TCONS_00023983 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023983
Unique NameTCONS_00023983
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1479

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023983 ID=TCONS_00023983|Name=TCONS_00023983|organism=Clytia hemisphaerica|type=transcript|length=1479bp
TAGAAAAGAAGTTGAGGGAAAACAACACAGAAAGTGCAGAGGGCTCACAA
CAAAAGGGTGCAGAGGCAAAACCAAAAAGTAAAATTGATTATGCAAGAAA
CTTTCCATTGTCAGAAGAAAAGGGCAATGCTGCTTTTGTAAAGATGTATT
CCAAAACAACTAGCTTGAAATTAAACGATGTTGCTGAATTCATTTGTATC
CTTTCTGTTGATCCACATTTTGCTCAAAGCTCAATGCAAGAAGAAATGGA
AACAAACGAAGTAACATGGCATGAGTTTAACATGGAAGAGGATCGCGCAC
ATTGCCCACCCCCTTCACTTGTACCCAGACTCCATTGTTTATATTACAAC
AAGTTGGAGGAATTAAATCCAAACGTCAGAAACAATCATACAGACTACGA
ATGTGCCAGTAAAGAATTGACATCCATTCGAGCAGATCTCATCCAAACAC
TCAAAGGGCTTCTTGGAGGAGACGGAATTGCTGCAGAATATCTCCTACTT
CACCTCATATCGTCTGTATATGGTCGAGTAGGGGCAATGTGTGTTGGAAA
ATTTGCACTAAACTTGTTCAAGTTTCCAAATAGTGGCTTTTGTGAAAGAT
TGTACCAATTCATTGAGAAGATAGTTCCTAAAAGTCACTACCTTCCGATG
AGCTTGAACAATTTAAACAACAAACAGTTCATTCCATCGAAAGATTTTCA
AGCCAATAGGTTGACATCTGGAGTACTTCAACTATCAAGTGGAACCAATT
TGATTCTTGATGAAACTCAAATGGAACCAGGAAAGCTGGACACAGATGGT
GTCAAGAATTTAACAGCTCTTGGCAACTTGATTCAATGGCAGAAATTAGA
ATACGATTTCACATTCAACAGATTAGATATTGAAACAAATGTTAATGTTC
TGGTCTTGTCAGAAGGCAAATCACTTTTGAAGTGTGATTGTCAATTACCG
ATCAACTTTGAAGACACTACTAAACAAACGAATGCAACCTCAGAAAAATT
ACTACAAAAGTTTCGttattatctttccaacgttCGACAAATGAAATATG
AGCTAACTGAAGAAGTACAAAAGGCGTTAGAGGATGATTTTGTAGAGATG
AGAAAAGAGGATTCAAAAGCAATGAACGCGGATGCTTTTTACGTTTTATT
GACCACAGCTAGATATCTTGCAATAAGTCATGGGCAATCAACACTATCGG
CCGCGCTGTGGACGCGCGTTAAAGAGCTGGACGCTGATTTAAGAAAGAGA
TTGCGTTGAGGACGTTGATTGACAGACTACATGACCAGCAAGAATGAAAG
TGATGGGGAAACGACCTTATGACCTGAACTGTGATGGTGAATAATGAACT
CTACCAAATGCTTAGAAAACCACCCCCTTGACAATCTTCTCGGACAAAgt
cttgttttttttgctttcaaGCGAACCTTCACAACGAACACTGACAAACA
ATACTTTTAAACACACTAATGTATTAGAT
Run BLAST on NCBI

transcript from alignment at sc0000468:211546..220060-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023983 ID=TCONS_00023983|Name=TCONS_00023983|organism=Clytia hemisphaerica|type=transcript|length=8515bp|location=Sequence derived from alignment at sc0000468:211546..220060- (Clytia hemisphaerica)
TAGAAAAGAAGTTGAGGGAAAACAACACAGAAAGTGCAGAGGGTAAGAAT
TTTCAAACTTCCTTGATAATAATAGTTAATGCATTACTGATTCGGTGTTA
TGTAATCTTTCAATCTTCACTAAACAAATTTTTATCCTTGCAGGCTCACA
ACAAAAGGGTGCAGAGGCAAAACCAAAAAGTAAAATTGATTATGCAAGAA
ACTTTCCATTGTCAGAAGAAAAGGGCAATGCTGCTTTTGTAAAGGTACAT
TATTATTAATATTGTATTACAGCAATTTTCGAGTTGCTAAATGTTCTCTA
ATGCGTAGATAGTCTTGTGTTGGGGCTCCTTAGGAGATGATTAAGATTAA
GATTAAGATTAAGATTAAGATTATCTACTCAGGGTATTTTTCAAGCATTT
TTTACCACCGTTTTGGTCCGAAAAATTAAGCTTCGATGCAGTGGTTTTAA
ATGTGGTTAACCATGGTTTGGCAAGGAAGAAAATTTTTGCCCTGTGAACG
ACTTTGATAGGTGTTTTCATGTGTCTATAAAATAGCCTAGAAATTCTAAC
TTGGTTTAAAAAAATAACCTTGCTACTTGTTAGGCTCAGTGCAATATATC
AAGAAAACTCTATCTTTTGTGTTTTGTAGATGTATTCCAAAACAACTAGC
TTGAAATTAAACGATGTTGCTGAATTCATTTGTATCCTTTCTGTTGATCC
ACATTTTGCTCAAAGCTCAATGCAGTAAGTCTTTATTGAGAACAGTGTCT
AGGATTTACTCTTGAACACCTTACAAATAATTTGAAATCCAGTCTAAAGG
CTGGTCTCCACTTTCGCGCGACATGAGCGAAATCTGTTGATGTTTTTGTA
AGCTCATTGGTCGGTTGAAAAATGAGGCAATTTTCAAAATTGACGTAACG
GTTGAAAAAACTTGAACTTCCTGAACTTTTTTTTGTTTGCCCGAAACTCT
TTTATGACGTAATCTTTTCTTTAGGCAAAAAAGGTTGAGAAAAGACCTGT
CGCCCAATTCGCTTGAAAGTGAATACCAGCCTTAAAACCCTAAAAATAAT
TCTGTTTAATTCCTCTGGGACTTAATATTCTACTTTTTTAACAGCCTAAA
TACAAAAGTCTACTTGAACAGTTATCATAATAATCATAAAGATCTTTTCA
TTAATAAAATAAGAGCCGAAGACTATTTTCGAAACCAAATTTAAATTACA
GAGAAGAAATGGAAACAAACGAAGTAACATGGCATGAGTTTAACATGGAA
GAGGATCGCGCACATTGCCCACCCCCTTCACTTGTACCCAGACTCCATTG
TTTATATTACAACAAGTTGGAGGAATTAAATCCAAACGTCAGAAACAATC
ATACAGACTACGGTATGATATTCGTCTACGTCATAGTTATATGGAAAAAA
ATTGAAAAAAGTTAACTTTAATCATTATTTTCTAACAAACAAATAAATTA
TATTTCTTTTGCTAAAAGAGATCAATTCACCTTTTCGACCATAGCCGCCA
ATTGCTGCGCTGACATTTTTTTTTTTATTTTACCACCCTAAAACCATCCC
AGTCTGACAGTGCGCACCTATAGACAACAGAAAAAGGTGTAAAAAAAGGA
TTGGATCGAGTTTAGGGGGATAATTAAATAATAAAGTGGCACACGACTGA
CCTTGGGACTATGGTCGAAAAGGTTTATTCCATAATTTTACTTGAACCAA
TTGAAACCACATTGCTACCTTTTTAATGCAACATAATTGTCGATTATCTT
TGAGGGAGGGGGAACTGAATCCTTTAGTTTAGAAATCCCAACCTCCTATA
GATCATTAAATGTTTTCCTGCCAAATAAATCGAAAGTGTTGCTCTGTCGC
TCCAATCAACGCTTGTGCTAAAAGTTTCTAGTATTCAAAAGATAATGTTC
CTATGCAAACTTGTCTAATAATCTAATCCATGTCGAAAAGCTAGCATGCA
TAAATTAGAATGGTAAGTATAATAATTCAGAAACATAACACCATTCCCAA
AATATTACATTTTAACTTGATTGTAAATTTCTTCTATATCATTGAAGTAA
TGAAAAGGTTTAGAAAACAAAAACCTTATCAAAATATTTTCTGTGATGAG
AATTTGTGTTACCAACTTTTTAGCACCCATCCCCATGAATAATAAATGTT
AATTTCTTTTCAATAACATGTCTGGAGACTTCGATTTGTAAGTTGAAACC
TTTTTCTTTGTGTTCATGAAGATGACTCTTTAATTAATAATGATTTGGTT
GTGTCTACAAATGAAATGTTAAAAAACTTTCAAAAATATTCTGTTTTCCT
CTTAGATTATCTTTCCAGGAAAGAGTAAAAAAAACAAAAAATATTCAAAA
ATAGAACAAAAGGGTATTTTAGACAAGCTTGGTGACTTTTGTTTTTTTGG
CACCAAATCTAGAAGAGTTGATCCCTAACTCGTTTATAAATTTCAAATCA
ATATGAAAAATTCTTGGCTTTGCGTGTATTGATGGTGATTGGTCAAGTAA
CATATTATTCATTTTTTAGAATGTGCCAGTAAAGAATTGACATCCATTCG
AGCAGATCTCATCCAAACACTCAAAGGGCTTCTTGGAGGAGACGGAATTG
CTGCAGAATATCTCCTACTTCACCTCATATCGTCTGTGTAAGATCTCTCT
TTAATTTGGCATCTCCCTACCTTGAAAATAGCAGTCTGCTCTCACTTGTG
GGCATCCAGATAGGCCTAGAAGTCCACAGCCCTCTTGATTTTCCTGCTCT
TTAATTGAGGCTAATATCAAGTATTTTGATTGTCTACCACTCAAACAACA
CACTAAAATTGCCTTAAAGATTGAATTACATTTTAATTCCTTCTTTAAAA
ATCAGAAGTAAAAAATTGATTCACAATTTTGACCTGAAGAGAGGGATCTT
ACTTATCACACTCAATCAGTTTTTGGAGGTGCAATTTTCCTTTTAAACAC
TTAAAGAAAGGAGGCGGTTCGAATTATGTTTTATCATAATTCACCATAAG
TAACTGCTATTGAAAGAAATACTTTTAGTTTGAATTTTTTGTCAGCGTCA
ATACTCTGGTTTATTGCCTGTATAATGTACTATAATACTAATATTGAGAA
AAAGAGAATCTTGTAGAAATTTGTTAATGAATTACCGTTTTGCTTATTAC
TAGATATGGTCGAGTAGGGGCAATGTGTGTTGGAAAATTTGCACTAAACT
TGTTCAAGCTTCCAAAAACTTCCAGATAGGCCTAGAAGTCCACAGCCCTC
TTGATTTTCCTGCTCTTTAATTGAGGCTAATATCAAGTATTTTGATTGTC
TACCACTCAAACAACACACTAAAATTGCCTTAAAGATTGAATTACATTTT
AATTCCTTCTTTAAAAATCAGAAGTAAAAAATTGATTCACAATTTTGACC
TGAAGAGAGGGATCTTACTTATCACACTCAATCAGTTTTTGGAGGTGCAA
TTTTCCTTTTAAACACTTAAAGAAAGGAGGCGGTTCGAATTATGTTTTAT
CATAATTCACCATAAGTAACTGCTATTGAAAGAAATACTTTTAGTTTGAA
TTTTTTGTCAGCGTCAATACTCTGGTTTATTGCCTGTATAATGTACTATA
ATACTAATATTGAGAAAAAGAGAATCTTGTAGAAATTTGTTAATGAATTA
CCGTTTTGCTTATTACTAGATATGGTCGAGTAGGGGCAATGTGTGTTGGA
AAATTTGCACTAAACTTGTTCAAGCTTCCAAAAACTTCCAGATAGGCCTA
GAAGTCCACAGCCCTCTTGATTTTCCTGCTCTTTAATTGAGGCTAATATC
AAGTATTTTGATTGTCTACCACTCAAACAACACACTAAAATTGCCTTAAA
GATTGAATTACATTTTAATTCCTTCTTTAAAAATCAGAAGTAAAAAATTG
ATTCACAATTTTGACCTGAAGAGAGGGATCTTACTTATCACACTCAATCA
GTTTTTGGAGGTGCAATTTTCCTTTTAAACACTTAAAGAAAGGAGGCGGT
TCGAATTATGTTTTATCATAATTCACCATAAGTAACTGCTATTGAAAGAA
ATACTTTTAGTTTGAATTTTTTGTCAGCGTCAATACTCTGGTTTATTGCC
TGTATAATGTACTATAATACTAATATTGAGAAAAAGAGAATCTTGTAGAA
ATTTGTTAATGAATTACCGTTTTGCTTATTACTAGATATGGTCGAGTAGG
GGCAATGTGTGTTGGAAAATTTGCACTAAACTTGTTCAAGCTTCCAAATA
GTGGCTTTTGTGAAAGATTGTACCAATTCATTGAGAAGATAGTTCCTAAA
GTTAGTATCATTTATAGTTTTTGTATTAATACCACGTTCTTGATTTTGTT
TTATTGACGTGCCTGAAACAAACATACAAAGAAAACAAGTTGTAAATTTC
ATACCTAAAGTTTCATACGATAAGATAGCAATCTTCATTGAGTACTCTTA
TTGGTTTTCGCTTACAAAAAGAATGTACATCAGATATGTTCTATGTTTCT
GGGACAATAAATCCCCTGTCTGAAAAAGTAAGGAAAACTAGCCATTCAAA
TTGTTATTGACAGACCTTTTCCAAGTACAGTTTCATTNAACTTCCAGATA
GGCCTAGAAGTCCACAGCCCTCTTGATTTTCCTGCTCTTTAATTGAGGCT
AATATCAAGTATTTTGATTGTCTACCACTCAAACAACACACTAAAATTGC
CTTAAAGATTGAATTACATTTTAATTCCTTCTTTAAAAATCAGAAGTAAA
AAATTGATTCACAATTTTGACCTGAAGAGAGGGATCTTACTTATCACACT
CAATCAGTTTTTGGAGGTGCAATTTTCCTTTTAAACACTTAAAGAAAGGA
GGCAGTTCGAATTATGTTTTATCATAATTCACCATAAGTAACTGCTATTG
AAAGAAATACTTTTAGTTTGAATTTTTTGTCAGCGTCAATACTCTGGTTT
ATTGCCTGTATAATGTACTATAATACTAATATTGAGAAAAAGAGAATCTT
GTAGAAATTTGTTAATGAATTACCGTTTTGCTTATTACTAGATATGGTCG
AGTAGGGGCAATGTGTGTTGGAAAATTTGCACTAAACTTGTTCAAGTTTC
CAAATAGTGGCTTTTGTGAAAGATTGTACCAATTCATTGAGAAGATAGTT
CCTAAAGTTAGTACCATTTATAGTTTTTGTGTTAATACCACGTTCTTGAT
TTTGTTTTATTGACGTGCCCGAAACAAACATACAAAGAAAACGAGTTGTA
AATTTCATACCTAAAGTTTCATACGATAAGATAGCAATCTTCATTGAGTA
CTCATATTGTTTTTCGCTTACAAAAAGAATGTACATCAGATACGTTCTAT
ATTTCTGGGACAATAAATCCCCTGTCTGAAAAAGTAAGGAAAACTAGCCA
TTCAAATTGTTATTGACAGACCTTTTCCAAGTACAGTTTCATTTGTTTCC
CCTTAGAGTCACTACCTTCCGATGAGCTTGAACAATTTAAACAACAAACA
GTTCATTCCATCGAAAGATTTTCAAGCCAATAGGTTGACATCTGGAGTAC
TTCAACTATCAAGTGGTAACTGCTAATATTTTTCTAATGACATGATACCG
CATAATATGTTTACCAAATTTCAGGGCTTTTCCCCAAAACAGCAGTTTTG
GAAGCTTAGCAATGTGACTAGTTGATTTTGGATTAATTCTCGTTAAATGT
TTGATCATCATAGGTGTTCACCTTTGGGAAAACTTCGGCATTAATCGGAT
TTTTTGTCACATTGGATTTTTGACACACCACTGCTCCCCTTCCTTAACTT
TTTTCTACTTAAAAATTCAATTGCATTTCCTGAAGGGAAATATCCTTGAG
AATGTGCATTTTCTTTTTCAAAGGTTTTTTTCATGTACGAAAGTTGGTCT
AATCTCGACATCCCTCTTCTACTTCTGACACCCTTCTTTAGAGATAGGAA
TAATAGGAAGGTTGGAATCGCTGATTGAAACTAATTTCCTTCCCATAGCC
ATCAGGGAGGAAAAAATCTTTTGTCAATCAGCGATTCCGACGATATTTTT
CATATCTAAAGCAGGGTGTCGAAATTAGAAAGGGATGTCGACATTAGACC
ATCATCTAGTACTTTACGGTACTTACGGTATTTTATAGATTTTCGCCTTC
CATGTTTAATCTTCTCAATGAATAGTCATAATCTTTTAGGAACCAATTTG
ATTCTTGATGAAACTCAAATGGAACCAGGAAAGCTGGACACAGATGGTAA
ATACAAAGTCCCATTTATGTTTTTCCTTGAGAATTTGATGAGCTATATCA
GGTTTTTCTTCTAATTATGCAGTATAGCAAACTAATAATCTGACACCTTC
TCTAATACGTCTTGGTCCCTCCCTTGTAGCTCGAATTAGAGAGAGTCGAT
CGTGTTTTCATGAACTGATTACAATGTATTCTCCAAATACATAATCCAAA
GAAAAGCCAATAACGATTCCAAATAAACTAAAAACTCCATTATGACGAGC
TTGAATAATTAATCGATAGTTTGAAACTCAAACCTTAAGAGATCAGAAAA
CGAAAGAAGGATCACTTCCTTTATTCGAACTTATTTTTTTCTCTGTGATG
ATTTCAGGTGTCAAGAATTTAACAGCTCTTGGCAACTTGATTCAATGGCA
GAAATTAGAATACGATTTCACATTCAACAGATTAGATATTGAAACAAATG
TTGTAAGTCTAATTGACTCGGTAGAAATAAAATAAGGAGCCAAATATAAA
TGGAAATGGAAAAAAATCGCCTGTTTTAACGGTTTTTGCGGGAGCGGGAG
TACCAGTTCTGAGACACAAGGGTGCATTACCAGCCGAAAGGTCTATAGAC
CTTTCAAAAGTTCCCTAAAAAAGCGAAATGACAACATTTTAGGCACTGGG
AAATTCTCTCAACTGACATCATAAGATCTCAACCAAAATCACTCAAAATA
CAAAAAAACACTGAATTGGCTAAAAACTGGTTCCGAAAATTTACTTGGAC
TTTTCATTAGGTTTTTACCAGGATTGCGATCAATTGTTCATAGTCATGCT
ATGCTATCTTTTGGTTGTTCCTAGTTTTGTATTGTTCAATAAATTATTAA
TAATTCGAAAGTTATTGATTATTGTTTTTTTCCAGAATGTTCTGGTCTTG
TCAGAAGGCAAATCACTTTTGAAGGTAGGATGTCTGTAGATTTTTATGTC
GTAAAGTAAGAATACATATACTTTTCAATGGTAACTGGGAAGAATTTTCA
TAACAACAGGTCTTTACTTTTGTTTGAATAAGCTTAAAATTTGAAAAAAA
ATTGAGTGTAGTACTTCTACCTTTCAATTCAAAACTGTTTCAGTTGAACA
ATCAATTGACCTTACACGCTCTGTTTTTAAGCTCAGCATTCTTTTAATAT
CAATATATACCTCGATTTAAACACAGCCAGCCTTCCTTCAATTAAAAAAT
AACAGCATCATGTTTTAGTGTGATTGTCAATTACCGATCAACTTTGAAGA
CACTACTAAACAAACGAATGCAACCTCAGAAAAATTACTACAAAAGTTTC
GTTATTATCTTTCCAACGTTCGACAAATGAAATATGAGCTAACTGAAGAA
GTACAAAAGGTATTTTAGTGTGAAATGCTGTTTTTTGTAAGACTATTAAA
GTCGAGGCTTTTCTTTATATTTTGATTTTAAAGATGTCTTTGATAAGCCT
CGGTTTCTTTAAAATGTGTATTAAGTGGGCATTTTCCTCAGTCGTCTATA
TATTCTTAAAGCGTCCATTAGCTGAAACAGGATAATGTTTTGCATCTTTC
ATGCAAAACGCAACAGTACAAAGTATCCAATTTAATACCTATGTATCCCG
TTGAAATTAGTATAGAACAACTAATGACATGTTTTTCATTAATTTCATTA
TAGGCGTTAGAGGATGATTTTGTAGAGATGAGAAAAGAGGATTCAAAAGC
AATGAACGCGGATGCTTTTTACGTTTTATTGACCACAGCTAGGTGAGTAT
GGTGTTTGAGCTAAGATTGTAAAACTGGCATCGAAAGTTAAAGTCGTTTT
AAATTTAAGCCAAATCTGTGTCTCAAAAGAGTAAATATTTGACTCAACCA
AAATTCACTTAGCGTAGAAAGAATTTCGTAGAATTTAGAATCGTTTTCTT
AAGACTAAAGTTAATTATAGACACTGTAGTTTTCAATCTTTGTTTCAGAT
ATCTTGCAATAAGTCATGGGCAATCAACACTATCGGCCGCGCTGTGGACG
CGCGTTAAAGAGCTGGACGCTGATTTAAGAAAGAGATTGCGTTGAGGACG
TTGATTGACAGACTACATGACCAGCAAGAATGAAAGTGATGGGGAAACGA
CCTTATGACCTGAACTGTGATGGTGAATAATGAACTCTACCAAATGCTTA
GAAAACCACCCCCTTGACAATCTTCTCGGACAAAGTCTTGTTTTTTTTGC
TTTCAAGCGAACCTTCACAACGAACACTGACAAACAATACTTTTAAACAC
ACTAATGTATTAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013468XLOC_013468Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023983-exon-sc0000468-1575043694:220019..220060TCONS_00023983-exon-sc0000468-1575043694:220019..220060Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:219817..219917TCONS_00023983-exon-sc0000468-1575043694:219817..219917Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:219337..219431TCONS_00023983-exon-sc0000468-1575043694:219337..219431Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:218699..218859TCONS_00023983-exon-sc0000468-1575043694:218699..218859Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:217424..217541TCONS_00023983-exon-sc0000468-1575043694:217424..217541Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:214905..215019TCONS_00023983-exon-sc0000468-1575043694:214905..215019Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:214496..214604TCONS_00023983-exon-sc0000468-1575043694:214496..214604Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:213815..213871TCONS_00023983-exon-sc0000468-1575043694:213815..213871Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:213359..213453TCONS_00023983-exon-sc0000468-1575043694:213359..213453Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:212887..212925TCONS_00023983-exon-sc0000468-1575043694:212887..212925Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:212452..212592TCONS_00023983-exon-sc0000468-1575043694:212452..212592Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:212069..212157TCONS_00023983-exon-sc0000468-1575043694:212069..212157Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1575043694:211546..211862TCONS_00023983-exon-sc0000468-1575043694:211546..211862Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:220019..220060TCONS_00023983-exon-sc0000468-1510915933:220019..220060Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:219817..219917TCONS_00023983-exon-sc0000468-1510915933:219817..219917Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:219337..219431TCONS_00023983-exon-sc0000468-1510915933:219337..219431Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:218699..218859TCONS_00023983-exon-sc0000468-1510915933:218699..218859Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:217424..217541TCONS_00023983-exon-sc0000468-1510915933:217424..217541Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:214905..215019TCONS_00023983-exon-sc0000468-1510915933:214905..215019Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:214496..214604TCONS_00023983-exon-sc0000468-1510915933:214496..214604Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:213815..213871TCONS_00023983-exon-sc0000468-1510915933:213815..213871Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:213359..213453TCONS_00023983-exon-sc0000468-1510915933:213359..213453Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:212887..212925TCONS_00023983-exon-sc0000468-1510915933:212887..212925Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:212452..212592TCONS_00023983-exon-sc0000468-1510915933:212452..212592Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:212069..212157TCONS_00023983-exon-sc0000468-1510915933:212069..212157Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1510915933:211546..211862TCONS_00023983-exon-sc0000468-1510915933:211546..211862Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:220019..220060TCONS_00023983-exon-sc0000468-1491911889:220019..220060Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:219817..219917TCONS_00023983-exon-sc0000468-1491911889:219817..219917Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:219337..219431TCONS_00023983-exon-sc0000468-1491911889:219337..219431Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:218699..218859TCONS_00023983-exon-sc0000468-1491911889:218699..218859Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:217424..217541TCONS_00023983-exon-sc0000468-1491911889:217424..217541Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:214905..215019TCONS_00023983-exon-sc0000468-1491911889:214905..215019Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:214496..214604TCONS_00023983-exon-sc0000468-1491911889:214496..214604Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:213815..213871TCONS_00023983-exon-sc0000468-1491911889:213815..213871Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:213359..213453TCONS_00023983-exon-sc0000468-1491911889:213359..213453Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:212887..212925TCONS_00023983-exon-sc0000468-1491911889:212887..212925Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:212452..212592TCONS_00023983-exon-sc0000468-1491911889:212452..212592Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:212069..212157TCONS_00023983-exon-sc0000468-1491911889:212069..212157Clytia hemisphaericaexon
TCONS_00023983-exon-sc0000468-1491911889:211546..211862TCONS_00023983-exon-sc0000468-1491911889:211546..211862Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000468supercontigsc0000468:211546..220060 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
121.593	122.582	123.783	112.851	27.6629	19.9027	19.6916	22.0092	32.0366	30.6285	31.5101	29.1955	26.5165	25.0705	29.3751	29.8335	32.118	34.0323	10.1856	10.2139	24.782	20.8404	49.2796	47.2054	44.6293	48.5592	17.4116	11.3212	21.0332	24.0805
Blast
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BLAST of TCONS_00023983 vs. Swiss-Prot (Human)
Match: MCMBP (Mini-chromosome maintenance complex-binding protein OS=Homo sapiens GN=MCMBP PE=1 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 2.534e-103
Identity = 177/401 (44.14%), Postives = 247/401 (61.60%), Query Frame = 3 
Query:   99 NFPLSEEKGNAAFVKMYSKTTSLKLNDVAEFICILSVDPHFA--------QSSMQEEMETNEVTWHEFNMEEDRAHCPPPSLVPRLHCLYYNKLEELNP---NVRNNHTDYECA-----SKELTSIRADLIQTLKGLLGGDGIAAEYLLLHLISSVYGRVGAMCVGKFALNLFKFP-NSGFCERLYQFIEKIVPKSHYLPMSLNNLNNKQFIPSKDFQANRLTSGVLQLSSGTNLILDETQMEPGKLDTDGVKNLTALGNLIQWQKLEYDFTFNRLDIETNVNVLVLSEGKSLLKCDCQ-------LPINFEDTTKQ-TNATSEKLLQKFRYYLSNVRQMKYELTEEVQKALEDDFVEMRKEDSKAMNADAFYVLLTTARYLAISHGQSTLSAALWTRVKE 1226
            NFPL  EKG A  VK+Y      K+ND+ E   ILSVDP  +         S++ + ME  +        EE R H PP SLVPR+H +   KL+ +NP      N      C        EL+ +RA+L+  L   L GD +AAEYL+LHLIS+VY R   + +GKF +NL   P NS F E LY+ I+ +VP S  L M++ N+N+ +FIP KD+ ANRL SG+LQL S T+L++DET +E G+LDT GV N+TAL NLI WQK++YDF++++++   N+NV + SEG+SLL  DCQ       +P N E+      +A    +L KFR YL+ +R ++Y +++E+ KA+EDDFVEMRK D +++ AD  + LL  AR L++S GQ+TLS   W R K+
Sbjct:  228 NFPLPGEKGPACLVKVYEDWDCFKVNDILELYGILSVDPVLSILNNDERDASALLDPMECTDTA------EEQRVHSPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRAELLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLLSAVLPSVLNKFRIYLTLLRFLEYSISDEITKAVEDDFVEMRKNDPQSITADDLHQLLVVARCLSLSAGQTTLSRERWLRAKQ 622
The following BLAST results are available for this feature:
BLAST of TCONS_00023983 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCMBP2.534e-10344.14Mini-chromosome maintenance complex-binding protei... [more]
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