TCONS_00023035 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023035
Unique NameTCONS_00023035
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2023

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023035 ID=TCONS_00023035|Name=TCONS_00023035|organism=Clytia hemisphaerica|type=transcript|length=2023bp
AGAGGACTAAATTTTAAGGAAGTGTATTATGTAAACTAAGCGATTCGTTA
GTTAAGAAGTACAAGCTCGTCTAAAAGGTAAGATAATCCAATATGGCGGA
CACTGGAAaggaaaatcagaaatttgatgACCAAACGATCAAGCTTTATG
TTGGAGGCATAGATACATCATGGGACACAGAAAAGATTCAGAAAATTTTA
GGAAACGATGGTATAAAAAGAGTCGATGTTGTCAAAAACTATGCCTTTGC
AtttGTCGTGAACAAAGAAAAAGCTGACAACATTATAACACAATACAGTG
GCACCAATATTGATGGGTGTAGGATTAATATACAGatttcaaagaACAAA
CAGAATCTACCAGATAGTGAAAACCTTTGCTTTGAGTGTGGAAAACCCGG
TCACTGGGCTAAAGAATGCCAACTAAGAATtGATCGTTATGCACGCCTTG
ATAGACCTCCACCCAGAGGTGGCTTTCGTGGTAGAGGCCGTGGGCGTGGG
GATTATGGTGGCCGTGGTGGTTATGGTGGCCGAGGGGGTTATGGTGGCCG
AGGAGACTATGGTGGCCGAGGTGGAGGAAGAGGAAGAGGTGACTACGGCC
GTGACACCTACCAGAGGGATCCTTACGCCAGAGACCCGTATCTTCCGAGG
GACCCTTATGCAAGAGATCCATACCCGAGAGACCAACACAGAGATTCTTA
TGGAAGGGACCCTTACTCAAAAAGTGGATACAGGGAACGCAGCCCGCCAA
GAACATATGATTATTCAAGAGCACCTGCATCTGACCCATATGCTGCTGAA
AGAAGACGTTTAGCTTACGGGGACTCCACCCCTTCTAGTAGCTCCGCTCC
GTATGCTACTCAAAGTAAACGGGCTGATCCTTATGCTAGTGGTCAAAGCC
AACGAAGTGACCCCTATGCCAGCCAGCGAAGTGACCCCTCTGCTAGCCAG
AGAGGTGATCCCTATGCTAGCCAAAGAAGTGATCCCTATGCTAGCCAAAG
AAGTGACCCCTATTCAAAGGAACGATCTGCTCCCTACGCCAGCCAAACGA
CTGACCCTTATGCTACAAGCAGACCAGTACAAAGTCAGCAAGTTGCTTCT
GCGCCGTACGCCACACAAAGTCAAGCATCGACTGCAACTTACGCTACGCA
AAGTTACGCTGCCACTCCATCTTATGCTACACCTGCACGTACCGCATCCT
ATTCCTCTTATCCAGCTCAGACCCAATCAAGCTCCGCATATGCAACTCAA
AGTTATGCAAGCTCCTCATATGCCACTCAAAGTTATGCAAGCTCTTCATA
TGCAACTCAAAGTTATGCAAGCTCTTATCCTGCTCAAAGTCAATCGAGTG
CCGCGCCTTACGCCACTCAAAGCCAAAACGGTGGAGCTCGTTATGCAACT
CAAAGTTATGCTCAATATGCAGCAGACTCACCGACAAAGAGTTTGCCTTA
TCAGCAATCCACTAGTGTTTCTTCTGCTTCCTATGGCACCTCAGCTTCAG
CATACAGTGCACAACCTGCGGCTGCTACTCCTGGCTCTGCATCAGCTGGC
TACAGTTACAGTTACCGCTAGATACCAGGTCGAATGCGTGATTCAAATCC
AAGCTCTTACGAAGGAAAATCGAGTCGTGTCGAGTCGTGTCGTATGTCGT
ATGTCGGGTATTATCGGAAATTTATCGCGGAATATCAAGGCTTTACTTAC
GTTCGACgggaaaaagacaaaaaataacaacagATAGTACAAATAAATTA
AGGACGACggactttcttttttatttcgaacTCGACGTATCGTTTTATCG
CTTTTTTTACTCGCGTATCACTTTTCGTGGTGCATATATGTGATTTATTA
CTGAAATACTTTTTACCTCTTATATGAAAATCATGTTCTAATTGTTATGT
GTCTACGTagatgtcccaaaaaaagcggaaatatttttataaaaagtcgA
AACTCATTATCTAAAATGAGCtaaataattgaaataagagTACAATTCTt
tgttcaatcaatagatattcaat
Run BLAST on NCBI

transcript from alignment at sc0000439:116940..136568+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023035 ID=TCONS_00023035|Name=TCONS_00023035|organism=Clytia hemisphaerica|type=transcript|length=19629bp|location=Sequence derived from alignment at sc0000439:116940..136568+ (Clytia hemisphaerica)
AGAGGACTAAATTTTAAGGAAGTGTATTATGTAAACTAAGCGATTCGTTA
GTTAAGAAGTACAAGCTCGTCTAAAAGGTAAGATAATCCAATATGGCGGA
CACTGGAAaggaaaatcagaaatttgatgACCAAACGATCAAGCTTTATG
TTGGAGGCATAGATACATCATGGGACACAGAAAAGATTCAGAAAATTTTA
GGAAACGATGGTATAAAAAGAGTCGATGTTGTCAAAAACTATGCCTTTGC
AGTAAGTTTCAATATTATGATGCGATGAAAAAACGGGTTTGCTTATTATT
TTATTTGACGCtcatgaaaatcttcaattttaggtccaactttaacaagc
aattgttctttgtgtagttgagctataaaattaattatttttgagtaatc
tgtagctttcttttagctttccaaccatacataatatgcaggtgtaatat
tctacacttttgtctaaaaattcgtTCCAACAAGGCCATTTTTAGAAAAA
TTAGATCTGCGGGACACAAAAAATTTCACAactcatctttgatttcaaag
cgctgcggaggaaaaaatgttcagacagtgaaactttccatatttatcag
aaaatacctgagaaatccaatggtgctactatgctctgaaattaattctt
tcattaaagttattaatttgtactttttcatactttggcaaacattttca
gcctgaaaacaAGGAatagaattatagagagtggtaccactgaaaaattt
gacccttttttagcctaaaacagttatttatatgccatggggaatttttc
ctccgcagcgctttgaTTACACAAAGATAGGTAAgttcagcaattttaac
ttccGCTTAATAACGtttaattggtcagcctaagctgagcattcaaatag
gtaaaattcagttcttccatcatcataagacgacaaaaaaaaaaNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTTTTA
GATGTACTTCTTGGagttattattttgaattataaCTTTTCTCGGTCCTC
TGCAATTCTTTTTGGCATTGTTAGTTATATTGCATTTTACATGTGCTGGT
TTTCACgaggtttttcattttttatgaagtATCATACATGATTTGTGATG
GATGTTGTTCTGTTGACTGCCAACAAAGTGTTAATTGCTCTGTAAAACAG
CGGTCGCACCAGTTTGCTCTGAAGCAAACTGTGACCtagtacataatttt
aaataagttatcaaatgtttcacattttgtacattattcaacatatttag
tctactctgtttcagtgcatatcttacatctgttaacccacttatcgACC
GCCGAAGGCGGTTAATCGACCGCCTGAAGGCGGTTTTTTACCGTCGTGTT
TTTGTTTACGGAGTTGGGAGGTTGAaagttgaaatcgaaagtgaaatcaT
GCAGCTTAagttaccatctttaattttcatttttggtggCTGAATATTAG
GGAGATAACCACGCAAATATTTAAGAGATATCCCGCGTGTACGGTGGCCC
AGAGAGGTATCGGTGGATGGTACGGTGGCTTAGAAAGTTCAGCGTGTTAG
CTAGGATGCAAGCGTTTTGATTTCAGAGGTAGTCTTTGTTTTTAGATGTA
CTTCTTGAagtaattattttgaattttaacttttctcgGTCCTCTACAAT
TCTTTTTGGCATTGTTAGTTATATTGCATTTTTACATGtgctgtttttca
ttttttatgaagtATCTATCATACATGATTTGTGATGGATGTTGTTCTGT
TGACTGCTGATGAAGAAAGTGTTAATTGCTCTGTAAAACAGCGGTCGCAC
CAGTTTGCTCTGAAGCAAACTGTGACCTAGTTTCCCGAGCTGTATACGGG
TAAAAaagttggattcaaaatttgtcacaactgtgctatccttttgaata
ttttaaaatttgactcgCCCATTCTGCACGTTTTGCAGAATNNNNNNNNN
NGAATTTTGTCGGTTAAAGGTTTGAGCAGCTGAGACAAATTTGAGATATT
TGTAGAATCGCTTGTTTTCTGAAATGTGTGGCGTTTTACTACGGAGATAA
TAAAAGCATTTTTTCGGAGATAACGATGTTTATCATGAATAGATGAAAAA
CATGATGTGGCGCCCCGCTAGGGAGATAAatgttaagtaaataaaaatac
ttaaagtatttatcagcttctgattcaaaccacaagtgattaaacAACTC
AAAATATACTATACTAGCTCATCAAATTCCCAGAACTTACAAGGCATCTt
acacatgtttttttataagcatacaaaaatccgaaaacaggctcagagat
gcttaggtccaaagcttaataaggctgaaaaaagcTTGAGTGGATGCCTA
AATCTAAAACACAAATTTAGGGAATTActgaaattccagccaaaatcggg
aaaaaaacatttttcgtaggcccaagtaatgtttgccatatgcttaattt
ttccccatatctgagcctagatatgcttataagtgcaatgcttataaaaa
atatccatattttcaagttaaatcacgCAAACGAGAGTGTCGAAGTAGAT
CATTGTCTAAACCGatgaattcttcatcaaatttaaggcggtcgttatcc
agtgatgtgagcactgttctagttaaagctatctagctaagctctattgg
ctgaccttccagcctcggctggtttattgttttttgcaatgcaatgcctt
ctttttcaaaaaaatgtcttttcttttcttccttgaagtgttagcaagcc
attacaaaaagaatttgataaaagtctgcagtcaaaatgaagatatctgg
aatatcttgactcaatacaattgcttgaattttcaatttttgcagcaTAT
GTCGGTTCCATTTTatatgccatttctgggctaaattgtcaacctcaaat
gtctaaaaaggtgctattttagcggaaccaaaatctcaatatctccggag
cggaaccgcttatcattaggaggtgtatgacccgtcattttttttctttt
ttgaagctctacagtacaagatgaactaggtttgattgccaccacaatag
tttcaatttgaccctggaatggctaaTAGGACTTTACTTAAAACGTAACT
CCTACCACcgtgtgaagtcgggtaacatAACTtgtgcatcagtggaggga
aacttacatagccctcaaatgaatgacctggttggtcattaaaatacaaa
gttaaatcaaaacaaaaatggtagaaatgAGTAGAGCTAGGGTAggccag
acccgatcaatcgaacttgttgaACCAATCGaccaatcaaactaatcgaa
ctccatcgaacaaTTAAAGTACGATTTAAAAGATTAAtcaaacctaatcg
aacactcacaatttttgaagcaatagcagttcaaTTAGTTCAGTCAGTAA
AAGCTtcaattagttcgatgatattaaatccctcgcttgcaaaaaacTTT
ATCCTGGCACCACGCGTGTTCCAAAagacaaaacaatggaaatgcgTCAA
TCCGTTCAGCTGAccaaaatgacacaaaaatgacaaaatgaacTGTCAAG
ACATTCtaatatctttttgtttggTAAAGCAACCAATGTCAAATAAAAAG
TATCTTGACAAGGAATGAATAAGCTTTTCATATAGCCAAACAGAATtacc
atagcttttaccaaaaaaattatatcaaagattcaatttcagccattttc
agccaaatccaactttTGTTCTTGCTGGGGCTTCTTGAAAACTTATCCTG
TCCATGTGTAAACATTCCCGTATGTTTGTTATGTACTTGACTACCTGTTG
TCAAACCGAGATAAGACAGGGGTACtgcaataaaaagttatgcaagAAAA
CCCATGATTTCGACCTCAAAAGGTGACTTTCTttaccaataacttttgat
agaattgttCCCCTAATTTCCCCTTTTCAGTAGGTCTTCCTCTATCTTAT
AtgcttcagaaaaaccaaaaacattgcccTAAAAGCTTAGCCTCGCAAAG
TCCCAGCTAATAATATAACCCCCTGATTATATCTTTGTATTCTTATCCTA
TAAATATAACGGAACAGCCATTCTACGGAAATTGCTGTCACGTGACTTTT
TCCTACCGCGTGATACAAATCGCGCATTTTCATTGGATgttgaaaaatta
tttgttaTGTCACAAGAAGTTCCGACttcacatttttaaaaaacaaaatg
gcgaaaggacgtttttttatgattatTGAAAGAATTCAGTTGATCTTAAG
GTTTTAATTGCCATATGTACTAAAAGATTCTACAATGTTTGGGGAATTCA
AATATccaaaagtttttctatttttcattgaaaaatgacCTACAGGCAAT
TTATTTGCTtaaggtttgttttttcttcgtgaattttcattttcaatctt
tctttaaagatttaatattttatcaattatcTTGGGATTTTCAGGGTTTA
TTCTAGAACTATTTGGGAGTAGAGAGCTTTTTACAGATCTTAAAAAGGTT
TACTAATTCTTTAGATACAgtcaaaagtttagacatgtGTAAAACTTATT
TCTCTGATCGAACATTGACACACGCATTTCCAAATTAGACACGcgtggca
cgcgattgccatttcgacaaTGCCCGGATATTTGTCCATCTggaataaag
tccgtagcccctctgtttCGTGCACGGCCAAGTGGCGGAATACTACTACT
ACGCAATTCTGGATACAAGGATACAAGGAAAGTATGTAATCTGTTATCAG
AAATAATTTCCCCATTTACATtcccaatagaccttttttcaaagaggcca
ccctgttgaataattgaataattatgtagtccagcagaaaaaaaatgata
aaaccatgcataattattaaatatgcatgatacagtaattatgcatggct
ctatcattgtttttatagctgaactacataattattcaacagaacgtcct
ctttgaaaaaggtggcggagcagcacaaacttgtagaacaaaattggttt
attgaACTAATCGAGCCTAAACCCAttgatcaaacttaatcgaacactca
caatttttaaaaaatcttagagttccaatctttaatcgttcgatggagtt
cgattagtcgactgttcgattggttcgacaagttcgattgatcgggtccg
GGGTAGGGCatcaacagtcatttttggggcaaagtcaaaaaaattcaaga
tgtagtcttttttatgaaaatttaacctattgtaaAGCGTTCTGCACAAT
TTTTAAGGttagaagtccaaaattggccgaacccctcTGGGGgtaccgtg
agagtgggtaacttgcatcagtggaggctaatatgcatagcttcaaatga
atgacctgtctggtcattaaaatacaaagttaaatcaaaacaaaaatggt
agagtagaacTGTGAGCGGAGCTGAATATAGCTTATTTTAGTGACCAGCC
AGGCCATTCATTTCAGGGGtatgtatgttagcctccactgatggaAGTTT
TCTGGCCTGTAAATATGCCAAAACTAttacaaatcttatttttttcattt
gctgtactaaatttatgaagaaacaacaaaataatcatattgggttgaaa
attgtgcccattggagccttaaacgagccgttttaagccaattttgggta
agcaaaatgctttttaaggccaattttgcaagttcataaactttaaactg
attaaattacatgtctgaaatttttagaattaaaagtcttcaataaagtc
tttaagcaaaattaatttcaagttttttcacttttttcaaaaattcataa
tggcatcttcaaaaatcgctttttagcaagaaaatatcatatttatcaaa
aaaatagcattttttaaggcaacattctacaaactgagtttaatggtgac
tgaaattttttttgcagtaatAGTATTCtagagatactccagggaaatca
aaattatttgggtctgggatgggtgtatgtccgccattatggaaataaaa
tccttgctaagagccatttttcaggcaaaaacccaaatttggactgaaaa
aatctctaaaatgacaatagacaagggctcaaattttcttgcagtgatag
tattctagaaatactgcaggaaaattaAAGTCATATCTGggtttgggatt
tgggtatatccccctttttggaattgaaattcctgctaaatcgcaatatt
tcaagcaaaatcccatttttgactgaaaaaatcattaaaatggcaataaa
catgaacctaaaatctttttgcagtgatagccttttggaaatactccagg
gaaatcaaaatccttTAGGTTTAGGATAANAAACCTTTTTGCAGTGATAC
ATACATAGTcagtcttctggaaatactccagggaaatcaaaatcctttgg
ttctaggatttgggtatatccgcccTTATgggattgaaattcctgctaaa
actggctaaaatgcaacatttcgAGCAGAAACccaatttttgactaaaaa
cctCTCTAGAATGGCAATAGTTTTGGGctcaaaatctttttgcagtgata
ttgTGCTGTAAATACTCCAGGGGTAAAAACTATTAGGTATAAGATGTTTC
TGGGACAACAATTTTTGAATTGaagccagttttaaaatgtatataatatg
tGACTTCCCAAGCAATTTGAAGTACCTGAAAATCAGGCCGGTCTTGGTCC
GGTATTACGAGCGATCTAGTAGtggtcaaatttttgttttagatcgGCCT
GCAGACCTTCTAGAAATGTAATCTCTAACGGTCCTGGCCGCTTCTAGACG
CTCGTGGCCGCTCGTTAGACCAGTCCAGGCTGTTTGTTAGACCGGTCCAG
GCCTCTAGTTGGTAATTTTTAAGAACGataacatcaaaaaattcttcTTA
AAAGGATGCCGACCGGGCGATCGGGCCGGTCTAGGACCGGACGTTTCGCA
GCGGCAGCTCAATTAATTAGACACGTAATGgccttttggcaaatttttac
cGGTCATTTACCGGCCCTTAAAAGACCGTCTAAAGACCGGTCCCATTTTC
AGGCACTTTAAATCGCATATATCAAGCAAAAGagcaatctttttttgacg
gaaTAAGTTTTGAGAATGGAAATGTATGTTGGCTATAAAGAATTGTCGAG
TGGAATAGGATTTTTGCTATAATTTGTTTCAACTAGTATTTTTAAATTAA
AGGAttgtaaattcatattctttgtttaatgtttaaatatttagtcaatt
atgacgtattggatggaaatatgtagcattttaacagagatttcatttcc
ataatggtggatgtaaacaaatcccagtctcaaatgattttgttttccca
ggagaattcacagaatactatcacttcaaagaaatttaggtccatgtcta
ttgccatttcagagcagtttttagtcaaaaatggggtttttgcttgaaac
gttaCATTTTAGCCGGTTttagcacatatttcaattccataattgCGTAT
ATACCCTTATCCTAGACCCAaagaattttgatttccctggagtatttcca
gaaggctatcactgcaaaaagatttttggttcatgtttattgccattttt
aagattttacagTCAAAAATGGGACTTATGCCTGAAATATTGCgatttag
caggaatttcaattccacaatggtggatatacccaaatcccaaacccaga
tgattttgattttcctgcagtatttccagaatactatcactgcaagaaaa
ttcgggcccatgtctatcgtcattttagagatttttccagttcaaatttg
agtttttgcctgaaaaatagCTCTtggcagggattttatttccataatgg
cggacatagacccatcccagacccaaatgatttttatttccctggagtat
ctccagaatactatcactgcaaaaaaaatttcagtcaccatttaaactca
gtttgtagaatgttgccttaaaaaatgctaatttttgataaatatgatat
tTTCTTGCTAAAAAGCGAATTTTTGAAGACGCTATATgaatttttgagca
ttttgctacccaaaattggcttaaaacggctcgtttagggctccaatggg
cacaattttcaacccaatatgattattttgttgtttcttcataaagttta
gtacagcaaatgaaaaaaataagatttgccaTAGTTTTggcatatttaca
ggcctgaaaaggccagaactGTAGttcgaatcagtacccccaatTGTTTT
GGCCagttttggacttctgaccttaaaaaaaaTTGGGCAGAACGCCTCAC
AATgggttaaattttcaaaaaaaaacactacatcttgaatttgacatttg
acgccccaccctagTAGAGCtagagcagagctgcgtagttaaTTTGTTTT
GGATGGATGCAGCCAGACGTTACTAATCGATAAAATcgattatcgattaa
aatcgtTACCTAATCTATAATTATTCGATTGATTAAATATCGATTAGATT
AAAAACGATAATTGATAGATAATCGATACTCACAGTTTTTTAGGACTCAA
TTAAATTATCATCATAGATTTTCAATCGATAATATCGATTACAGTGTTAA
TAATTGATAATGTTGATTAATATCGGTATAATCGATACCTCGACCTTATC
GATTTTTAATAGATAATATCGATGAAACTTGGATTAATATCCTATAATAT
TATAGcctttttttgacatatttttaaattgacattttaggtttttgaac
ataacttttgaaccaatgaagtaaaattaaaaagtaatacaccaaatttc
aagttaggctttcctctgaatgattccggaacaatctttgaaaaatgtct
tttctactggtactgcctacaatatcaaatcaaataggtaacttatttgt
ggcacacccggtagcTACATAAGCTatattagcctgggaatccaagcgta
aaattttgttcacagtctagttcatgatatttttgctgcttgtttaacgc
ttggggcaggtaactcgcctgcagggagatttttccctgcaatgcaggct
tggcctgattggccagctttcggtgtattacttagcagtactttcacGCG
CATTTTGAtcatttcgatgcgcgcgcataatttatggaaaaagcagaaaa
aaggaaaacaaatgaaaatgaaaacagattaatttagaaacaaaatggct
gttgactggaagtctaaatacctgtggctgatgttttgatgtggttttta
gtagttttgaaagtctttagagcttgtgaaagagtttttatggtaagttg
attatgtgtgtacTTGCCTGGGTTTTCAAAGTTTAGACAAGtttcaacaa
gggttcacacacagactgtttataacattctgtgtcagactaatctacct
gcaccaagctccataatcttagaactttttgaggtgaggtattttttgtc
ttttctaagattatgagcttggattcccaggctaaagctatatggacatg
ttttttaattgtttcgtttttggcattttcaaaaaagctaaattttgatt
ggggtaacttggaggtccgaaattttcacaggatgttaGTAGGGATGATA
GGACCCCAAAAAGTTCTTTTCCCAAAATTCTAGCTGTTGTAGGGGCCAGT
TAGGAGCAAATTTTAGCATTTGTATGTGTTTCGCAAAATGATCTAAATCA
GAGCTAAAAACCCAGGAAGTTGTCTATCTGACCAATGATTCTCATAGAGG
GATGGCAATTAAAGCAGCCTATTGTTAAAAGGCCCACATTTTCTTATTGT
GGGGCCCTTTTTAGAGCACTTTTTTAGCACCTATTTCCCCATTGACAATA
AGTGCCAAAACACCATAGTAAAAGGCTTGATTGGATATAAGACTTCCATA
ACTTCTTTTGAAATAGTTGAATAATCAAGTTATTAACACCAATATAACAC
TTGAGCTGTTAATGGGCCTgtttggagctaaatttagcatttttccacta
aaaatacTGCAGCAGAATTACTAGTATGTTTCTAAACACCTAATTAAAAG
GCTGGAGTGGGTGTAAAACCTTCTTAACTTCCTTTGAAGTAATTTAATAA
TCAAGTTATTAACACCAATAAAACATTTGAGCTGTTAAAGGGCCCGTTTG
GAGCTTAATTTAGCATTTTCCACTGGAAATACTGCAATTTATTCTGCTTC
TCTTACTAAAATTAACTTTACACCTAGtctaatttttgctaaattcagcT
CATTTGAGACCTAGGAACATAAAATAACCTCATGAAGTTCTGTTCAATTG
TGTATCAAACATTAATGATAACTTATTTGATGTTCAAAACCTTTTCAGGG
TCCAGAATCGAgcaaatatttaacattttccgttaaaatgctaaaatact
gcTCGCTTTTGGTCCATTTAACTATGACAAAGATCACAGAAAAGTCTTTT
TAAGCTTCGTGAATGATCCAAGCATCAAATAGCGCCTAAATGAGCTATGA
AATAACAATAACCTTCGGGTTTTCAAATAATAGCATAAAGACATGGCCTT
CAAGAACTCTAAGTCCAGTCAATGCTAAATTTTTGCTCATAAAAGGACCC
TGGAATGCTTTATATCGGCCAAATTTGgtttttctaactttttgaATGCC
TCAAGTATGCATAATATCAATATCAtagttcttttgtgtttatcttaacT
GTGCTGGTGGATCAAAAAAAAGCCACACCCAATGCTAAAAACATGCTCAT
AATGGGACCATACAACCATTTTTAATGATTGCTTATGTTGGTATATTGAT
CTTATAAGGTATAAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATCACCAGGGCATAATTTtagttcattcattatat
tagaAATGAATGATGATTTCCCAAGACCCctaaaaacgaaacaattaaaa
aacatgtccatatATTCTTGATATGCCTAAATCATTTTTCTAgtggaaac
accctaaaaaagccgaGATTTGACCCCTCTCTGTTACTATAAATAGAAAC
AGAggtcaaaaacttttttgggtgcttcaaacttatttttcaaattcaaa
acctATGCCATTTGAAAGCCCTTAAATCATAAGAGAAAAAATGAGGGCTC
GTTTACCTGGCAAAAAGTTTTAGTTCGTGAGATATATCAATTTGAAGCTC
GAATTTTAGAGGTTGTAAAAAAGGCAATTATACAATattaaaatttaagt
tttgtAGTTAAGAGAACCCAAAACccaactttgtaggttttaaggggtat
gtggttttaaggggtatccattGGTAGAGgtaattttaaatttgaatgaT
TTCTGAATAAACTCCCACAAAGTCTTCAATACTGAGAAAATTGTCATGCT
CTTAGCATTGTAAGACATCACTCTCTTAGCATACTACGGCCTCTTAGTAC
ATTaaattggtctaatgttgacatccctcttctgaTTTGGACatctttct
ttaaagataggTCTTAGTATACTCTGTTGTCTTAGTATACTACGGTTAAA
CCCAATTGCACCCACACATACAAACCTTGGAAGGAAGAAATTTAAATCAT
ATACCATATAACATTGGTACTGGAGGAGAAAATTCTAGAAATGCAGGCAT
AGACTTAGAAGGTCTGGTCTAACATATGAGCCAAACttttccctttcttt
ttatttagtttGTCGTGAACAAAGAAAAAGCTGACAACATTATAACACAA
TACAGTGGCACCAATATTGATGGGTGTAGGATTAATATACAGGTATGAAT
ACTCTGGGGAAAGGCTTAACCTTCTTAAAttacatgttgttttttttata
agcaagtgtatgtcccttggtcaggctcgtgtatgcNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNccttttttaaacagataaaaatgaccacttgaaaaatattttag
gctgacatatatgctcatgttatgcttaggaattctgcaaatctgagcct
tcataatgcttataagcgttatgcttataaaaaaaaaacatgtatctatT
GGTAGACTTTTCTAAAGGTGCTATAATTTGTTCATTCTTTCGGCAAATTC
CTCAGCAAATCCCCATCCACAGTAATAGCCAAAAGAATTTCACTAACAGT
GAAGGTGTCACCACTTCAGAAGGTGATATGATTAGATaattcttttatca
aaatccTTAGCAAATCACATTAAAGAGCCAAAAGAATTTGACTTACAGTG
TcattttataacttttttttttaactaaagTCTCATTGCTTAGCAGGAAA
GGTCATTTgtaagtaaataaatgaaagcACTGACCATTTCTtttaaatcc
aaaattgaaatttttactgGTATATACCAGAATCTTTTGTTAAACATCTC
AGGGGAGGGAACCCAGTATTTCGGATTTAAAAGGGAGAAGATAGATTTCA
gggagggggggggctaaaGTTCTTTCTATTCAACCAAGACCATCATAATA
GATTCATATTTCTAGAAGagttcttttgttgtttttttattcagatttca
aagaACAAACAGAATCTACCAGATAGTGAAAACCTTTGCTTTGAGTGTGG
AAAACCCGGTCACTGGTAAGCTCTTACGTTTATTTTTATGTACATTTTGT
GTGATTTTTGTGCTGGTTTGTTCACTTTCTCCTTAGTTTTGTTTCTACTT
TTTCTCTAGCCTTATTTTAAACTAAATACTATTATTGTTTACTTCTTTGT
CTTTTTAGGGCTAAAGAATGCCAACTAAGAATGTAAGTTTATCTAGCTCG
TTGATTATGGTTATCCTCCACTCTCTACTCTTAGCTTccacttgttaatt
tttcgaaaattttccaacccccggaccttcttaggacccccccccgtcta
ttttaaattcttaagaatattttcagctgtcaaagagaaggccccttatt
ttgctctgaatagcctgattttagcctatatttaccttttttggggtttt
cagaagtacaacttccaacccccggcaattagtcccccctgtttatttgg
aacctaagagtaccctTGGTGATGTTCTATTACACCGAGAAGAGAACTTC
GGTTGTCTAAATTGGGTTTGTTACCCATTTCCTGTCATAAGTGTCATAAC
GATAGTTGGTTCAAAAAATGGTATAATCATTCAGTATCTTGAATGAACCA
GCTATTAAACTAATGCTTGAAACGAAAATATCAccaacagaacttttgat
tgcAATCTGAAaagatgaaaatatattttattgagcgatttctcttttat
tttattagtGATCGTTATGCACGCCTTGATAGACCTCCACCCAGAGGTGG
CTTTCGTGGTAGAGGCCGTGGGCGTGGGGATTATGGTGGCCGTGGTGGTT
ATGGTGGCCGAGGGGGTTATGGTGGCCGAGGTGACTATGGTCGTGATCGA
TATACATAAGTTGACGGAGACTATGGTGGCCGAGGGGGTTATGGTGGCCG
AGGTGACTATGGTCGTGATCGATATACATAAGTTGACGGAGACTATGGTG
GCCGAGGGGGTTATGGTGGCCGAGGTGACTATGGTCGTGATCGATATACA
TAAGTTGACGGAGACTATGGTGGCCGAGGTGACTATGGTGGCCGAGGAGA
CTATGGTGGCCGAGGTGGAGGAAGAGGAAGAGGTGACTACAGCCGTGACA
CCTACCAGAGGGATCCTTACGCCAGAGACCCGTATCTTCCGAGGGACCCT
TATGCAAGAGATCCATACCCGAGAGACCAACACAGAGATTCTTATGGAAG
GGACCCTTACTCAAAAAGTGGATACAGGGAACGCAGCCCGCCAAGAACAT
ATGATTATTCAAGGTATACCTCCCATCCCCATAAAAAACGTTAGGAAAAG
TTACACCTATGCAGAAACCATGAGATGGCTGCAAATATACCACTTTTTTA
TATATCTTTTTGAAGGGGGTACAAATACTACGCAGGGCTGAATAATAGTT
CAGTTGACTTGTATTATTCAATGTTAATACTATGAAACCATTGCCTGTAC
TGAGAGTATTATTCTTCCTTATAGAGCACCTGCATCTGACCCATATGCTG
CTGAAAGAAGACGTTTAGCTTACGGGGACTCCACCCCTTCTAGTAGCTCT
GCTCCGTATGCTACTCAAAGTAAACGGGCTGATCCTTATGCTAGTGGTCA
AAGCCAACGAAGTGACCCCTATGCCAGCCAGCGAAGTGACCCCTCTGCTA
GCCAGAGAGGTGATCCCTATGCTAGCCAAAGAAGTGATCCCTATGCTAGC
CAAAGAAGTGACCCCTATTCAAAGGAACGATCTGCTCCCTACGCCAGCCA
AACGACTGACCCTTATGCTACAAGCAGACCAGTACAAAGTCAGCAAGTTG
CTTCTGCGCCGTACGCCACACAAAGTNGGTGGTTATGGTGGCCGAGGAGA
CTATGGTGGCCGAGGTGACTATGGTGGCCGAGGAGACTATGGTGGCCGAG
GTGGAGGAAGAGGAAGAGGTGACTACGGCCGTGACACCTACCAGAGGGAT
CCTTACGCCAGAGACCCGTATCTTCCGAGGGACCCTTATGCAAGAGATCC
ATACCCGAGAGACCAACACAGAGATTCTTATGGAAGGGACCCTTACTCAA
AAAGTGGATACAGGGAACGCAGCCCGCCAAGAACATATGATTATTCAAGG
TATACCTCCCATCCCCATAAAAAACGTTAGGAAAAGTTACACCTATGCAG
AAACCATGAGATGGCTGCAAATATACCACTTTTTTATATATCTTTTTGAA
GGGGGTACAAATACTACGCAGGGCTGAATAATAGTTCAGTTGACTTGTAT
TATTCAATGTTAATACTATGAAACCATTGCCTGTACTGAGAGTATTATTC
TTCCTTATAGAGCACCTGCATCTGACCCATATGCTGCTGAAAGAAGACGT
TTAGCTTACGGGGACTCCACCCCTTCTAGTAGCTCCGCTCCGTATGCTAC
TCAAAGTAAACGGGCTGATCCTTATGCTAGTGGTCAAAGCCAACGAAGTG
ACCCCTATGCCAGCCAGCGAAGTGACCCCTCTGCTAGCCAGAGAGGTGAT
CCCTATGCTAGCCAAAGAAGTGATCCCTATGCTAGCCAAAGAAGTGACCC
CTATTCAAAGGAACGATCTGCTCCCTACGCCAGCCAAACGACTGACCCTT
ATGCTACAAGCAGACCAGTACAAAGTCAGCAAGTTGCTTCTGCGCCGTAC
GCCACACAAAGTCAAGCATCGACTGCAACTTACGCTACGCAAAGTTACGC
TGCCACTCCATCTTATGCTACACCTGCACGTACCGCATCCTATTCCTCTT
ATCCAGCTCAGACCCAATCAAGCTCCGCATATGCAACTCAAAGTTATGCA
AGCTCCTCATATGCCACTCAAAGTTATGCAAGCTCTTCATATGCAACTCA
AAGTTATGCAAGCTCTTATCCTGCTCAAAGTCAATCGAGTGCCGCGCCTT
ACGCCACTCAAAGCCAAAACGGTGGAGCTCGTTATGCAACTCAAAGTTAT
GCTCAATATGCAGCAGACTCACCGACAAAGAGTTTGCCTTATCAGCAATC
CACTAGTGTTTCTTCTGCTTCCTATGGCACCTCAGCTTCAGCATACAGTG
CACAACCTGCGGCTGCTACTCCTGGCTCTGCATCAGCTGGCTACAGTTAC
AGTTACCGCTAGATACCAGGTTTGATCCTTTCTAAATTGTTTTCACAACT
TTTTTTTATCGTCACAATTTTGTTGCTATACGTTTTATTTCTTCTACAGT
TTGAAGTTTTCGCTTTTTTGTTTTGTccgagaaaaagtgaaaattgttCC
ACTTTTTTAGTAGTTGAATGAGAATGGGATATCCAGAACctctaattcat
gatatgcaccactggagagtcttctgagaagttatttaaaattttccacc
caatacgtcacttaaacaatagaatttttgaaaattcttggaagcCTCTT
AAGTGGTGTATATCCATGAATTAAATGTACTTTTTCAATGAGAAAGGGAG
ATCGATTCACTGAGGTTTTCAATCGTTTCTTTAGGTCGAATGCGTGATTC
AAATCCAAGCTCTTACGAAGGAAAATCGAGTCGTGTCGAGTCGTGTCGTA
TGTCGTATGTCGGGTATTATCGGAAATTTATCGCGGAATATCAAGGCTTT
ACTTACGTTCGACgggaaaaagacaaaaaataacaacagATAGTACAAAT
AAATTAAGGACGACggactttcttttttatttcgaacTCGACGTATCGTT
TTATCGCTTTTTTTACTCGCGTATCACTTTTCGTGGTGCATATATGTGAT
TTATTACTGAAATACTTTTTACCTCTTATATGAAAATCATGTTCTAATTG
TTATGTGTCTACGTagatgtcccaaaaaaagcggaaatatttttataaaa
agtcgAAACTCATTATCTAAAATGAGCtaaataattgaaataagagTACA
ATTCTttgttcaatcaatagatattcaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012945XLOC_012945Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023035-exon-sc0000439-1491911889:116940..117190TCONS_00023035-exon-sc0000439-1491911889:116940..117190Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:116940..117190TCONS_00023035-exon-sc0000439-1510915933:116940..117190Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:116940..117190TCONS_00023035-exon-sc0000439-1575043694:116940..117190Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1491911889:130698..130781TCONS_00023035-exon-sc0000439-1491911889:130698..130781Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:130698..130781TCONS_00023035-exon-sc0000439-1510915933:130698..130781Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:130698..130781TCONS_00023035-exon-sc0000439-1575043694:130698..130781Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1491911889:132584..132654TCONS_00023035-exon-sc0000439-1491911889:132584..132654Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:132584..132654TCONS_00023035-exon-sc0000439-1510915933:132584..132654Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:132584..132654TCONS_00023035-exon-sc0000439-1575043694:132584..132654Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1491911889:132798..132821TCONS_00023035-exon-sc0000439-1491911889:132798..132821Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:132798..132821TCONS_00023035-exon-sc0000439-1510915933:132798..132821Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:132798..132821TCONS_00023035-exon-sc0000439-1575043694:132798..132821Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1491911889:133348..133469TCONS_00023035-exon-sc0000439-1491911889:133348..133469Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:133348..133469TCONS_00023035-exon-sc0000439-1510915933:133348..133469Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:133348..133469TCONS_00023035-exon-sc0000439-1575043694:133348..133469Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1491911889:134522..134738TCONS_00023035-exon-sc0000439-1491911889:134522..134738Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:134522..134738TCONS_00023035-exon-sc0000439-1510915933:134522..134738Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:134522..134738TCONS_00023035-exon-sc0000439-1575043694:134522..134738Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1491911889:134950..135758TCONS_00023035-exon-sc0000439-1491911889:134950..135758Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:134950..135758TCONS_00023035-exon-sc0000439-1510915933:134950..135758Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:134950..135758TCONS_00023035-exon-sc0000439-1575043694:134950..135758Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1491911889:136124..136568TCONS_00023035-exon-sc0000439-1491911889:136124..136568Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1510915933:136124..136568TCONS_00023035-exon-sc0000439-1510915933:136124..136568Clytia hemisphaericaexon
TCONS_00023035-exon-sc0000439-1575043694:136124..136568TCONS_00023035-exon-sc0000439-1575043694:136124..136568Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000439supercontigsc0000439:116940..136568 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	7.02204e-08	6.26899e-09	1.83835e-07	0	0	0.269078	0	9.90659e-09	0	0	0	0	0	0	0	0	0	0	0	1.27423e-06	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023035 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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