TCONS_00024403 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024403
Unique NameTCONS_00024403
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1827

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024403 ID=TCONS_00024403|Name=TCONS_00024403|organism=Clytia hemisphaerica|type=transcript|length=1827bp
CAATAATGATCATATAGCAATTTTAGATATTCTCTCTCTAAAACATGCTG
ATGTATTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTAT
AATTTCTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAA
AGAAGAAACGAAAACTAATATACGCTAAGGGTAAAACATTTGTAGATTGG
AAGCGTATCTATATCAAGTCGGGTAATGGTTCAGCCTCATTTTTTCATTC
AAGGGACCATAAAGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCTG
ATGTCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGAG
CATCAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGCA
TGGAAAGAATGGAGAACACATACATATACATATCCCCGTGGGTACTGTGA
TTACGAACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGA
GAAGCATATACAGTTGCCAAGGGTGGATCTAAAGGTCTTGGTAATGTCCA
TTTCAAGTCACCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAA
CAGGAGAAGAAATATTTGTAGAGTTGGAACTGAAATCAATCGCTGATATT
GGCTTGGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCTCCATTGCAT
TTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAACATTGAAAC
CAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTTTCAGTTGCT
GATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGTTGGTCTTGGACA
TGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAATGTATGTTATGG
ATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAG
TTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGC
GAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATAACATAC
AACAACATGTAAACATGCCTGTTGTCCCACTCTCTGctaaattcaatcaa
aatattgaaGAGTTGAAAAGTCTTATATTGCAGAAAAGGAAATTTAAGCA
TACTAGCTAATgagaaaagaaaaacgaaaaatagaTTATATGTTATGGAT
TGCTCATCACCAGACATGCTTTCCCAGTTCGAAATCCTGAAAACGGAGTT
AGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGCTA
ATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATGACATACAA
CAACATGTAAACATGCCCTTTGTCCCACTCTCTGCTAAATTCAGTCAAAA
TATTGAAGAGTTGAAAAGTCTTATATTGCAGAAATGGAAATTTAAGCATA
CTGGCTAAtgggaaaagaaaaatgaaaaatagattaTATGTTGTGGTTTG
TTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAG
ATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGCGAAT
AAAATCGATTTGATACAAGACCAAGACGAGATGAGAAATAACATACAACA
ACATGTAAACATGCCTGTTGTCCCACTCTCTGAGTAAATTCAGTCAAAAT
ATTGAAGAgttgaaaaatcttttattgCAGAAATGGAAATTTAAGCATAC
TGGCTaatgagaaaagaaaaatgaaaaatagattatttaggttgtatttt
atttcttttaaagtatGATGTTTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000491:51610..61457-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024403 ID=TCONS_00024403|Name=TCONS_00024403|organism=Clytia hemisphaerica|type=transcript|length=9848bp|location=Sequence derived from alignment at sc0000491:51610..61457- (Clytia hemisphaerica)
CAATAATGATCATATAGCAATTTTAGATATTCTCTCTCTAAAACATGCTG
ATGTATTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTAT
AATTTCTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAA
AGAAGAAACGAAAACTAATATACGCTAAGGGTTGGTATTTACCATGTAGT
TTATTTTCTATTGTCTAAATAATAACTGTAAGTTGGTCTAATATCGACAT
CCCTCCTCTAATTCCGACACCCTTCTTTAGAGACAGGAATAATATGAAAG
CTTTTGAATCACTGATTGAAAAAGGATTATTCCTCTCAGACCACTAAGCA
AAGTAAAACAGTTTTAACCTTACTATCAATTTCAGGTGATAAAAAGGGTG
TCGGAATTAGGGGAGGGGTGTCGACATTAGACTAAGTTACGGAGGTATAT
AAGCTAATTTATTGTATGTTCTGTGATTGAAAACCTTGGTTTGAAAACTA
TAATGAGAATGCAACCTTTCCTTAATCCTAATTGGTTGATCACAAATTCC
ATTGCATTTTTCATTTTGCCAGGTAAAACATTTGTAGATTGGAAGCGTAT
CTATATCAAGTCGGGTAATGGTTCAGCCTCATTTTTTCATTCAAGGTATG
TATAACGTATTCCTATTTGAATCAAGACATTCTTATATAGAAAAACAATA
CACAAAAACAATAACATTATATAAAAGATGTGCACTAGAAAGGTGTCATC
AGCGTTTTTTGGAGCTCTTTGNCTCTATGTCTCTCCTTTCACTTTCTTCC
TTCCGTTTTTGTTCTTCGGCAGATTTTATATCTTCTTTTTGCTTCTTGGT
AATCTTGGCGTATGTTTTCTTTGATGTTTCCTTTATTATTTCTGCTGTGT
GCTTTATTTCCTCCTTTATCATGCTTCTTGTCTTTTCCTCCATCTCTTGT
AGTTTTCCTGCCAGAAAGGTTTTTAGGTCATATACCTCATTGTTCAGTTT
TTGTATGACGTCGTCTTTCTTTTGAAGTTCATTTTGCATCATATGTTGAG
TGTTTTTCCCTACTTTATTTCTTAGGTTTTTCGTTATTCGTACGCAGTTT
GAACATAAGTAATGATCGTTGTAGGATGTCACGAATATTTGTAGTTGATA
CAGGGGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNTGTTGTTTTCATGAATTTTGATGTTTTTATTTGTTTT
CAGCCATTTTTTCGAAGAGCGTTGCAAAAGCGTCTGATCTAGTTGACGTC
AAATAAAAACTGATCTTAGTAACTGATCAAAGTCAGTTGCTTAAAAAAAC
TCTACCTTTTCCGTTATAAATCTTTCAAAGCAAGCGATTAATTCTTTCTT
TCCAAATGCAAGCAATGGGAGTTACAATGGGGATCTTCCTTTTTAAAGGG
ATGGGAGGAGAGAAAAAGAAATCAAATTTAATTGTTGCATGGTAGTTCTT
AATTCTTTTTTTCGAAGTTGATTACAAATAAACTGAATGTGCATTAAGAA
ACTTGAACAAAAGACAGAATTTCGACAAACAGAGAGCTAAGGTAACTCAA
TAGCAAACTAGATTTCGGAAAGGGCTAGCTTGTTTTTACCGAGTTTGTTA
TTTATTGCTCTTTGTACCCACCTTCTAGCTGTTCTAATGTAAATGGTTTT
GACAACACAACATTATTATTTTACCAAAAAAATCATGATCGATTCTATTT
TTTTGTAGGACGAGTTTAGCTACAATATATAGACTCAATGTATCTTTTCC
TCTCCTGTTTACTTTCTACTTACATGAAAAAATGTAACTCAGGAGCGACA
CCAGAGTGCAAAAATACATAACCTGTTGAGACTTCTCTGTTCTGTATGAT
TATGAGCTTGATAAACAATAATGATCGTAAAACAATTTTAGATATTCTCT
TTCTAAAACATGCTGATGTATTGCAGAAATCATCTATCACGGTTAAAACT
CTCAAATAAAGTTATAATTTCTTCACCTCAATGCGGATGTTCCACTGAAG
TCTCCCCACCTTTAAAGAAGAAACGAAAACTAATATACGCTAAGGGTTGG
TATTTATGATGTAGTTTATTTTCTATTGTCTAAATAATAACTGTAAGTTG
GTCTAATATCGACATCCCTCCTTTAATTCCGACACCCTTCTTTAGAGACA
GGAATAATATGAAAGCTTGAATCACTGATTGAAAAAGGATTATTCCTCTC
AGACCACTAAGCAAAGAAAAACAGTTTTAACCTTTCTATCAATTTCAGGT
GATAAAAAGGGTGTCGGAATTAGAGGAGGGGTGTCGACATTAAGTTACGT
AAGTATAAAGCTAATTTATTGTATGTTCTGTGATTGAAGACCTTGGTTTG
AAAACTATAATGAGAATGCAACCTTTCCTTAATCCTAATTTGTTGATTAC
AAATTCCATTGCATTTTTCATTTTGCCAGGTAAAACATTTGTAGATTGGA
AGCGTATCTATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCATTT
GTTCACTCAAGGTATGTATAACGTATTCCTATTTGAATCGAGACATTCTT
ATATAGATATACACAAAAACAATAACATATCATATAAAAGATGTGCACTA
GAAAGGTGTCATCAGCGTTTTTTGGAGCTCTTTGTTTAAAAAGCAATTGA
AATAACAACTTTGAATTTGAAGACCCCCTTTTTAAACAGCTGTTTGTAGT
AAATTTTCCAATTCTCACAAATCAAATATTATAACAGTGTCAAATGTCAA
ATGTCAAATCAAGTGTCAAATGGAGGGGTTGCCAGTTCAATTCCAAGCTA
GGTTAAAAATTAGATAATCAGACCCTTGGACAAATGGGAAACGGGGCTAA
ACTTAAAATGTTTTTGCTTCTTTTTTATGAGAAAAAAGTGTAACCAAGAT
AACAATGATAGGTGTTTATTGCCTGGCACTAAGCACTCAAAAATATTTTG
AATATCAAAAGAGTGGACTGCGTGGATGAGTAGCAAGTCACCAAGCCTCT
TCAAATGAATGTAACAACCTCCTTGAAAACAAAAGGAAAGGTCAATTATG
GACCAATTCTTTTAGAGAAAAAAATATCTTGATTTCTATTCTATTTTAAT
TAATTTGTTAGCTCATTTTAGAAATTTAATAGGTCTTTGATCTCTCTGAT
CAGTCTGAATTCTAATTGAGAAAATTATATTAAAAAAGGAATATGTGAAA
TTCTTTCATTACGCCATTAGAGCTCAAAAAACACCAATGAGACCTTCCTA
TGTGCACATCTTAGGAATAGTTCAATTCAAATAAAAACGTTATATAATTA
TTTTTGAATTGAAACTAATGAAACATATGATTCTCATTTTACTCTTAAAA
TAATTATAAATGCTTTCTTGCAGTTTCTTAAAATATTTTTTTTTCAGTTG
GTCCCTTTGATTGTGGTCTTTTTTCTAAAACGAAATTCATTGCTTCAAAT
TAGCTCATTGAACAAATTTGATTTTTTCTTCATAAGGGACCATAAAGGGG
GGCCAGATGGTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCATTGCT
GATGATGCTTACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAA
GAATGGAGGGAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAAC
ACATACATATACATGTAAGTGTGTTAATATGTTTTTATTGTTTTTATTAA
ATGGNAAATGGAGAACACATGCATATACAGGTAAGTGTGTCAATATATTT
TCTTATTGATTAAGTGGAATGTCCTTGTTTATGTTTTTCTGTAGAAATAA
TTTTGAAACTACTTAAAAGCTACTTTGAAATATTTTTGTGGTCATGCTTC
TCTAAATATTAAAATATTATAAGCAACATAAAATATAAACATTGTTCGAG
ACATGTCCTGCACGTTTTTTTTATAAGGAACTTTAACTTGGCTCCAAGTC
TGGATTTCCTTATTTTTCCAGAGAATTTCAGCCTCAAAGTTCCTTAACGG
GGCTCTTATTTACTAAGCTGCCAAGTTTGGATTAATAGGTTACTTTGTTA
AACAATGGACTACAATACAGAAAAACGCGTTTTTCAACATTGTTTTGTCA
ATATTTATAAACGTTTTGTTTAGATTTTTGTAAACGCGTACAAGTTCAAG
TTTAACTTGTACTGTTTCTTAACTTTTTTTCTTATTCTCAGCCTGAGCAG
TTCCTTAACAATTCCTTGTTTTTTAAACCATTTTCAGCCTCAAGTTCCTT
ATAAACAACGTGTTCCTTATAAAACAAAGACAGCATGTGTGATTTTTAGA
TTTTAGATTTTTGATTTGGGATATAGTTTTTTTTGTAACTATTTTTATGT
GCCTTTCAACTGATCCAGTGACAACACTTTTTTGAATTCTTTACACTATT
GAAACATCTTTACATTTTTATTTTGGCTGCAGATCCCCGTGGGTACTGTG
ATTACGAACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGG
AGAAGCATATACAGTTGCCAAGGGTGGATCTAAAGGTAGGCACATCACAT
CTACTTTGGAGCAAAATCGACTATAATTGCAAGGTCAATTTTCTTTCTTA
TTATGTTATTTCCATTGCATGACTTTGTAATAATTCTTCATTAATTTTAA
TGATTAATTAATATAAATTAATCATAATTTTTAATTTAAGGCCTAGGGGG
TAATCCAGAAGAAAGCAACTTATTAATTAATCTTTTGTGATTCTTTTTTC
TTTACGAGATGATAGCTGTGAATGAAATAGTTGTTTTGCATTTTTGGTAA
CTTTTAAAAGGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCG
CCCAAGAGAGTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGT
TGGAACTGAAATCAATCGCTGATATTGGCTTGGTATGAGCATTTATTTGA
ATAGAGAATTAAAAATGACATCACTAGCCCCCTGTTGCAATGAAATTGCG
TCAAAANTGAAATCAATCGCTGATATTGGCTTGGTATGAGCATTTATTTG
AATAGAGAATTAAAAATGACATCACTAGCCCCCTGTTGCAATGAAATTGC
GCCAAAAATGATTTTTTTTTGTCCAATCTCTCAAAGGAATGCTCTAAATA
AGTTTGAGTTTATCAACCCAGTGATATTCATAATGGAAGTTAAATCGTAG
CTTGGATCATGAGATTTACGTTTGGCTACGTTTCGAGAGATTCTTCTCCC
ATCATCGGGAAATGTAGAGGATGTTTTCTCCACTGTTTGTACTAAGACAT
TCTGTTATGGCGCGCCAAAGCGGAAATAAATACTATCTCTCATTTCGCGA
CACTACCTTTCATTTCACGACACTATCTTTCACTTTGCGGCACTATCTTT
CATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCACTATCTTTCATTTCGCG
ACACTATCTTTCATTTCGCGACACTATCTTTTATTTCGCGACACTATCTT
TCATTTCGCGACACTATCTTTTATTTCGCCACACTATCTTTATTAAAACG
ACACTATCTTTTTTAAAACGACACTATCTTTTTTAAAACGATACTATCTT
TCCAAAAAACATTATCTTAATTGAAACAATACTATCTTTTTTACGGGATA
CTATCTTTTTTATGGAAGCCGAGAAGTGCCATCGACAAAAAAATATTTAA
TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGCCGCGAAATGAAA
GATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCG
CGAAATGAAAGATAGTATCGCGAAATGAAAGATACTATTTATTTCCGCTT
TGGCGCGCCATATTCTGTACCCATAATTATCAAGTGTAATTTCCTTGCAA
GGTGTGAATCCCCATGTTATCATAGTTGTAAGGTAAAATAGCTCTTGAAC
TTATGAGATTACTCATTACTGTGATTTCCATTTTGCCTCTCTGTTCGGTT
GGGAACCCAAATATTCTCTCAAATGAACTTTGTTTGCATTTATAGGTGGG
CTTTCCGAATGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAA
CACCAAAGATTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGT
GTGATGAATTTAAAAGATGACTTGACTGTTTCAGGTTTTTATCTTTCGTT
TCCTTGTGTTAACACATTTCTGCCTATTACTTCTTAGTAACATTACCTGA
CATTCTAAGAATTTCATAAAAGTTTGCTTGATTTTGCTCCTCAATTTCTG
AATATATGGGGTTTCAAATAATTTTCATGACTTTTAGTGGATCATGTAAA
TTTGAGATATTTTATTCTTGTTTACTCATTAAAAAACCCAAATTATTTTT
ATTTGTAACCGTTTAGTTGCTGATATCCCTGGCATAGTCAAGGGAGCCCA
CGAAAACGTTGGTCTTGGACATGAATTCTTACGCCACGTTGAACGTTGCC
ATATGTTAATGTATGTTATGGATTGCTCATCACCGGACATGCTTTCCCAG
TTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGGACTGTCAAC
AATATCATCCATCTTCATAGCGAATAAAATCGATTTGATACAAGACCAAG
ACGAAATGAGAAATAACATACAACAACATGTAAACATGCCTGTTGTCCCA
CTCTCTGCTAAATTCAATCAAAATATTGAAGAGTTGAAAAGTCTTATATT
GCAGAAAAGGAAATTTAAGCATACTAGCTAATGAGAAAAGAAAAACGAAA
AATAGATTATATGTTATGGATTGCTCATCACCAGACATGCTTTCCCAGTT
CGAAATCCTGAAAACGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAA
TATCATCCATCTTCATAGCTAATAAAATCGATTTGATACAAGACCAAGAC
GAAATGAGAAATGACATACAACAACATGTAAACATGCCCTTTGTCCCACT
CTCTGCTAAATTCAGTCAAAATATTGAAGAGTTGAAAAGTCTTATATTGC
AGAAATGGAAATTTAAGCATACTGGCTAATGGGAAAAGAAAAATGAAAAA
TAGATTATATGTTGTGGTTTGTTCATCACCGGACATGCTTTCCCAGTTCG
AAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATA
TCATCCATCTTCATAGCGAATAAAATCGATTTGATACAAGACCAAGACGA
GATGAGAAATAACATACAACAACATGTAAACATGCCTGTTGTCCCACTCT
CTGAGTAAATTCAGTCAAAATATTGAAGAGTTGAAAAATCTTTTATTGCA
GAAATGGAAATTTAAGCATACTGGCTAATGAGAAAAGAAAAATGAAAAAT
AGATTATTTAGGTTGTATTTTATTTCTTTTAAAGTATGATGTTTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013697XLOC_013697Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024403-exon-sc0000491-1575043694:61278..61457TCONS_00024403-exon-sc0000491-1575043694:61278..61457Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1575043694:60813..60885TCONS_00024403-exon-sc0000491-1575043694:60813..60885Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1575043694:56744..56921TCONS_00024403-exon-sc0000491-1575043694:56744..56921Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1575043694:55873..55975TCONS_00024403-exon-sc0000491-1575043694:55873..55975Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1575043694:55476..55597TCONS_00024403-exon-sc0000491-1575043694:55476..55597Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1575043694:52874..53012TCONS_00024403-exon-sc0000491-1575043694:52874..53012Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1575043694:51610..52641TCONS_00024403-exon-sc0000491-1575043694:51610..52641Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1510915933:61278..61457TCONS_00024403-exon-sc0000491-1510915933:61278..61457Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1510915933:60813..60885TCONS_00024403-exon-sc0000491-1510915933:60813..60885Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1510915933:56744..56921TCONS_00024403-exon-sc0000491-1510915933:56744..56921Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1510915933:55873..55975TCONS_00024403-exon-sc0000491-1510915933:55873..55975Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1510915933:55476..55597TCONS_00024403-exon-sc0000491-1510915933:55476..55597Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1510915933:52874..53012TCONS_00024403-exon-sc0000491-1510915933:52874..53012Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1510915933:51610..52641TCONS_00024403-exon-sc0000491-1510915933:51610..52641Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1491911889:61278..61457TCONS_00024403-exon-sc0000491-1491911889:61278..61457Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1491911889:60813..60885TCONS_00024403-exon-sc0000491-1491911889:60813..60885Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1491911889:56744..56921TCONS_00024403-exon-sc0000491-1491911889:56744..56921Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1491911889:55873..55975TCONS_00024403-exon-sc0000491-1491911889:55873..55975Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1491911889:55476..55597TCONS_00024403-exon-sc0000491-1491911889:55476..55597Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1491911889:52874..53012TCONS_00024403-exon-sc0000491-1491911889:52874..53012Clytia hemisphaericaexon
TCONS_00024403-exon-sc0000491-1491911889:51610..52641TCONS_00024403-exon-sc0000491-1491911889:51610..52641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000491supercontigsc0000491:51610..61457 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0216679	1.18048	0.323423	0.00321773	1.52778	0.67494	0	0	0.534425	0	0	0	0	0	0	0.0223442	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00024403 vs. Swiss-Prot (Human)
Match: MTG2 (Mitochondrial ribosome-associated GTPase 2 OS=Homo sapiens GN=MTG2 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.872e-63
Identity = 130/315 (41.27%), Postives = 192/315 (60.95%), Query Frame = 3 
Query:  183 KTFVDWKRIYIKSGNGSA--SFFHSRDHKXXXXXXXXXXXXX--VIFIADDAYSQLSHLEHQYRAKNGGNGSKKNRHGKNGEHIHIHIPVGTVITNSNSDKELADLTRKGEAYTVAKGGSKGLGNVHFKSPTRVRPREFXXXXXXXXIFVELELKSIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDLTVSVADIPGIVKGAHENVGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFEILKKELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLSAKFNQNIEEL 1115
            + FVD++R+ +  GNG A  S FHS   K       G  G    VI   D     LS +  +Y+  +G +G  KN  G++G  ++I +PVGT++      + +ADL+  G+ Y  A GG+ G GN  F +     P   T G  G++  + LELK++A  G+VGFPNAGKSSLL  IS A P +  YPFTTLKP++G+++ +  L ++VADIPGI++GAH+N GLG  FLRH+ERC  L++V+D S P+  +Q + LK EL++Y+ GLS      +ANKIDL + Q  + + ++ H+   V+ LSA   +N+E+L
Sbjct:   70 RYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGG--RVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANL-SQLRDHLGQEVIVLSALTGENLEQL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00024403 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTG21.872e-6341.27Mitochondrial ribosome-associated GTPase 2 OS=Homo... [more]
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