCTTGGTAGAAAATTAAA
ACCATCCATCATGACGCCTGCTTTTAACCATGCAGATCATGGTTATGATT
GAAGCAATTCCCTTTCCATTTTAGCTGTTAACTGGATGCTGGACATATGC
TGCCATACGTTGAAGTTCTTGAacgaaatttgaaatgataGCAACGTGAT
AATACTTTGAAAAGACTGCCATCGGAGAAAGAGTAGCGTGCTATTTCGAT
TGATCGACGGAGAACAAATTATGGTAAACGATCTCTATTTATTCAAGTTC
CTTGATCCAACTTGTAATGGTTATAgattacatgatttttttttagggta
tacaaaaatccgaaaacaggctcagagatgcttaggtagAAAGCttgata
aggctgaaaaatgcttgaggggatgcttaaatctaaagcataaatttagg
aaatgctgaaaatccgtgaaattccagccaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043073-exon-sc0003902-1491911889:4418..4544 | TCONS_00043073-exon-sc0003902-1491911889:4418..4544 | Clytia hemisphaerica | exon |
| TCONS_00043073-exon-sc0003902-1510915933:4418..4544 | TCONS_00043073-exon-sc0003902-1510915933:4418..4544 | Clytia hemisphaerica | exon |
| TCONS_00043073-exon-sc0003902-1575043694:4418..4544 | TCONS_00043073-exon-sc0003902-1575043694:4418..4544 | Clytia hemisphaerica | exon |
| TCONS_00043073-exon-sc0003902-1491911889:5242..5599 | TCONS_00043073-exon-sc0003902-1491911889:5242..5599 | Clytia hemisphaerica | exon |
| TCONS_00043073-exon-sc0003902-1510915933:5242..5599 | TCONS_00043073-exon-sc0003902-1510915933:5242..5599 | Clytia hemisphaerica | exon |
| TCONS_00043073-exon-sc0003902-1575043694:5242..5599 | TCONS_00043073-exon-sc0003902-1575043694:5242..5599 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003902 | supercontig | sc0003902:4418..5599 + |
Blast
The following BLAST results are available for this feature:
|
