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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023988 ID=TCONS_00023988|Name=TCONS_00023988|organism=Clytia hemisphaerica|type=transcript|length=788bp
CGGGTCTAAACGTGaactaaaaatgtttcaaaagaaaaacacgTGTTATA
AAAAATAAGTACACGTGACCTATTACTACAACGTGACGTAACTTTAAAAT
AAGATGTTATATAATACACTCCCGAGGGACTAAGAACCTAAAATACAATT
ATATCTTTCTCGTCGACAAATTTGAGGACTGTATCGTTCTTCttggaata
ttttccttttgGTTCATTAAATTCGACTNTCTCGTCGACAAATTTGAGGA
CTGTATCGTTCTTCTTGGAATAGTTTCCGTTTGGTTCATTAAATTCGACT
GGATATAATTTCGTTATAGGACGTTTCAATAAAATCTGACGTCCGTTGCT
CATAACAGTTACTTCTGCAGCACGGATACGACCGTCTGCGCTATGAATCA
GTTTGTTGATTTTTCCCATTCTCCATAGTAATCGTTTCTTGTCTTTATCG
TACACCAAAACAACATCATTAACATTAGGTATAAATTCACGTACCTTTTT
CGTACATTTGTTATACTCTCTCAATTCAGTCAAATACTCAAATTGCCATC
TCTTCCAGAAATGTTCTAAAATTTGTCTAACATGACGAAACTTGTTTTCA
AGACTTTCATTTTCGACATTTTCGTCATTCGAATCATCAACATTGGTGGT
ATAGATATTTCGACCATACAATAACTTGTTTGGAGTTAGAGGTTCACTCA
AATCGTCAGTATACAAAAACGTAAGAGGTCGattattcaaaacattttca
atttctttcaataCAGTAATCATTTGATCATAATTCAA Run BLAST on NCBI protein sequence of TCONS_00023988-protein >TCONS_00023988-protein ID=TCONS_00023988-protein|Name=TCONS_00023988-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
LNYDQMITVLKEIENVLNNRPLTFLYTDDLSEPLTPNKLLYGRNIYTTNV
DDSNDENVENESLENKFRHVRQILEHFWKRWQFEYLTELREYNKCTKKVR
EFIPNVNDVVLVYDKDKKRLLWRMGKINKLIHSADGRIRAAEVTVMSNGR
QILLKRPITKLYPVEFNEPNGNYSKKNDTVLKFVDEXVEFNEPKGKYSKK
NDTVLKFVDEKDIIVF Run BLAST on NCBI transcript from alignment at sc0000468:67505..68292 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023988 ID=TCONS_00023988|Name=TCONS_00023988|organism=Clytia hemisphaerica|type=transcript|length=788bp|location=Sequence derived from alignment at sc0000468:67505..68292 (Clytia hemisphaerica)
TTGAATTATGATCAAATGATTACTGtattgaaagaaattgaaaatgtttt
gaataatCGACCTCTTACGTTTTTGTATACTGACGATTTGAGTGAACCTC
TAACTCCAAACAAGTTATTGTATGGTCGAAATATCTATACCACCAATGTT
GATGATTCGAATGACGAAAATGTCGAAAATGAAAGTCTTGAAAACAAGTT
TCGTCATGTTAGACAAATTTTAGAACATTTCTGGAAGAGATGGCAATTTG
AGTATTTGACTGAATTGAGAGAGTATAACAAATGTACGAAAAAGGTACGT
GAATTTATACCTAATGTTAATGATGTTGTTTTGGTGTACGATAAAGACAA
GAAACGATTACTATGGAGAATGGGAAAAATCAACAAACTGATTCATAGCG
CAGACGGTCGTATCCGTGCTGCAGAAGTAACTGTTATGAGCAACGGACGT
CAGATTTTATTGAAACGTCCTATAACGAAATTATATCCAGTCGAATTTAA
TGAACCAAACGGAAACTATTCCAAGAAGAACGATACAGTCCTCAAATTTG
TCGACGAGANAGTCGAATTTAATGAACcaaaaggaaaatattccaaGAAG
AACGATACAGTCCTCAAATTTGTCGACGAGAAAGATATAATTGTATTTTA
GGTTCTTAGTCCCTCGGGAGTGTATTATATAACATCTTATTTTAAAGTTA
CGTCACGTTGTAGTAATAGGTCACGTGTACTTATTTTTTATAACAcgtgt
ttttcttttgaaacatttttagttCACGTTTAGACCCG Coding sequence (CDS) from alignment at sc0000468:67505..68292 >TCONS_00023988 ID=TCONS_00023988|Name=TCONS_00023988|organism=Clytia hemisphaerica|type=CDS|length=651bp|location=Sequence derived from alignment at sc0000468:67505..68292 (Clytia hemisphaerica)
TTGAATTATGATCAAATGATTACTGtattgaaagaaattgaaaatgtttt
gaataatCGACCTCTTACGTTTTTGTATACTGACGATTTGAGTGAACCTC
TAACTCCAAACAAGTTATTGTATGGTCGAAATATCTATACCACCAATGTT
GATGATTCGAATGACGAAAATGTCGAAAATGAAAGTCTTGAAAACAAGTT
TCGTCATGTTAGACAAATTTTAGAACATTTCTGGAAGAGATGGCAATTTG
AGTATTTGACTGAATTGAGAGAGTATAACAAATGTACGAAAAAGGTACGT
GAATTTATACCTAATGTTAATGATGTTGTTTTGGTGTACGATAAAGACAA
GAAACGATTACTATGGAGAATGGGAAAAATCAACAAACTGATTCATAGCG
CAGACGGTCGTATCCGTGCTGCAGAAGTAACTGTTATGAGCAACGGACGT
CAGATTTTATTGAAACGTCCTATAACGAAATTATATCCAGTCGAATTTAA
TGAACCAAACGGAAACTATTCCAAGAAGAACGATACAGTCCTCAAATTTG
TCGACGAGANAGTCGAATTTAATGAACcaaaaggaaaatattccaaGAAG
AACGATACAGTCCTCAAATTTGTCGACGAGAAAGATATAATTGTATTTTA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023988-exon-sc0000468-1491911889:67505..68292 | TCONS_00023988-exon-sc0000468-1491911889:67505..68292 | Clytia hemisphaerica | exon |
| TCONS_00023988-exon-sc0000468-1510915933:67505..68292 | TCONS_00023988-exon-sc0000468-1510915933:67505..68292 | Clytia hemisphaerica | exon |
| TCONS_00023988-exon-sc0000468-1575043694:67505..68292 | TCONS_00023988-exon-sc0000468-1575043694:67505..68292 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000468 | supercontig | sc0000468:67505..68292 . |
Blast
The following BLAST results are available for this feature:
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