TCONS_00022593 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022593
Unique NameTCONS_00022593
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022593 ID=TCONS_00022593|Name=TCONS_00022593|organism=Clytia hemisphaerica|type=transcript|length=136bp
TGTTGAATTTTCGTGCAATGGCTTAGATCtaGTACAATTTATCGCTTGCA
AACCGAATACTGATTTTCAAAGCAGACGTTATGATTACGGGTTGGGAAAT
GACATACACAGCAAAATAGAATTCCTGTTGTTGGCT
Run BLAST on NCBI

transcript from alignment at sc0000428:272645..273293+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022593 ID=TCONS_00022593|Name=TCONS_00022593|organism=Clytia hemisphaerica|type=transcript|length=649bp|location=Sequence derived from alignment at sc0000428:272645..273293+ (Clytia hemisphaerica)
TGTTGAATTTTCGTGCAATGGCTTAGATCtagtaagttttatttttaaaa
atggatGAACATTTTGTACAGCAACCTTTTcaataggctacgtcatatct
tccttcgtttcgagcgtaaaactcctactcttcgggctatgagcactgat
cttgttttgaatattgaaattctccagataaatcgcatgcgcactgaggt
tttaatgaaacaatagagagtttcgaaacctaagccaatcagctgtgttt
taaacattcttttatttaaaatctctattgataaacaacTTTTGTGAATg
ctgtctattatgtttaaacctattattAAGCAATTCctggtgggggtcac
tagtgcccgcctatagcagtgcctatagaccaagagtaaggcctaaaagc
ctggatctgtctattgtatAGACTACCTTTTCAACtgactttttcacaaa
acctttaaattgtTAAGCAATGTTTTGtccaatttcatttttaagttgtc
aatttttcatatgattataataattttcaaccctttttttTCAGGTACAA
TTTATCGCTTGCAAACCGAATACTGATTTTCAAAGCAGACGTTATGATTA
CGGGTTGGGAAATGACATACACAGCAAAATAGAATTCCTGTTGTTGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012679XLOC_012679Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022593-exon-sc0000428-1491911889:272645..272675TCONS_00022593-exon-sc0000428-1491911889:272645..272675Clytia hemisphaericaexon
TCONS_00022593-exon-sc0000428-1510915933:272645..272675TCONS_00022593-exon-sc0000428-1510915933:272645..272675Clytia hemisphaericaexon
TCONS_00022593-exon-sc0000428-1575043694:272645..272675TCONS_00022593-exon-sc0000428-1575043694:272645..272675Clytia hemisphaericaexon
TCONS_00022593-exon-sc0000428-1491911889:273189..273293TCONS_00022593-exon-sc0000428-1491911889:273189..273293Clytia hemisphaericaexon
TCONS_00022593-exon-sc0000428-1510915933:273189..273293TCONS_00022593-exon-sc0000428-1510915933:273189..273293Clytia hemisphaericaexon
TCONS_00022593-exon-sc0000428-1575043694:273189..273293TCONS_00022593-exon-sc0000428-1575043694:273189..273293Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000428supercontigsc0000428:272645..273293 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022593 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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