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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024417 ID=TCONS_00024417|Name=TCONS_00024417|organism=Clytia hemisphaerica|type=transcript|length=676bp
GGAAGTTAGAAAGATTATAATGAAAAAATGGACAGAAATGATTCTACTGG
AAAGACATCTTCCTTATCCACAACAACCATACCCATCAGTAGAGCTACAA
CAAAATCAGGACGCAAAATATCAAATACTAGGTCCTTGGCAATAACTGTT
GGTGATACGCTGAAAGAAAAACAGGAAATCACTTTAAGCGTGTTAGATTG
TCAATCACGAGGCCTTCTCGATGCTGTCCATCAAACATTAACGGATGTCT
TCATACCCGCTGTGTCTTCATCCAATGTTTTCCAAAATGCGGACAAGAAG
AATGGCGGACAGAGCCGCGCCCGGTTCATTAATTCCTTATCGACTTTCAT
AGACGCTTTGACAGGTGCTCAACAGAGTTTAAGTGACGTGGTCAAACTCT
CGAAATGtgatgctttagatttaagtaAATTGACAACGCCCGCTTTGTAT
CAGAGCGCGGCCGCTTCGAGTGACACTTTGGAGGTGATTGAAACACAGAC
TAAAGCATGGATCAAAGAAATTGAACAGATTTTAGCAGAGACAGAGCAGA
TGAGGCGGGAGGCGGATAACGTCGGACCCAAGGCTGAATTGGACCACTGG
AAGAAACGCATGTCTAAGTTCAATTCTCTTCTCGATGAGCTGAAATCACA
AAAATGTAAAGCTGTACTTGGCGTTT Run BLAST on NCBI transcript from alignment at sc0000491:148281..164119- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024417 ID=TCONS_00024417|Name=TCONS_00024417|organism=Clytia hemisphaerica|type=transcript|length=15839bp|location=Sequence derived from alignment at sc0000491:148281..164119- (Clytia hemisphaerica)
GGAAGTTAGAAAGATTATAATGAAAAAATGGACAGAAATGATTCTACTGG
AAAGACATCTTCCTTATCCACAACAACCATACCCATCAGTAGAGCTACAA
CAAAATCAGGACGCAAAATATCAAATACTAGGTCCTTGGCAATAACTGTT
GGTGATACGCTGAAAGAAAAACAGGTGATTTATTTCGTTTGTACTTTGAA
ATATCTTCCCAACTATATCCAAAAGGTTGTTTACTTAACTGTGTTTTAAA
TGGGTTTTCTTGCAAAGTTTAATGTTTTTAAAATACCTGGTCTGGATCAA
AGAAGGGTTTCTCAAATTGAAGATATATTTAAGCTCAAAATATAATCTAC
CATAAAAGTTATTGAACTGCATGCATGATAGGCTAGTATTTTACCTTTAA
CATGACAGATCGGATAAATTTCCAGGATGGTTTTATCTATGAAACCATCA
ATGCATTCTCTTGATTATTTTTGAGTTATTTGAAATTTTTACTTCTACTT
GATAATTGTAGAAATAAATCGGGTCTCTTTTTCTTGTACTATTCTGTTCT
GTTTTGATTTTTGATTTTTAAACTGTGAAATCTTTATGCTGGAAACTTAT
TTTATAAACTCCACTATGGTAGTATCTTTTTAATTTACTGTAATAGAAAG
ATCGAGGAAAAAGCAAAAATCCAATTATATTTAAATCACAGCACAGCATA
ATAAGCCTCTTTAAAGAGTATTCTTGATTTTGGTTTGTTTTTTACTGAAA
TGTTTTTACTGAAATCTTAACCATGCTGTGGGGGAAGCTAGTTTGTGTGT
GGTTTGATTTAAATCATGAGAGATTACTTATATATTCCTTTTCTCTGTTT
TGATAGATCCTCTCTCCTCTCTTTGAAAGTCAAGAGGCAGGTGGTTTCTC
ATTAGTGTTTACACGTTTTTTTATAAGAACATGCTAAATATTTGAAGTAT
TCAGATGTTCTTAACTTGAGTTTTTAAAGCCTAAAAATGTTCTTAAAATG
TTCTTAATTTCATTATTTTGTGAGTATTTTTGTGCAATTTCATAAGACAT
TGGGTGCTTTAGAAACCATAAATTGTTAAAATGCTCTCAATATTTTGCCC
ATCGNATTTCATTATTTCGTGAGTATTTTTGTGCAATTTCATAAGACATT
GGGTGCTTTAGAAACCATAAATTGTTAAAATGCTCTCAATATTTTGCCCA
TCGAAGCCTTATGTTCTTATATTGTTTGTTCTTATAAAGAAAACGTGTAT
AGCAATTTGATAACTGTGATATATCGATGATAGAATATCTCTATAAAATA
AAAAAGGCTTAAATTATATTATCTTAAGCAATGTAGTAAAGTAGTGAAAA
TTGAGATAGCAATTGAAAAAAAAGTTTTCTTTTTCTATAACTTTAGGGCA
CTGAGACTATGAAATAAATATTTTTGAAAGTGAGAATTTGTTTGGAAATT
TTTAAGAAATAGGTTCCTATAGTTTCGGCATACAAATTCACAAGGTGATA
AGACCTTGGAACTTTTATGATTGTAATATTTTTGGATTTTATTTTGACTA
CCATTGCTTTACGTATACAAATGATAGAATTTTTATTCATCTGGTAAAAC
GATATTTTCATTAATACAAACACAATGAAACGAGGTTTAACCTGGCGTGC
TTCAATCAAAAGACTTCAAGCTAAGGCTGAAAAGGTAAGGGTTGATTTCA
CACCTATTTGTTAAAATTAGTTTTCTGAGACTTGAGATCTAAATTACCTG
CAAGATCAAAAATTTGCGGAATATCAATGTATTCAATCCATTTTTTTGTT
CACTGAGGAATTTGGTGAATTGAGAATAATATATAATTGGTTGGTTAAAA
AAAGAGAACAATGTACCTTACATTTTACAAGTACGAAATATAAACGAATG
GTCGAATAGTCTGTGTTTTGTTCAAATATTCATTGTAATTTTTTGTGCAT
TTTTTGGTTCGCCGATAAAAATCAGATGACAGCTTTTTATCTTACCCTGG
ATTAGACTGGACTAGGAATTGTCAGATAAATACATAACATGCTCTGTAAT
ATTGTTAAGATGTCACAAACCTGGTGTTTGAATTGAGAATTCTTCAGGAT
AACCGATTGTGAAAGCTCTTTTCAAATGGAGCTTAGCCTTTCAGCTACCT
TCAGACGAAGTGCTTTAAAAGTAAGATACAACAACAATCTCTCTCTGTAA
TTCGAGTCTCTGTACATGGGCCCCGTCAACGGGGGGGGGGGGGGGGGGGG
GCGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTTTTTGGTAGACCATGTCATACGTTTTTAAGAGTTACTTTTTTAAGCTG
GTTTTAGACCAAATCAAACCACAAAAACTATTATTCTCCCCAATTAGATA
TCGTTTTAAGGTGTTTTGAGTGTGTAAAAAGTGAAAAATTTCTATCGTCG
CCCGACCATGGTAGGCGACATTTTTTTCAAATGTTGGCCTCCTCACTCAA
AATGGCTCGCCGGGGCCCATGCTGTAAAGTCGAATCTTTTTGTAATTCGA
ATGCAAAATTGGTCACTTCATCAGCTGGAAAATCATTTAAAATACTCCAT
GTAATACGAATTTGCCTATAACTCGAAAAAAATCCTCGATTACTTGAAGA
TCACATTAGAAAGAGTCAACTGTATAATTATAAAGCTTTTTCTTGCAAAT
GGTGTTTTTACAAGGTCTTATTTGATTTGGTTGGTCGTTAGCCAGTAATA
AAACAATTTTCTTACTTTTTCTAAAGAAAGCGTCTTTATTATTACTTCAA
ATGACCAATTATTAAGGTATCTTATAAAAACTCCAGCTCATCTGATGGTG
TTTTGCAGAAAAATCAATTTTTTGAATTATTTCTGAATGTTTGATTCGTA
TAAAAGTAAAAGTACAGCCACTAACTGAAACGTACAGCTTTAAGTCCAGA
TTACCTAAGGTAGGGGTGGGCGCTACTCTTTCTCCCTGGATTGTTCCACT
TACCCTTGTGTTGCCTTGATCCTTATTATGATATTAACTTACATAATACA
TTAGTAGAAAAACTTTTTTAGTCTTCTCTAAACGTAATTTATTATTCGAT
AAATCATCGACAAAAAAGAAAACTAACTTACAGTATTATTACCACAAAGT
GCGTCATGCGGACTCAATCTTCAGGTAATATTAATGTATCATTGGTTTTG
CTTTCGACTAGTTGTTGAGAATATAAGATTTATTATTATAAAAACAGTTT
ATTTCCGTTCAACAGCTTCAGGTCTCTTGATGATAGATTTGGTCTCATCC
ACTGACCTTTATGTATCCTTGGACCAAGTTACTCAATGTCGGCCAAGCAA
AATATTATGATCGGAGTTTCTTTGAAATTGGTACCCGCGTAGAGAGCGCT
AGATCTAGTTTCGCTTGTACACTAATGATGTAGCGCCGTTTGTCGTTAGG
CAAAGCTTCAAACACTACCATGGCTTCTTTGTGGGTACCAACTTTCAAAA
AAACTTCGATCAAAGATGGCGAATATAGCTTGGTCCAGGATTATATAAAG
GTCAGTGGTCTCATCATACGTTTTGGCTGTACTGAACCTCTAAAGACGGT
ATCTGCAATAAAAGTTAAGAAAAAAATATAACATAACTAGTTATTTATTT
TTTCTCAATGGTAGAAAATTAGTACTCAAGCTCAAATGAAAATAACAGAC
CTAATTAAAACTGCTAGAACAGAATAACATGAGAGAGGGGGGAACTTTAA
TTCTTTGCGATTGACGAATTTTGTTAGTTTATTGGACGCTTTGCGTCTCT
GTTTATATGTTGTTTTGCTCTATAACTTTGGCAAGGACGCCATCAAGATT
TACTTCGTTTCTACCAGTCTTTTGAAATTTGTCTTTCGAAATGCCACATT
CAAGGGGCTGGAAGATTTTAAACCAGAAACTTCATGAAGTATGTAGAATG
TTTGGTTTTCTGGTTCCTATTCATGATTATGCACCACTGGAGAGTCTTCT
GAGAACTTTTAAAATTTTCCACCCAATACGTCACTTAAACAATAGAAAAA
GTGACGTATTCATGATATGCACAACTGGAAAGTCTTCTGAAATTTTTTAA
AATTTTCCACCTAATACGTCACTTAAACAATAGAAAATAGTGACGTATTG
GGTGGAACAAAAACAGAAAAGTTACATAATTTCGTGAAGTCATTGCAGTG
GTACATATCATGAATAATATCATTCGAAAGTACAAGACAGGAAGTGGAAG
ACAGTCACTGGTCTCTAGTATTCACCAAGTCAGGACAGTGTCGTTAGGAT
TTAACTTTGCTCTTTTTTCCATATGAAGAACAGAGTGTGAATGTTGAAAC
TTTTCTGTTTAGTTGAGATACAAACACACAATCTTCTCGACTTGCTAGTA
AGAAGAGTATCTTATCAAATCCAAAAGATCTACAAAACCAAAGATTGATT
ATGATTTCCCTACAGATTTATAAAACATAGTTGCAACATTGAATGAAAAT
GTATCCTTTCGGAAATTCATACAATCAACTCTCTGTAATTCGAATCTTTC
TGTAATTCGAATCTTTCTGTAAAATTCGAATCTTTCTGTAATTCGAACTA
AAATATTGGTCCACTTAGCTGGAAAGTGGTTTAAAATACTTTCTTTAATT
CAAGTCTTTCTCTTATTCGAAGACGATTCTTTGTCCCTCGAAGATCGAAN
TCTTTAATCTTTAATTCAAGTCTTTCTCTTATTCGAACACGATTCTTGGT
CCCTCGAAGATCGAATTAGAGAGAGTCAACTGCATTAACATTTTAAACTT
CTTTCACAATGGGTTTAACTTCTACTACTACAGGCACGAGTGAAGGAGGA
GAAAGAGGCAAAGAAAGCACAATTAGACGCTCGCCATGAATATCTTCTTG
GAAACATTTCCGATGCACTCAATGTCGATTACAATGAAATTGTGGAACAT
ATCATTGAAGGAACACAGGTTTGTGACACCTTTGTATATACCTTATCGGG
GAAAACTTCGTCGGGGAAAATTTTCGTCAGGGAAAGTTTTTGTCGGGGAA
AAATATTCGTCACTTGCTGGTAGTTGGTAAACGCATTAAGACTGGGGAAA
GTTTTCGTCGGGGAAAAATATTCGTCATTTGGCCAAAATTTCGTCACTTT
TCCCCGACGAAGTTTTCCCCGATAAGGTATTTTTTCAATCCAGTGAAAGT
ATTATCTCTATTTCATGCAAGTCAAATTATACCACATCTCTCATAAACTC
TTTATTTATTATTTATTTTATGTCAGTTTTTTTCTTTGTAGCTTATCATT
ATCAGGTACTCTTTTTCGTCCGGATATTTCCGGATTCTTTTTCTTTCGAT
TACCGATTACCGAACCAGCGTCTCTTTAAAGCTACAGATCAAGGAAAAAA
AGACTGGGTGAGTTCATCCTTTGCACATTTTTGGCAACATAATAGACTAG
AGTCTACTTTTGGCTGAACTTTGCTTTTTGATAATTTTTTATGACGCTGA
GTCCAGTGAAGTTGACTAGGAGCATTTGGCGAGGTCGCCATTTTGAAAAA
AAAAATTTAAAATCCAAATAACAATAAAACTACTTAAAGTTGAAAGATAT
AACCAAAAATAGGAAACAAACACGATTAACAGATTTGCAATCCCTTATTT
TTAAATAAAAATATTGCTTCATACTGTTTTTACCTTCCAAAAACAACTAA
AATCTGGCGGACTGTTTTACAGTCCGCCTAAGCAAAAGCATTATTACCAT
ACACTACCGGGCCACTTAATCGCGCCATCCAGTCTATAAAAAAAGCTTTA
AGTGGACCCCGGGCTAGCAACATAATGAAGTTGAAAACCAATAATCTGGA
ACATCTGATGGCAGTCAACTTTCATTAATTCGAACTTGAGAGGGCTGTCC
CGTTATAGAGTATTATTTCGAATTATCAAAAGATTTGAATAATGGAAAGT
CGAATCACCGAGAGTCTACTGTAAACAATATGTTCTATAATAATTTCTTT
GTTTGTGTTTTCAGATCGAAACAATCACCAGTTTCTTTCGAGAAAACGGA
CCAAGATCCAGTCTGATTTTTTTCTATCAACAAATGGAAGCTACTAATGA
TGGAGGTTAGTAGATTGGGCTTTTCTAGAAAAAAAACTTTACCCCCACTG
TTGAGGATACTGATTTTTCGAAGTATCGAACCCCCTGGTTATCCTACTTT
ATTAGTAAAGACCCCCTGGGTATCCACTTTTAAAAATATGCTCAACACCC
TGGATATCCCCTCTTATAAAGATGCTTACCCCTGGATATCGTATTTTTTA
CATGAAAAGACACTTTACCTTCAGGATATCCGCTCCCTTGTAGATATTTA
ACCCCCCGGATATCCACTTTTGAACAAAAATCGTTAACCCCCTGGATATC
CGATATCCTAACAGGGGGGCACGGACTATTTCCGGAAAAGCCCATTTATA
ACACTGATCCCTAACAACTTGACTGGATATGATAAAGGAAGTGTATTCAG
CTTTAGAGGTGAATTGTCCGCCATTTTGTTTTAATTCGGGTCGTTAACAT
TGCGTTTCGAATGTTTTGGAATTCAAACGTTCGAAAATCTGAGGTAAACA
TGAAATCGGCCGTTACAAGAATTTTGGATGTTCTTTTATAAACAAAAAAA
ATACGTCTACCTAGAAAAAAATCTATCATGGTGATTCGATTGTGGTTTTG
GTAGCTGAGGACCAAGATGTTCTAACCCCGGGAGGCACTTGGGCAAAAAA
GGGTACGGGGATGTGCCGAGGGTCGAGGTACTTTTCTCACATCTATGAGT
CCCAGGTAGGATCGCAAAAACGCAAAAGTAGAAAAGGAAGTCCCTCGTAG
GTTACCTTTTTGGGGGAATTTGGAAAAAAATTTAAGTCTCATTCAGGGTC
ATTTTTTCCTACGTCCCACGTAGAGTTCATTTTTTCGGACCTCTGTGGCA
CACCACGTCGGTTGGAAAGGGTTGTACTCCCTGGGATTCTAACACCCGTA
ATGATTTCTTAAATAAAAAAAGTATTTTTTTTAAATATTTCTTGTGGTGA
GTTTCTTTTGTTTTTTTCATAGTGGATCACATGCGTCTTGGACACGGTGG
CAATCAACTGGTCAACAAAACCAAACATAAATTATTTCTGACTGACGGAT
TGGCAGAAAAATTGACTGGATTTTGTTTGTATTTCGCGAAGATCAACAAA
ACAAAAGAAATCACTGCACAAAATATACATAATGTAAGTAAGTTGGATCA
GTTTGGATTAATAATCTCAATACTATTATACTGTTCAGGGTTTCGGTAAC
GTGGGAAGATCTATCCCACGACACAGAAATCCTAAAAGCAAACGGGTAAT
CTATATCAATCTAATTACCAGTGGTAGGTTTGTTTAAAAAAAGAAGAAAA
AAATTCCAGAGTGGACAGTTGTGGAAAGGAAATTGAAGTCAGTGCTGCTT
GAGGAAGAGCTGAGAAAGTGTTCTTGGAGCAGATTTGGCTGCTTGAAAAT
GAATAGAGAGGAATTGCTTGAGCATAGAAGGTGAACAATGTTTTAAAGAA
AAGAAGATGAGATTGTGATGGGCACAAGGTGTCATGGAAATGTCAGACGT
GTATGCTAAATAAATCATAACATGGGGCTGTGGGCCATAGAACAAACTTT
GAAAAGATGAAGATCCTATCTTTGTGTTGGAGTGGAGACAAAGTCATGTG
GCTGTCTAGGCTTTTTGAATGGCCGTAATGGAATAGAGTTGTAGACAGTT
GTCTAGGCGAGAAGAAGAGGAAGCATNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTATACCTGTAGACGTGGAACATGACATGACATATCAGTGGAGGGATTCA
AAGACTGTTATGTGCCTGAGTGAAGCCTCCAGAGGAGAGTGAGAAGATTG
AGAAAAAAAAAGAGATGTTGAAAGAAGTAGGTATTTTGAAAGCAGTGGGG
AAAATGAGATGGTGGGTAAAAGAACATAGAAATATTCTTACATTGAGGTG
AAGTTTGCGTGATCTTGACAGTAGTCTTGAGCGAAAAAAAGAAATTCTTT
TTCTTTTTTTTGAAATTTGGCGCTGTTGTAAACAACTTGACGTAACCATG
GAGACTACATTTCGATTGGTTTCTATTCAGAGATTCTAACCAATCGGATG
AGAGGGGCGTGTGTGGCGGAAATGTGATGGGCGGGTCAAACGGGTGTGAC
GGAGGTAGATACTAGCCAAGTTGGAAATAGTACCAGTTTGACAGAGGCGA
ATTAGAAAGTGGAGTGGAAAGAGAGGTCTTGAGGTAAAAGGAGTGTTGAG
AGATAGGGGAAGAAGGAGGGAGATAGAGTTTTTTTTTAATTTAAAATTTT
GAGATAGAAAAATAGCATCCTCTGGGGGTCGAACCCGGGTCATTGCGGCC
CGAGATGGGAGTGCTAGCAAAAGGCCATTGAAGCTGAACTGAACTAAAGT
TGAAAAGATTGGATTCTGTTTGTATTTCGCTAAGATCAACAAAACAAAAG
AAATCACTGCACAAAATATACATAATGTAAGTAAGTTGGATCAGGTTGGA
TCCACATAATTTCAAGTAGTTCTAGCAATTCAAGTCGATCAAGCAATATC
AAGAAAACTTTTTCAAAAATCTCACCTTTAGATAAGAATTGATAGTCCTT
TGGTTTGATGAACTCTGCATGAAAAGGGCAACGGAATTTCGAGTATTCCA
GAAATTTCTTGCTTTGAGACCCCGCAAAGAGAGAATAACCTAAGGCTGAA
GTTGTTGGATATATATTATCGTCCACCTCTAGGCAAAACGCACTGTCGAA
TATTCTTAGATATCCGATAGCAAAATATCTGCTCTGTAGCAGCGAGCATA
AAGAAAATAGTTTATTGATCAAATAATTATTTAAATGCCACATATATAAA
AACAGATAAACAGAAAGGTCTTTTTAACAAAAGAGAAAGGAAATTTGAAG
ATTTTGTAATTAAAAGAGTTACAGAGAAAAAAACAATCAATGAAATTGAT
AACATTCTTATAAGATAGTAAAACGTTCGAAAATATCATGAAAAGAGAGA
AAGACCGAATGAAATCGAACATTTAAATGCTTTTCTTCTAATTTGTGAAC
GATAAACCATATACTCAACGTGAAAAATCGGATATCGAAATTATTCAGTC
TCGCTTTAATGATATTCGATATTTTATTATTGCGCCCGTCAAGGGCGCCT
TAATGAGGAGTACCTAGGGAAAATCTCACGATTCAGTTTTCCGGCTCGAT
TATTCATGTTTGTTCTCGATCATTCATTTTTTANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTGTTACTGGAATT
TGATTAAGTAAGACCAAAGTATTTTTCAACAAATTATGGACAAAAATCCA
GATGGTGCGATTATTGATTATGATTGATAAATAATCTATTATGATTAAAT
ATCGATTGCAGTCGATCAGTATCAATTTAAGTACATTACATCGATTACCT
ATTGATTTTTACTGACTTAGTAACTAATTGATACATTAACGCAATCGATA
GATAATTAATATATACTCACAATTGTTTCAATAAACTATGTATCAATGCA
ATCAATATTTTATAGATTACTCATTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTATGTTTTACTGAACTAAATTTCTTCTAGATGACTTTGAGTGAATT
ATGTTTAAAAAAAAATATTGATTTTTGTTGTTCTGTTGTTGTATATTGAT
TTTACTGTAGGTGTTCTACACTTGGAAGCTGCTAAATTTATTTTTTCCTG
TACAAGGACCATAAAGGAGTGGCAAAGAAAACTTCTTGTGTGATTTTTAA
GAAAACTATNNATGATACAGTAGGATATCCAGGGGGTTCGACACTTCGAA
AAATCAATATCCTCAACAGTGGGGTTGAAGTTTTTTCTGGAAAAGTCCAA
TAAGGGTTTATATGAAAATTTAGACGAAATTAGATGAGAGATGTCGACAG
ACTAGACTAGAGGAAACTTCTGACTGAACTTAGCTTTCTGATGATTTTGA
TGGCGCCGAGTCCAGTGAAGTAGACTAGAGGATTTCGCCATCTTGAATTC
TTTTCACTTTCGTTTTCAAAAATTATACGAAAACGTCAAAACAATAAAAT
GTTTCTGAAATTCCACCAAAGTTTACGAAACTATAGTAAAGACAAGAAAA
TACATCCAAAATTTGAAAAAAATTGGTCTATTGGCCATGGCTTTCTGTTT
GTTTTTCTTCAAAAGAGACTGGATCTAGTGGTACGGATTTGCTACCACCT
CGAGCAAATCCAAAAAATGGAGCCTACCAAATTACACCGGGCCACTTATG
AGCGTCACATTCAGTCTATCAAAAAGTTTTAAGTGGACCCCAGGCTAACA
TTAGACCAACATACGGTACCTAGAAGTGAAGTTGAAATTCAAAAGAGAAC
ATAACTTTTCCCAATCATTGAATTATTTTCATTCTTAAAATGCAGAATGG
TTTTGGAAATTACGATTATTTTGAAAACTAGGATACAATTCGATTATGAA
GTATTAAAATCAACTTTATATATAATCTTGATATATGACCAGTTACTTCA
CATTTTCAGATATTCCGTAGAGCCCTGTTAGAAAAATGGTATAAAAACGT
TTTTGTGACATAAAGTTTATCTTCACCTAATACGTAATACGTGCGCAGAG
GCGATGAAATGGTGAAAATTCCCTTATCTGATCTCTGGAGCATCCTAGAG
CAATCAATGATCCCTCCATTTCGCTGTAGAATTCGCTGTATTTTGTTGTG
TTCAGTCCTCGACGGGGCAAATGTTGAATTTCATTTCTCAAAATCTTTAG
TGTGAGACAATGAGCGATTTTTGTTTCTTCTGTTTCATCAGGCATTTCGC
TCCAACCGTTCCTTGGTGCTTTATAACCGCAAAGCGTTCGGATAAGTAAG
AAAACCAGAGTGATATCAAACATTGCTGAATTTGTTTTTCGGTCTGAAGG
ATAAATCAACTCGTATTGATCAGTCTTCAAAACCTTTTTTTTCTTCAATT
CATTCAGCTTTCGAATTTCATTCGGTTGACTCAATGCGTTGTATAGGTCC
TCGGGTTTGCGTGGATAATGCTCATGGAAGACATTCAATAAACATGTTTG
CGAAAATTCAGTCAACTTGTCCAATTTGCGACGGTTCTCTTCAAAATACT
CCATTTTCTGACAATTTGTTTTTCGATGTTTTGATTACAATCTACTTATG
AGCTCTTCACAACGTAAACTAAACTCCTTTATAAGATGTTTTTTAGATAA
CACGAGAAAATGTACTTTTATTATAGGAAATGTTTTTGATAAAATCGACC
TTTAAGAATATTTTCATTTTTATTGACATTCCTTTCTTTCTCTCAATCCA
ATTTCCCCTTTCCGATGAGCATTAAATAGTCTCATAATGATTCAAGAATA
TTTTAGACTGATCAAGAAAAATTAGATCCTGGAAGTCAATACGCTTTAAG
TAAACACTGTTATCTGCTACGTACCTTGTTGATACCACTCTCGAGAAAAT
AAGTCTAAGAACTTTTACATGGTTTTTCCACATCATAGTAAAGCTTGAGT
TTTCTTAATTTTTAATGATGAGATTGAAAAGATTATCCTTATTAAAAAAC
TGTCAATGGTGCAAAGAGATCAAAATTCTTGGCATGCAATCAATAGTTTC
TTAATCACCCACATAATTGGAATGATAATAATTATATAGTGCAAAAGATG
ATCGTCTATTTTTGTCTGTCGTTCAACCTATTCTCAAAAATTTGTCCGAC
TAATAATCGAGCCTCCAAAAAATTAAAATTAATCAGTTATAATGATGCCT
TAAACATCTTTTTGATAATTGTTATTTTTATAGTAAGACGAGTCAACCCT
CAGGAGTAAAGGGTTAAAGCACTGACGGTTTCGGTTTTCTTTTTAGGCCA
TCCATTTTGATTAGAATTAATCCTTTTCTGAAATCTCTTGATCTTTCGTC
TCATTTCAGGAAATCACTTTAAGCGTGTTAGATTGTCAATCACGAGGCCT
TCTCGATGCTGTCCATCAAACATTAACGGATGTCTTCATACCCGCTGTGT
CTTCATCCAATGTTTTCCAAAATGCGGACAAGAAGAATGGCGGACAGAGC
CGCGCCCGGTTCATTAATTCCTTATCGACTTTCATAGACGCTTTGACAGG
TACAATCATTGATTTAGAAGCCCTGAAGGCGCTGGAAACTCTTGGATGAT
TAAAGATAAGAGTGAAATGAAGAGGGATGCTGCAGATAAGATGGAGTTTT
TATAAGATACTTTAATAATTGGTCATTTGAAGTAATAAAAATGACGCGTT
TTTTATTCTTTATTACTGGTTGACGACCAACCAAATCAAATAAGAGCTTG
TAAAAACTACATCTCGTCTCGGATGCTGACAGTTTATGCACAACGACCTA
TCCTCGTCTTTAGTTTCACCTTATTCTTTTTCAAACGCCAACACATGTCT
GTCAGAAGTCGTCACTACGATGCTTTATACGGCCTCCTTGCTCGTAAAGA
AACTAACACACGACTGCGTTACTTCAACAGCAACGTGGTACTCGTTCACC
TCACCCACGCACTTTGTATTATATGAAAATATGAGATATAGAGAAAGAGG
GGTGCCCTCCCCTACCTTCGGGTAGATTGCTATAGAAAGAGGAGCCTTCG
GGTCGTTTTCAACTACGGTACCAGACTTATTTACTTACTTTGTGTTTTAG
GGACTACTGATGGTGACAGAAGCTATGAAGCCTTTCGGTCATCCATTTGA
CATTTTTTCAATGTCTATTTTCTGAGTATTTAAGGTATTAGCATGGACGG
GCAGTGTGGTGTGACCACGTTCTTTCAGATACACGAGCTTCAAAGTAAAA
TCTGCTAAATCCATTTTGACTGTGTGCTTTCTGATTTGTCAACAGGTGCT
CAACAGAGTTTAAGTGACGTGGTCAAACTCTCGAAATGTGATGCTTTAGA
TTTAAGTAAATTGACAACGCCCGCTTTGTATCAGAGCGCGGCCGCTTCGA
GTGACACTTTGGAGGTGATTGAAACACAGACTAAAGCATGGATCAAAGAA
ATTGAACAGGTATCAAACTACTATTTGTCAGTATAAATAAATTTTCATAA
ACTAATCGAAAGATAGCAGGAAAGTTTATCTTAGGTTTACACTCGCTCGT
TTAAGATTGTTTTGAAAAAAGATATTATCGCTGTCGTCCTGTCCGGAAAA
ACCTTAAATGACTGCATTGGAATTCGTAATTTAAACTCTTTACAAAAATG
GGCTTTTCCAGAAAAAAAATTTACCCCCACTGTCGTGGATGTTGATTTTC
CGAAGTCTCGAACCCCCTGAATATCCTACTTTATTAATAAAGACCCCCTG
GATATCCACTCTTAAAAATATGCTCAACCCCCTGGATATCCTCTCTTATA
AAGATGCTTACCTCTGGATATCGTATTTTTTACTTGAAAAGACACTTTAC
CCCTATGGATATCCGCTCCCTCGTAGATATTTAACCCCCTGGATATCCGA
TACCCTGAACAGGGGGGCACGGACCATTTCTGGAAAAGCCCAATATTTTA
GCGTCTGTCGTATTCTGGAAATTACTTCTTTAATAGATGTACAGTCAACT
CTCTCTTTAATTCGAACCTCTAATATTCGAGTCTTTCTGTAATTCGAACT
AAAAGATTGGTTTAGATTTAAATTACTCTCTGTAATAAGAATCTTTCTCT
AATTCGAAGAAAGTTTTTGATCCCCTTGAAGATCGAATTAGAGAGTGACA
ACTCTTGAGATTAAATATGTTTTTCATTTTTTTCACGAAAGATTTTAGCA
GAGACAGAGCAGATGAGGCGGGAGGCGGATAACGTCGGACCCAAGGCTGA
ATTGGACCACTGGAAGAAACGCATGTCTAAGTTCAATTCTCTTCTCGATG
AGCTGAAATCACAAAAATGTAAAGCTGTACTTGGCGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024417-exon-sc0000491-1575043694:163946..164119 | TCONS_00024417-exon-sc0000491-1575043694:163946..164119 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1575043694:150071..150260 | TCONS_00024417-exon-sc0000491-1575043694:150071..150260 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1575043694:149161..149324 | TCONS_00024417-exon-sc0000491-1575043694:149161..149324 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1575043694:148281..148428 | TCONS_00024417-exon-sc0000491-1575043694:148281..148428 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1510915933:163946..164119 | TCONS_00024417-exon-sc0000491-1510915933:163946..164119 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1510915933:150071..150260 | TCONS_00024417-exon-sc0000491-1510915933:150071..150260 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1510915933:149161..149324 | TCONS_00024417-exon-sc0000491-1510915933:149161..149324 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1510915933:148281..148428 | TCONS_00024417-exon-sc0000491-1510915933:148281..148428 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1491911889:163946..164119 | TCONS_00024417-exon-sc0000491-1491911889:163946..164119 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1491911889:150071..150260 | TCONS_00024417-exon-sc0000491-1491911889:150071..150260 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1491911889:149161..149324 | TCONS_00024417-exon-sc0000491-1491911889:149161..149324 | Clytia hemisphaerica | exon |
| TCONS_00024417-exon-sc0000491-1491911889:148281..148428 | TCONS_00024417-exon-sc0000491-1491911889:148281..148428 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000491 | supercontig | sc0000491:148281..164119 - |
Blast
BLAST of TCONS_00024417 vs. Swiss-Prot (Human)
Match: DYH5 (Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 5.593e-40 Identity = 74/161 (45.96%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 172 QEITLSVLDCQSRGLLDAVHQTLTDVFIPAV--SSSNVFQNADKKNGGQSRARFINSLSTFIDALTGAQQSLSDVVKLSKCDALDLSKLTTPALYQSAAASSDTLEVIETQTKAWIKEIEQILAETEQMRREADNVGPKAELDHWKKRMSKFNSLLDELKS 648
QE++ ++LD GLL++V + L+D+FIPA+ +S + ++ R F++SL F++ L+GAQ+SL + V L KCD L+L L P Y + A + +TL IE K WIK+ EQ+LAE Q+ +EAD+VGP+AEL+HWKKR+SKFN LL++LKS
Sbjct: 146 QEVSFNMLDAADGGLLNSVRRLLSDIFIPALRATSHGWGELEGLQDAANIRQEFLSSLEGFVNVLSGAQESLKEKVNLRKCDILELKTLKEPTDYLTLANNPETLGKIEDCMKVWIKQTEQVLAENNQLLKEADDVGPRAELEHWKKRLSKFNYLLEQLKS 306
The following BLAST results are available for this feature:
|
