TCONS_00022105 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022105
Unique NameTCONS_00022105
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3341

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022105 ID=TCONS_00022105|Name=TCONS_00022105|organism=Clytia hemisphaerica|type=transcript|length=3341bp
CTTCACCGAAAATCTTTGTATTTTGCACAAAAAATTTATCGGATTctaaa
tattaaaatcaaaatttatgatcaaaaatcaatcaaatgATGACGTAACA
CTATGGAAATAGCTGAGTCAGCATGgctttttggaaatatttttgcttgt
tCCTTTATGTATTTGCATTGGCCTATTGCGCTGATATAAAGAAACATCAT
AATGTTCATCACGAAGACTACACACACCGACAAACAGTACGCCGACAACA
AGTTATACACCCGATAAACGAAAACGAATCATCATCGGTTAAAAATGACA
ACGACAATGATGAAGATATCGAATCTCTTGGAAAACGAATTGATGCAACC
GGCGCCGAAATCTCAAAACCGAAACACGAGAATTCGAAAGAAACAGTAGT
GGCTACAAAAGCAATTATAgctaaaattaaagaaatacaGGATAAGATTT
TTAAGCGTACCAATGGTAATAAGAACTTAGAAGCTGAGCTACAACTCATG
TCGCCCATCCCGGCGCAGAAAAATGTTGAGTCATCACCTCTCGTTAAAAA
GAAGCCCGTGGACGTAAGCGGAGACCGGCGTAAGATTATCCCCGAAGACG
TAGTCGATAAAATCTTGGAGAAATTTCAACAGTTAAGAACGGAGGCGAAA
CATATTGCGATCGCATCTGCTGATGATCCGAACAAAAAACATGAAGGCGC
TGCACCGTCGCCCAATGTGATACCAGATGAGCTCACAGAAAATAACTCCC
CTGGAAATCCATATGCCAGTATCGGCCCTCCAAAAGAGAGTGAAGAAATA
GCTAACCGAACTAGTAATGCTGATGTCAAAAGTGTAGGTCTCGAACCTCA
AAGTCCAAGCACCAGTCTCCCAGATGCTGTCTCCAACACTGCTGGTCAAA
TACAAATACCTATTGGAAATACAGCCTCTGCCGGCAACTCTCCTTCAATT
CCAAACGTCGATGGAAAATCACCTAAAGGCATTCCAATAATGTTTATTAA
AAATGGACCAAATTTAATCCCGGTATATAATAATGGAGAAAATGGTGGAG
CTTTGAATTCACCTATTTCGGCAACTGGTCAAGCAGCTGTTCAATTTAAT
AATAATCCTTTACCAGAGCCAAATTTGCCAACGAATGTAGTTCCAATGAT
GAATGAGTTCAATGGTGGAGAGCGAGGTGAGAATCCAGAATCAAGATGCG
ATATCCCTGGGTCCTGCCCAAACCCTGGCGAAGGAGGTTCAAATGATTTG
GAACAACATATATCACCAGAACGTGTTTCAGACACGCAAATGACTGGTGA
TTTAATTGATAAATTGATTCATTCACCAGGCTTCCCACAACTGgcatcaa
aattaatttcagaaGGTAAAATCAATTATCCTGAACAAGGTGGTGGTGAA
CGAATGATGGATGGGATGGGAGATTCAAGAAATGTTGTCCCTATGACGGA
CTCGAATGTAGAAGGTATGGATCATTCTAAAGTTAACTTTGACATGAAAG
GTAATTATGCATCAGCAAATCTACCAGAGCCATCAATGGCCCGTGAGGAA
CAACAAAGACGTGAAGAAGAGGAACGACATCACCAAGATGtcgaaaattt
ctttgaacATCAACCTgcatcaaaatctgatgtttcTTCTAACATGTATA
ACAGCCGTACCGAGGGGCGATCAACTCATGGTTTAGATGGTCGATACGTG
AATGATATTTCAGATCCAATGGAGGACGTCGAATCGAAATTCGGTTCAAA
ATCAGCTGATGAATTGTTAGATTTCGCTAAATACAGGAGTATGAGCGCTC
CTGATCTACACGCATCTCCAAACAGCCAGATAGGAATGCAACCTGATGAA
AATGCAATGGTTGCCGCCCACTCACCTCAACAACGAGTGATGAATCCGTT
CCAACAAGAAGGAGCGTCCTCTCAAACCGAGGATGCTGGGCAAACAATCG
CGAGCCGGTTTATGAATGAGGATCCATCAACTTTGCTTGATGACCTCCAT
AAAACGCAAATGCAGCAGGGACTGACTGGGCCAGGTGATTCAGCCGTCAG
TATAGGAGCAAGAGGTGGTATCGGTCTAGCTCCTGACCAGCAGCAGCAGG
CTGAAGGTGAGGGTCGGCATCGGATTCCAGAGCCAGCACCTGATGACCTC
TTACAACAAGTCCGTAATTTCAACCATCGAATGGATGTAGAGCAACTACA
ACATCGTCAACGAATCGAGGCAGAAAAGAAAAATCTGAATCGTGATTTCG
GATATATGGATCCAAGTGTGGCAGATGAAATACGTGGCAACAACGGATTA
TCACAAAAATTCGACGTAGAACGTAAAGATCTAGCTACGGAAAACGACAT
GCAGCTACTACGAAGTCGTTCCCCGTCTGAACCGCGCCGTCACGGTCAAA
TTTCGGTCATGTCGGGAGATACGGTGCAGTTTAATAGTGGACGTTTATCG
ATGGATACTAATGATGTTTTATCATCATACAGAGATGGCGCTTTTTCGAG
GAATAAAATAGGCCGCCCTCGTAGACGCCACAAGCGTCATCATAAGAGAC
GTTTTTTACACCCGTTCACACGTGGAATCATTGAACACCCTATGTCATTA
AATGATAATGATGTTGAACTTAGAGTGAATGGTCAAACACTGACAGACAA
TACACAATTGCGTAGCACGATTGTTGATGGGAAAGTCAGGCCAGGGAAAG
GTAAAACTTTCACTTCAAAAGATCCAATACAAATCGAACTTTCACACGAT
GATCAAAAACGAAAGATCGTTAATATCGTTACTAATGGGAAATATCGAGT
GATGAACGATAAAAAACGATATCAGATACCCCATAAATCAAATTAATTAT
GATCCTAGATTttaattttagcttttttgtaGCATTAGTTGTTAAATTTG
ACTTCTCTCTAAAATAGCGTCTTTAGCAAGAGGAAATTGGTTCCTTTTTT
CCAACCTTTGGGAACTTCCTGTCATCGTTGGCTGCAAAATGACGCGACGA
AAACTTgtcattttttgtgttttcgTGAAACAAAGGTTAAAGAGGAATAT
CCaaaatggctgcgtttagaccaactggcatttgtaatttggcatttgct
catgagggattcgattttaatagcttttccattgtattttctctcatggc
atttaaggaatcgtctttttagagtcattacggagtcattactgaaaagg
tgattccctcaagttcaagtttgacagatcaaacaatgaaaaagcatgga
atttctcaaaaactgcagtcattaagactgaaactttttgccgtagggct
aggctatggcaaatcttgcaaattttacaatctatagaaag
Run BLAST on NCBI

protein sequence of TCONS_00022105-protein

>TCONS_00022105-protein ID=TCONS_00022105-protein|Name=TCONS_00022105-protein|organism=Clytia hemisphaerica|type=polypeptide|length=907bp
MAFWKYFCLFLYVFALAYCADIKKHHNVHHEDYTHRQTVRRQQVIHPINE
NESSSVKNDNDNDEDIESLGKRIDATGAEISKPKHENSKETVVATKAIIA
KIKEIQDKIFKRTNGNKNLEAELQLMSPIPAQKNVESSPLVKKKPVDVSG
DRRKIIPEDVVDKILEKFQQLRTEAKHIAIASADDPNKKHEGAAPSPNVI
PDELTENNSPGNPYASIGPPKESEEIANRTSNADVKSVGLEPQSPSTSLP
DAVSNTAGQIQIPIGNTASAGNSPSIPNVDGKSPKGIPIMFIKNGPNLIP
VYNNGENGGALNSPISATGQAAVQFNNNPLPEPNLPTNVVPMMNEFNGGE
RGENPESRCDIPGSCPNPGEGGSNDLEQHISPERVSDTQMTGDLIDKLIH
SPGFPQLASKLISEGKINYPEQGGGERMMDGMGDSRNVVPMTDSNVEGMD
HSKVNFDMKGNYASANLPEPSMAREEQQRREEEERHHQDVENFFEHQPAS
KSDVSSNMYNSRTEGRSTHGLDGRYVNDISDPMEDVESKFGSKSADELLD
FAKYRSMSAPDLHASPNSQIGMQPDENAMVAAHSPQQRVMNPFQQEGASS
QTEDAGQTIASRFMNEDPSTLLDDLHKTQMQQGLTGPGDSAVSIGARGGI
GLAPDQQQQAEGEGRHRIPEPAPDDLLQQVRNFNHRMDVEQLQHRQRIEA
EKKNLNRDFGYMDPSVADEIRGNNGLSQKFDVERKDLATENDMQLLRSRS
PSEPRRHGQISVMSGDTVQFNSGRLSMDTNDVLSSYRDGAFSRNKIGRPR
RRHKRHHKRRFLHPFTRGIIEHPMSLNDNDVELRVNGQTLTDNTQLRSTI
VDGKVRPGKGKTFTSKDPIQIELSHDDQKRKIVNIVTNGKYRVMNDKKRY
QIPHKSN
Run BLAST on NCBI

transcript from alignment at sc0000405:266573..271809+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022105 ID=TCONS_00022105|Name=TCONS_00022105|organism=Clytia hemisphaerica|type=transcript|length=5237bp|location=Sequence derived from alignment at sc0000405:266573..271809+ (Clytia hemisphaerica)
CTTCACCGAAAATCTTTGTATTTTGCACAAAAAATTTATCGGATTctaaa tattaaaatcaaaatttatgatcaaaaatcaatcaaatgATGACGTAACA CTATGGAAATAGCTGAGTCAGCATGgctttttggaaatatttttgcttgt tCCTTTATGTATTTGCATTGGCCTATTGCGCTGATATAAGTGAGTGTTTT GCAGAATTTTATTTTGGTGCACATTTTTCGAAGCCCTAGGATGtttataa ctttttgaattccaagcctataaatgttcttaaaatgtactaatttcacc aatttatttgtattttgtgttgtttttcctaagaaattgggtgtttagGG TCcgtaaagtcttaaaatgtcCGTAACTTGTTCTTTTgatcatcgaagcc ttatatttttatctatttttatcTCATAAAAATACGTGTATTCTGGACCG GGAGCTAAAAACCTGAGGTAAAAAGTCTGTTTTTGTGGTTTTGAATCATA GTGCGAATCAAGATCGTTTCTTTCTTATAACTGGATTGTGGTTCGGGGTC AGATTGGAtttcttttccaatttttcgaatacacgtttttttataaggaa ccttaacttggctccgggcctggagttccttatttttcgagagaatttca gcctcaaagtttcTTATCCAGTTTCCTTATTTACTAAGCTGCTAAGATTG GATTTGCTAAGTATGTGACTTATGTATAAGTATAACAATGGACTAAAATG CAAAAAGAGACGTTTATTGAACGTTGTTTCGTCAACATTGTGTTATCTTT GTAAATGTGTGCAAATTCAAGTTTAACTCTCTGTGACTTGACTTGTTTTG TTATTCTCAgtctgagcagttccttaacaattcctagtttttcggaccat tttgagcctcaaattccttataaacgtgttccttataaaaaacgtgtacc gaAAAACACCTAAAGTAAACTTTTTAATTAAATAAAGTCAGCAATTTATT ATTTGCTGTGTAAACCAATTTTTCACACATTTTGGTCGAGTTAAGGAAGT TTCGAGtcagggagtggtcagaaagtatctactagggggtggaggattct aGGCGGGTTTATTTACTTGAATACATTTAAAATATCCACACCCTTTATAG AGTAAGGTtgataaggcattgttaactgaagggacaagaaaacttgttcg agttcaGATATGAGACATTCCAGTTATAAGGGTTCGAGTTAAAGTCTCCA CTGTATCTATAATATATTTGCACCTGTGACCGAACGAGAATTCTCTTCAT ATTCTTCAGAGAAACATCATAATGTTCATCACGAAGACTACACACACCGA CAAACAGTACGCCGACAACAAGTTATACACCCGATAAACGAAAACGAATC ATCATCGGTTAAAAATGACAACGACAATGATGAAGATATCGAATCTCTTG GAAAACGAATTGATGCAACCGGCGCCGAAATCTCAAAACCGAAACACGAG AATTCGAAAGAAACAGTAGTGGCTACAAAAGCAATTATAgctaaaattaa agaaatacaGGATAAGATTTTTAAGCGTACCAATGGTAATAAGAACTTAG AAGCTGAGCTACAACTCATGTCGCCCATCCCGGCGCAGAAAAATGTTGAG TCATCACCTCTCGTTAAAAAGAAGCCCGTGGACGTAAGCGGAGACCGGCG TAAGATTATCCCCGAAGACGTAGTCGATAAAATCTTGGAGAAATTTCAAC AGTTAAGAACGGAGGCGAAACATATTGCGATCGCATCTGCTGATGATCCG AACAAAAAACATGAAGGCGCTGCACCGTCGCGTAAGTTACCTCATTTTAT AGTTTGATCAGTCATTCTAATTCGGCCATgctattttatatccatacagg gggtggacaaacatttccagggggtaatctgAGAATAACTACTACGGCGT CTGAGGAAGGTTTCCATGGTTTAAAGGCCTTTTATTTGAATAGTTATTCT AAAACTTTCAATGGGTAAAAGACTGCAGTCAGTCTTAGAGTCAGTCCTTC AGGTTTTAGTTCGTTCACTCTCACTAtaagaaatgaaaaagtttgttttt atatgtAGCCAATTTCCAGGGAGCAATCACATATTTTCAACATTCTTTTT TCCTTGAAAAGGTCTGTCCAAtcccaccccctgtatggatactAAATTGA ATAACCCATTATATATTTACAACACAGTAATTTTTGGTCTcgtttacaaa ttttgatttgTGAGAGAtgctaaattttcaaattggAAATCATTAGTTAA GTGAAGTAAAAATTGACCAACGCCGCATAGGAAAAGGTGAAGGGGACTTA TATTTAAAAATACTGGATATTGTTGGCTTCGatcgaacaaaaaaaattcc tcaaaaaaaattcctctGCTCTGTTAAGATAATGAGTGTCGAGGACCCCA CTATGTTCAACCTTTTCCGAGCACactatatatttttattacatttacCT ATTTTGTTTTATTCTATAGCAAATGTGATACCAGANCACTATGTTCAACC TTTTCCGAGCACactatatatttttattacatttacCTATTTTGTTTTAT TCTATAGCCAATGTGATACCAGATGAGCTCACAGAAAATAACTCCCCTGG AAATCCATATGCCAGTATCGGCCCTCCAAAAGAGAGTGAAGAAATAGCTA ACCGAACTAGTAATGCTGATGTCAAAAGTGTAGGTCTCGAACCTCAAAGT CCAAGCACCAGTCTCCCAGATGCTGTCTCCAACACTGCTGGTCAAATACA AATACCTATTGGAAATACAGCCTCTGCCGGCAACTCTCCTTCAATTCCAA ACGTCGATGGAAAATCACCTAAAGGCATTCCAATAATGTTTATTAAAAAT GGACCAAATTTAATCCCGGTATATAATAATGGAGAAAATGGTGGAGCTTT GAATTCACCTATTTCGGCAACTGGTCAAGCAGCTGTTCAATTTAATAATA ATCCTTTACCAGAGCCAAATTTGCCAACGAATGTAGTTCCAATGATGAAT GAGTTCAATGGTGGAGAGCGAGGTGAGAATCCAGAATCAAGATGCGATAT CCCTGGGTCCTGCCCAAACCCTGGCGAAGGAGGTTCAAATGATTTGGAAC AACATATATCACCAGAACGTGTTTCAGACACGCAAATGACTGGTGATTTA ATTGATAAATTGATTCATTCACCAGGCTTCCCACAACTGgcatcaaaatt aatttcagaaGGTAAAATCAATTATCCTGAACAAGGTGGTGGTGAACGAA TGATGGATGGGATGGGAGATTCAAGAAATGTTGTCCCTATGACGGACTCG AATGTAGAAGGTATGGATCATTCTAAAGTTAACTTTGACATGAAAGGTAA TTATGCATCAGCAAATCTACCAGAGCCATCAATGGCCCGTGAGGAACAAC AAAGACGTGAAGAAGAGGAACGACATCACCAAGATGtcgaaaatttcttt gaacATCAACCTgcatcaaaatctgatgtttcTTCTAACATGTATAACAG CCGTACCGAGGGGCGATCAACTCATGGTTTAGATGGTCGATACGTGAATG ATATTTCAGATCCAATGGAGGACGTCGAATCGAAATTCGGTTCAAAATCA GCTGATGAATTGTTAGATTTCGCTAAATACAGGAGTATGAGCGCTCCTGA TCTACACGCATCTCCAAACAGCCAGATAGGAATGCAACCTGATGAAAATG CAATGGTTGCCGCCCACTCACCTCAACAACGAGTGATGAATCCGTTCCAA CAAGAAGGAGCGTCCTCTCAAACCGAGGATGCTGGGCAAACAATCGCGAG CCGGTTTATGAATGAGGATCCATCAACTTTGCTTGATGACCTCCATAAAA CGCAAATGCAGCAGGGACTGACTGGGCCAGGTGATTCAGCCGTCAGTATA GGAGCAAGAGGTGGTATCGGTCTAGCTCCTGACCAGCAGCAGCAGGCTGA AGGTGAGGGTCGGCATCGGATTCCAGAGCCAGCACCTGATGACCTCTTAC AACAAGTCCGTAATTTCAACCATCGAATGGATGTAGAGCAACTACAACAT CGTCAACGAATCGAGGCAGAAAAGAAAAATCTGAATCGTGATTTCGGATA TATGGATCCAAGTGTGGCAGATGAAATACGTGGCAACAACGGATTATCAC AAAAATTCGACGTAGAACGTAAAGATCTAGCTACGGAAAACGACATGCAG CTACTACGAAGTCGTTCCCCGTCTGAACCGCGCCGTCACGGTCAAATTTC GGTCATGTCGGGAGATACGGTGCAGTTTAATAGTGGACGTTTATCGATGG ATACTAATGATGTTTTATCATCATACAGAGATGGCGCTTTTTCGAGGAAT AAAATAGGCCGCCCTCGTAGACGCCACAAGCGTCATCATAAGAGACGTTT TTTACACCCGTTCACACGTGGAATCATTGAACACCCTATGTCATTAAATG ATAATGATGTTGAACTTAGAGTGAATGGTCAAACACTGACAGACAATACA CAATTGCGTAGCACGATTGTTGATGGGAAAGTCAGGCCAGGGAAAGGTAA AACTTTCACTTCAAAAGATCCAATACAAATCGAACTTTCACACGATGATC AAAAACGAAAGATCGTTAATATCGTTACTAATGGGAAATATCGAGTGATG AACGATAAAAAACGATATCAGATACCCCATAAATCAAATTAATTATGATC CTAGATTttaattttagcttttttgtaGCATTAGTTGTTAAATTTGACTT CTCTCTAAAATAGCGTCTTTAGCAAGAGGAAATTGGTTCCTTTTTTCCAA CCTTTGGGAACTTCCTGTCATCGTTGGCTGCAAAATGACGCGACGAAAAC TTgtcattttttgtgttttcgTGAAACAAAGGTTAAAGAGGAATATCCaa aatggctgcgtttagaccaactggcatttgtaatttggcatttgctcatg agggattcgattttaatagcttttccattgtattttctctcatggcattt aaggaatcgtctttttagagtcattacggagtcattactgaaaaggtgat tccctcaagttcaagtttgacagatcaaacaatgaaaaagcatggaattt ctcaaaaactgcagtcattaagactgaaactttttgccgtagggctaggc tatggcaaatcttgcaaattttacaatctatagaaag

Coding sequence (CDS) from alignment at sc0000405:266573..271809+

>TCONS_00022105 ID=TCONS_00022105|Name=TCONS_00022105|organism=Clytia hemisphaerica|type=CDS|length=8172bp|location=Sequence derived from alignment at sc0000405:266573..271809+ (Clytia hemisphaerica)
ATGgctttttggaaatatttttgcttgttCCTTTATGTATTTGCATTGGC
CTATTGCGCTGATATAAAGAAACATCATAATGTTCATCACGAAGACTACA
CACACCGACAAACAGTACGCCGACAACAAGTTATACACCCGATAAACGAA
AACGAATCATCATCGGTTAAAAATGACAACGACAATGATGAAGATATCGA
ATCTCTTGGAAAACGAATTGATGCAACCGGCGCCGAAATCTCAAAACCGA
AACACGAGAATTCGAAAGAAACAGTAGTGGCTACAAAAGCAATTATAgct
aaaattaaagaaatacaGGATAAGATTTTTAAGCGTACCAATGGTAATAA
GAACTTAGAAGCTGAGCTACAACTCATGTCGCCCATCCCGGCGCAGAAAA
ATGTTGAGTCATCACCTCTCGTTAAAAAGAAGCCCGTGGACGTAAGCGGA
GACCGGCGTAAGATTATCCCCGAAGACGTAGTCGATAAAATCTTGGAGAA
ATTTCAACAGTTAAGAACGGAGGCGAAACATATTGCGATCGCATCTGCTG
ATGATCCGAACAAAAAACATGAAGGCGCTGCACCGTCGCCCAATGTGATA
CCAGATGAGCTCACAGAAAATAACTCCCCTGGAAATCCATATGCCAGTAT
CGGCCCTCCAAAAGAGAGTGAAGAAATAGCTAACCGAACTAGTAATGCTG
ATGTCAAAAGTGTAGGTCTCGAACCTCAAAGTCCAAGCACCAGTCTCCCA
GATGCTGTCTCCAACACTGCTGGTCAAATACAAATACCTATTGGAAATAC
AGCCTCTGCCGGCAACTCTCCTTCAATTCCAAACGTCGATGGAAAATCAC
CTAAAGGCATTCCAATAATGTTTATTAAAAATGGACCAAATTTAATCCCG
GTATATAATAATGGAGAAAATGGTGGAGCTTTGAATTCACCTATTTCGGC
AACTGGTCAAGCAGCTGTTCAATTTAATAATAATCCTTTACCAGAGCCAA
ATTTGCCAACGAATGTAGTTCCAATGATGAATGAGTTCAATGGTGGAGAG
CGAGGTGAGAATCCAGAATCAAGATGCGATATCCCTGGGTCCTGCCCAAA
CCCTGGCGAAGGAGGTTCAAATGATTTGGAACAACATATATCACCAGAAC
GTGTTTCAGACACGCAAATGACTGGTGATTTAATTGATAAATTGATTCAT
TCACCAGGCTTCCCACAACTGgcatcaaaattaatttcagaaGGTAAAAT
CAATTATCCTGAACAAGGTGGTGGTGAACGAATGATGGATGGGATGGGAG
ATTCAAGAAATGTTGTCCCTATGACGGACTCGAATGTAGAAGGTATGGAT
CATTCTAAAGTTAACTTTGACATGAAAGGTAATTATGCATCAGCAAATCT
ACCAGAGCCATCAATGGCCCGTGAGGAACAACAAAGACGTGAAGAAGAGG
AACGACATCACCAAGATGtcgaaaatttctttgaacATCAACCTgcatca
aaatctgatgtttcTTCTAACATGTATAACAGCCGTACCGAGGGGCGATC
AACTCATGGTTTAGATGGTCGATACGTGAATGATATTTCAGATCCAATGG
AGGACGTCGAATCGAAATTCGGTTCAAAATCAGCTGATGAATTGTTAGAT
TTCGCTAAATACAGGAGTATGAGCGCTCCTGATCTACACGCATCTCCAAA
CAGCCAGATAGGAATGCAACCTGATGAAAATGCAATGGTTGCCGCCCACT
CACCTCAACAACGAGTGATGAATCCGTTCCAACAAGAAGGAGCGTCCTCT
CAAACCGAGGATGCTGGGCAAACAATCGCGAGCCGGTTTATGAATGAGGA
TCCATCAACTTTGCTTGATGACCTCCATAAAACGCAAATGCAGCAGGGAC
TGACTGGGCCAGGTGATTCAGCCGTCAGTATAGGAGCAAGAGGTGGTATC
GGTCTAGCTCCTGACCAGCAGCAGCAGGCTGAAGGTGAGGGTCGGCATCG
GATTCCAGAGCCAGCACCTGATGACCTCTTACAACAAGTCCGTAATTTCA
ACCATCGAATGGATGTAGAGCAACTACAACATCGTCAACGAATCGAGGCA
GAAAAGAAAAATCTGAATCGTGATTTCGGATATATGGATCCAAGTGTGGC
AGATGAAATACGTGGCAACAACGGATTATCACAAAAATTCGACGTAGAAC
GTAAAGATCTAGCTACGGAAAACGACATGCAGCTACTACGAAGTCGTTCC
CCGTCTGAACCGCGCCGTCACGGTCAAATTTCGGTCATGTCGGGAGATAC
GGTGCAGTTTAATAGTGGACGTTTATCGATGGATACTAATGATGTTTTAT
CATCATACAGAGATGGCGCTTTTTCGAGGAATAAAATAGGCCGCCCTCGT
AGACGCCACAAGCGTCATCATAAGAGACGTTTTTTACACCCGTTCACACG
TGGAATCATTGAACACCCTATGTCATTAAATGATAATGATGTTGAACTTA
GAGTGAATGGTCAAACACTGACAGACAATACACAATTGCGTAGCACGATT
GTTGATGGGAAAGTCAGGCCAGGGAAAGGTAAAACTTTCACTTCAAAAGA
TCCAATACAAATCGAACTTTCACACGATGATCAAAAACGAAAGATCGTTA
ATATCGTTACTAATGGGAAATATCGAGTGATGAACGATAAAAAACGATAT
CAGATACCCCATAAATCAAATTAAATGgctttttggaaatatttttgctt
gttCCTTTATGTATTTGCATTGGCCTATTGCGCTGATATAAAGAAACATC
ATAATGTTCATCACGAAGACTACACACACCGACAAACAGTACGCCGACAA
CAAGTTATACACCCGATAAACGAAAACGAATCATCATCGGTTAAAAATGA
CAACGACAATGATGAAGATATCGAATCTCTTGGAAAACGAATTGATGCAA
CCGGCGCCGAAATCTCAAAACCGAAACACGAGAATTCGAAAGAAACAGTA
GTGGCTACAAAAGCAATTATAgctaaaattaaagaaatacaGGATAAGAT
TTTTAAGCGTACCAATGGTAATAAGAACTTAGAAGCTGAGCTACAACTCA
TGTCGCCCATCCCGGCGCAGAAAAATGTTGAGTCATCACCTCTCGTTAAA
AAGAAGCCCGTGGACGTAAGCGGAGACCGGCGTAAGATTATCCCCGAAGA
CGTAGTCGATAAAATCTTGGAGAAATTTCAACAGTTAAGAACGGAGGCGA
AACATATTGCGATCGCATCTGCTGATGATCCGAACAAAAAACATGAAGGC
GCTGCACCGTCGCCCAATGTGATACCAGATGAGCTCACAGAAAATAACTC
CCCTGGAAATCCATATGCCAGTATCGGCCCTCCAAAAGAGAGTGAAGAAA
TAGCTAACCGAACTAGTAATGCTGATGTCAAAAGTGTAGGTCTCGAACCT
CAAAGTCCAAGCACCAGTCTCCCAGATGCTGTCTCCAACACTGCTGGTCA
AATACAAATACCTATTGGAAATACAGCCTCTGCCGGCAACTCTCCTTCAA
TTCCAAACGTCGATGGAAAATCACCTAAAGGCATTCCAATAATGTTTATT
AAAAATGGACCAAATTTAATCCCGGTATATAATAATGGAGAAAATGGTGG
AGCTTTGAATTCACCTATTTCGGCAACTGGTCAAGCAGCTGTTCAATTTA
ATAATAATCCTTTACCAGAGCCAAATTTGCCAACGAATGTAGTTCCAATG
ATGAATGAGTTCAATGGTGGAGAGCGAGGTGAGAATCCAGAATCAAGATG
CGATATCCCTGGGTCCTGCCCAAACCCTGGCGAAGGAGGTTCAAATGATT
TGGAACAACATATATCACCAGAACGTGTTTCAGACACGCAAATGACTGGT
GATTTAATTGATAAATTGATTCATTCACCAGGCTTCCCACAACTGgcatc
aaaattaatttcagaaGGTAAAATCAATTATCCTGAACAAGGTGGTGGTG
AACGAATGATGGATGGGATGGGAGATTCAAGAAATGTTGTCCCTATGACG
GACTCGAATGTAGAAGGTATGGATCATTCTAAAGTTAACTTTGACATGAA
AGGTAATTATGCATCAGCAAATCTACCAGAGCCATCAATGGCCCGTGAGG
AACAACAAAGACGTGAAGAAGAGGAACGACATCACCAAGATGtcgaaaat
ttctttgaacATCAACCTgcatcaaaatctgatgtttcTTCTAACATGTA
TAACAGCCGTACCGAGGGGCGATCAACTCATGGTTTAGATGGTCGATACG
TGAATGATATTTCAGATCCAATGGAGGACGTCGAATCGAAATTCGGTTCA
AAATCAGCTGATGAATTGTTAGATTTCGCTAAATACAGGAGTATGAGCGC
TCCTGATCTACACGCATCTCCAAACAGCCAGATAGGAATGCAACCTGATG
AAAATGCAATGGTTGCCGCCCACTCACCTCAACAACGAGTGATGAATCCG
TTCCAACAAGAAGGAGCGTCCTCTCAAACCGAGGATGCTGGGCAAACAAT
CGCGAGCCGGTTTATGAATGAGGATCCATCAACTTTGCTTGATGACCTCC
ATAAAACGCAAATGCAGCAGGGACTGACTGGGCCAGGTGATTCAGCCGTC
AGTATAGGAGCAAGAGGTGGTATCGGTCTAGCTCCTGACCAGCAGCAGCA
GGCTGAAGGTGAGGGTCGGCATCGGATTCCAGAGCCAGCACCTGATGACC
TCTTACAACAAGTCCGTAATTTCAACCATCGAATGGATGTAGAGCAACTA
CAACATCGTCAACGAATCGAGGCAGAAAAGAAAAATCTGAATCGTGATTT
CGGATATATGGATCCAAGTGTGGCAGATGAAATACGTGGCAACAACGGAT
TATCACAAAAATTCGACGTAGAACGTAAAGATCTAGCTACGGAAAACGAC
ATGCAGCTACTACGAAGTCGTTCCCCGTCTGAACCGCGCCGTCACGGTCA
AATTTCGGTCATGTCGGGAGATACGGTGCAGTTTAATAGTGGACGTTTAT
CGATGGATACTAATGATGTTTTATCATCATACAGAGATGGCGCTTTTTCG
AGGAATAAAATAGGCCGCCCTCGTAGACGCCACAAGCGTCATCATAAGAG
ACGTTTTTTACACCCGTTCACACGTGGAATCATTGAACACCCTATGTCAT
TAAATGATAATGATGTTGAACTTAGAGTGAATGGTCAAACACTGACAGAC
AATACACAATTGCGTAGCACGATTGTTGATGGGAAAGTCAGGCCAGGGAA
AGGTAAAACTTTCACTTCAAAAGATCCAATACAAATCGAACTTTCACACG
ATGATCAAAAACGAAAGATCGTTAATATCGTTACTAATGGGAAATATCGA
GTGATGAACGATAAAAAACGATATCAGATACCCCATAAATCAAATTAAAT
GgctttttggaaatatttttgcttgttCCTTTATGTATTTGCATTGGCCT
ATTGCGCTGATATAAAGAAACATCATAATGTTCATCACGAAGACTACACA
CACCGACAAACAGTACGCCGACAACAAGTTATACACCCGATAAACGAAAA
CGAATCATCATCGGTTAAAAATGACAACGACAATGATGAAGATATCGAAT
CTCTTGGAAAACGAATTGATGCAACCGGCGCCGAAATCTCAAAACCGAAA
CACGAGAATTCGAAAGAAACAGTAGTGGCTACAAAAGCAATTATAgctaa
aattaaagaaatacaGGATAAGATTTTTAAGCGTACCAATGGTAATAAGA
ACTTAGAAGCTGAGCTACAACTCATGTCGCCCATCCCGGCGCAGAAAAAT
GTTGAGTCATCACCTCTCGTTAAAAAGAAGCCCGTGGACGTAAGCGGAGA
CCGGCGTAAGATTATCCCCGAAGACGTAGTCGATAAAATCTTGGAGAAAT
TTCAACAGTTAAGAACGGAGGCGAAACATATTGCGATCGCATCTGCTGAT
GATCCGAACAAAAAACATGAAGGCGCTGCACCGTCGCCCAATGTGATACC
AGATGAGCTCACAGAAAATAACTCCCCTGGAAATCCATATGCCAGTATCG
GCCCTCCAAAAGAGAGTGAAGAAATAGCTAACCGAACTAGTAATGCTGAT
GTCAAAAGTGTAGGTCTCGAACCTCAAAGTCCAAGCACCAGTCTCCCAGA
TGCTGTCTCCAACACTGCTGGTCAAATACAAATACCTATTGGAAATACAG
CCTCTGCCGGCAACTCTCCTTCAATTCCAAACGTCGATGGAAAATCACCT
AAAGGCATTCCAATAATGTTTATTAAAAATGGACCAAATTTAATCCCGGT
ATATAATAATGGAGAAAATGGTGGAGCTTTGAATTCACCTATTTCGGCAA
CTGGTCAAGCAGCTGTTCAATTTAATAATAATCCTTTACCAGAGCCAAAT
TTGCCAACGAATGTAGTTCCAATGATGAATGAGTTCAATGGTGGAGAGCG
AGGTGAGAATCCAGAATCAAGATGCGATATCCCTGGGTCCTGCCCAAACC
CTGGCGAAGGAGGTTCAAATGATTTGGAACAACATATATCACCAGAACGT
GTTTCAGACACGCAAATGACTGGTGATTTAATTGATAAATTGATTCATTC
ACCAGGCTTCCCACAACTGgcatcaaaattaatttcagaaGGTAAAATCA
ATTATCCTGAACAAGGTGGTGGTGAACGAATGATGGATGGGATGGGAGAT
TCAAGAAATGTTGTCCCTATGACGGACTCGAATGTAGAAGGTATGGATCA
TTCTAAAGTTAACTTTGACATGAAAGGTAATTATGCATCAGCAAATCTAC
CAGAGCCATCAATGGCCCGTGAGGAACAACAAAGACGTGAAGAAGAGGAA
CGACATCACCAAGATGtcgaaaatttctttgaacATCAACCTgcatcaaa
atctgatgtttcTTCTAACATGTATAACAGCCGTACCGAGGGGCGATCAA
CTCATGGTTTAGATGGTCGATACGTGAATGATATTTCAGATCCAATGGAG
GACGTCGAATCGAAATTCGGTTCAAAATCAGCTGATGAATTGTTAGATTT
CGCTAAATACAGGAGTATGAGCGCTCCTGATCTACACGCATCTCCAAACA
GCCAGATAGGAATGCAACCTGATGAAAATGCAATGGTTGCCGCCCACTCA
CCTCAACAACGAGTGATGAATCCGTTCCAACAAGAAGGAGCGTCCTCTCA
AACCGAGGATGCTGGGCAAACAATCGCGAGCCGGTTTATGAATGAGGATC
CATCAACTTTGCTTGATGACCTCCATAAAACGCAAATGCAGCAGGGACTG
ACTGGGCCAGGTGATTCAGCCGTCAGTATAGGAGCAAGAGGTGGTATCGG
TCTAGCTCCTGACCAGCAGCAGCAGGCTGAAGGTGAGGGTCGGCATCGGA
TTCCAGAGCCAGCACCTGATGACCTCTTACAACAAGTCCGTAATTTCAAC
CATCGAATGGATGTAGAGCAACTACAACATCGTCAACGAATCGAGGCAGA
AAAGAAAAATCTGAATCGTGATTTCGGATATATGGATCCAAGTGTGGCAG
ATGAAATACGTGGCAACAACGGATTATCACAAAAATTCGACGTAGAACGT
AAAGATCTAGCTACGGAAAACGACATGCAGCTACTACGAAGTCGTTCCCC
GTCTGAACCGCGCCGTCACGGTCAAATTTCGGTCATGTCGGGAGATACGG
TGCAGTTTAATAGTGGACGTTTATCGATGGATACTAATGATGTTTTATCA
TCATACAGAGATGGCGCTTTTTCGAGGAATAAAATAGGCCGCCCTCGTAG
ACGCCACAAGCGTCATCATAAGAGACGTTTTTTACACCCGTTCACACGTG
GAATCATTGAACACCCTATGTCATTAAATGATAATGATGTTGAACTTAGA
GTGAATGGTCAAACACTGACAGACAATACACAATTGCGTAGCACGATTGT
TGATGGGAAAGTCAGGCCAGGGAAAGGTAAAACTTTCACTTCAAAAGATC
CAATACAAATCGAACTTTCACACGATGATCAAAAACGAAAGATCGTTAAT
ATCGTTACTAATGGGAAATATCGAGTGATGAACGATAAAAAACGATATCA
GATACCCCATAAATCAAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012396XLOC_012396Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022105-proteinTCONS_00022105-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022105-exon-sc0000405-1491911889:266573..266761TCONS_00022105-exon-sc0000405-1491911889:266573..266761Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1510915933:266573..266761TCONS_00022105-exon-sc0000405-1510915933:266573..266761Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1575043694:266573..266761TCONS_00022105-exon-sc0000405-1575043694:266573..266761Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1491911889:267882..268403TCONS_00022105-exon-sc0000405-1491911889:267882..268403Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1510915933:267882..268403TCONS_00022105-exon-sc0000405-1510915933:267882..268403Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1575043694:267882..268403TCONS_00022105-exon-sc0000405-1575043694:267882..268403Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1491911889:269180..271809TCONS_00022105-exon-sc0000405-1491911889:269180..271809Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1510915933:269180..271809TCONS_00022105-exon-sc0000405-1510915933:269180..271809Clytia hemisphaericaexon
TCONS_00022105-exon-sc0000405-1575043694:269180..271809TCONS_00022105-exon-sc0000405-1575043694:269180..271809Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:266573..271809 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.68848 1.46584 0.948963 0.567007 0.635986 0.450821 14.1684 17.7183 3.98718 4.24397 9.16666 8.03049 18.6363 14.7413 11.0342 26.3444 17.785 16.8309 0.801706 0.811353 10.2124 11.626 6.33496 7.1324 10.6024 12.4827 1.92323 1.1406 1.00707 0.9324
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022105 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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