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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022082 ID=TCONS_00022082|Name=TCONS_00022082|organism=Clytia hemisphaerica|type=transcript|length=1133bp
aaaaaatcaaatcattCAAATCTAACCATTTGGCTTATCCCAAAATCCTA
CACTTGGTTTGGTCACTCACTGGCTCCCTGGCTAGAAATCCCTTCTAATC
TAATCAATACTGGCCAATCAAATGGCTTATCTATCTATCTTTTGGTTGGC
TTTTGAAGTCATGGCTGCCACTTTCCACTCTGCATAATGCTCTAAGATCT
TCCCTGGCCTATCAAAAAAAGTTTGGTGGCATATCTATCAAAAGTCTTTT
GCTGGCTATCAAACTGTGGTTCACATGAATcattcaatgtttttgtttct
gTTGGTTTCAACAATGGTGATTGAATATTATAAGAATTGAAAGATTATTT
CAGAGGAGCTGGCGAAGTAACATTTACTAAAGCCAATAAGGAAAGAATGG
GCGAAGGGGTTGTTGAGTTCCGTACATACAAAGAAATGCAAAGAGCTATG
AAGAAATTTGATGGTGTTGAATTTTACGATCGTCGATTGACACTCATTGA
TGACAGCCCTGGGCCACCAAGAGATCATTCAAGATCAAGGAGTCGCAGCA
GGAGCCGTTCACGTAAGCGATCCAGAAGTCGTACCCGATCACCAGACCGT
AGGAGAAGACGAAGCCGCTCGCCTGCCAAATCAGTATCACGCAGTAGAAG
CCGTAGTCGCAGCAGATCTCGCTCACCTAAACGCTCTCGCACAAGATCCC
GATCTCGATCAAAAAGTCGTTCTCGAAGTAAAACACCAGCCTCAGAACGT
CGTTCCAGGTCAAGATCGAAGTCAAGATCCCCGCCACCTGCCGAAGATTA
ACGTACTGTCATAGAACTGTATGATATATCTGTACGACTCTTGGCGGCTC
GAGTGATGCACTCGCAATCGTTGCGAAAACGGGAACAAAGTAGAATTCTT
TTACCAAACCGAGACTGAACCAAACCTTTTTATCCTTTTTCGATTGTAAA
TACATTTTATCTGTGGGAAGGATACtacaaaacatttttgcaataaataa
atttgaacaATGTcacccaataatttttttgttctacacatttttttaag
gaTGACTGGAGTTTTTCAGCATTCTCAATCCTTAGAAATATATGCTATCA
CTCTTAATGTTATGCAATATTCTATGTTTATTG Run BLAST on NCBI transcript from alignment at sc0000403:262691..267372- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022082 ID=TCONS_00022082|Name=TCONS_00022082|organism=Clytia hemisphaerica|type=transcript|length=4682bp|location=Sequence derived from alignment at sc0000403:262691..267372- (Clytia hemisphaerica)
AAAAAATCAAATCATTCAAATCTAACCATTTGGCTTATCCCAAAATCCTA
CACTTGGTTTGGTCACTCACTGGCTCCCTGGCTAGAAATCCCTTCTAATC
TAATCAATACTGGCCAATCAAATGGCTTATCTATCTATCTTTTGGTTGGC
TTTTGAAGTCATGGCTGCCACTTTCCACTCTGCATAATGCTCTAAGATCT
TCCCTGGCCTATCAAAAAAAGTTTGGTGGCATATCTATCAAAAGTCTTTT
GCTGGCTATCAAACTGTGGTTCACATGAATCATTCAATGTTTTTGTTTCT
GTTGGTTTCAACAATGGTGATTGAATATTATAAGTAATTATCTTCTTTCA
AGATTCGAAAACAACATCCTCCTGCAATAACGGTAAAGGTTTTTATTTAT
TTCTGCCCCTCAGTCTTTAGAATGTATCAACACATTTATTTTGATTTTTC
CTTTAGGAATTGAAAGATTATTTCAGAGGAGCTGGCGAAGTAACATTTAC
TAAAGCCAATAAGGAAAGAATGGGCGAAGGGTAAGAGAGCATTTGTTTAC
AACTTTTCTTCTCAGGATATCTATCCAAGCTAAGAACGAGCCCCGACCTT
GTTCTCTGCGTATTAATATTATCAGCTTTTTGACGCTTACTGATAACGCT
AAAAAATACCCTGGCATAGTCTGATTTTCTAAAACAAAACGTCAGATTTT
GTTTGTTCCTGGGTTTGAAACCATTGCATTGCAGTGTAACTTTGTAACGT
CAGATTTTTTATGACATATTGTTTTTAGAAGTTCCCCCTTTCTTTTTTCT
GACATCCACCAAATTGAATTCCCTCCAAATTAAATTTTTTGAAAATATGA
TCTCTTTTAAGGTGGTTTTGCATTTTTTTGCTGTTTTTTTACGCCATTTT
AAGGATAAATTTTTCAGCAAATGCCAAATTGAATTCCCGCCAAATTTAGT
TTTTTCGTCCATCCGCCAAATTAAGTTCCCTCTAAAAAACTTTTTTCTCT
AAAAAACTTTTTCGGCCATCTGCCATATTAAATTCATGCCAAAATTTCTT
CCTTTAAGGTATACAATTATTTTCACATGGATTTAATGCATAGAAAATTT
AAAGCCTAACCCTGTTTTTTGCCCTTTTTTAAAAACTCCAGCAGGCTTTA
ACTTTCGACTCAAAAACATTTGGGATAAATAACTATATAAAGTCTCTCTC
AATATAATTTGCAGCTGAGACAAGAAAGGCTGTAACTTTTGACAGAATTC
GAATTAGATGGCGGTTTTGTGCTTGTTGAAAAGATAAACAGGAGTGGAAT
ATCATCATAAAAAGTCGAAAATTATCAGAAAATGAAGAAGAAGAATTTAA
TTCAACGTGCTAAAAATTCAATTCGAGCTTTTACCTTCAACCTTCTAGAC
ATTGATGACAAGCAGATATTTNAAATTCAATCCGAGCTTTTACCTTCAAC
CTTCTAGACATTGATGACAAGCAGATATTTAAAGACAGTAAACATATCAA
AATTATAAAAAAACTTAAACAAAAATCTTGCTATACTCAAACCTGACAAA
GGGAACGGTATCGTGCTTCTAGACAAACCTGTTTACCGTGCTGCCCTCGA
TAAATTATTCAGTGACACAAAGAAATTCAAAAAAGTTAACTCAGATCCTA
CATTCACTCGTCTTCGAACCATACAACGATACCTCAACACTATTAAAAAG
CGTGAAGAAATCAACCCTGACGAATACAAAGAAATGCGACCAAAAAATGC
AAAACCTGCTCGTGCCCACGGTCTACCAAAAACTCACAAAACATTCGAAA
CAGTTCCAAAGTTTCGTCCTATCATTGACACAACAGGATCCACACACTAC
AAAGTTGGTAAATACCTAACAAAACTATTACAACCACTTACGATCAACGA
CTACACGCTAAAAGATTCTTTCGATACCGCAACAAAAATACGCGATATTC
CAAAAGAACTGTTCGATGAAGGTTACGTTCTAGTCTCTTTCGATGTTACG
TCACTTTTTACGAATGTCCCCCTACAAAAGACAATAAATGTTATCATTGA
TAGAATTTACAACAAAACACAAATCAAAACCACATTAAAGAAATCGACCA
TCAAAAAACTCATTAAAAACACATGTACCAAAACCGTTTTCTCGTGTAAT
GACCAGCTTTACGAGCAGATAGATGGTGTCAGTATGGAAAGTTCAATGGG
ACCCTTACTTGCCAACATCATTATGACTNCGCCGTTTCTTTCAAAATCCA
ATGTTGTGTATCGTTTCCGTTGTCCTGGTTGTTCCGCAGAATACATCGGC
AAAACTGACCGGAACCTACACGAACGTTGTCTCGAGCACTCGTACCGAAA
AGATAGTGCTATTTGTAGTCATCTTTTGTCCTGTTCGAACTTTAACGACA
TCAACAAAATGCTCTTGTTTGAACAAAAACCATTAAACAAAAAAGAAGAA
AAGGAATATATTTTGAACACAATAGAAAATAACACTGATAAATGGAATAT
TCTTTTAATAAAAGAAGCAATTTATATCAAAAGGCATTCTCCTATTTTGA
ATAGTGGCCTTTAAAGCCTCTAGAGATTTGTATCTATTTTCTTAGTTTTA
CTGCATTTTAATTAGTCATTTAATTGTTTTAGATTTTGAAATCGTTTTTT
AAGCTCAACTTTCTTTTACAGAAATCATTTGCCTGAATGATGTATATGAT
ACTATACGAAATATAGCTGTTTTTAAATCTAAATTTTCATCTTTTGCTCT
GAATATCTTGGCTTGATGAATTTTCTCGGACTTGCTTTTATCCTTTAAGA
ATTTAATCAACTTCAATAATTGTGCTATAATTATCACACGAGTGATTCTT
TGTTCTTAGAACATCATCAATGTGAAAAAAAAATTCAAATAAATTTATTC
CATCGAAAGCTATAGTCCAAATTTTATCACTGATCCTGTAGAGAGCAATT
AATCGTTAATCACACTCTCCAATGCCGCGCCAATGTTTACAAAATTGATT
TCAATGTTTTTTCTCTTGCAGTTTTTCTGCATCAAACGTTTTAATTGCAT
TCGAAATTTATTTTGTGAGAAAGAAAATCAATAAACAACAATAAAAGAAA
GACATAAAGAGAAGAGAAAAATATACAACTCTCAGTGTAATTTCTGTAAT
TTACTTTCCTAACTGGGAAAAAGTAGTGACAGTCATTGTGCGATTAGCTC
GTAATCACATAATAACTCGTGCAATTATATTCGAATTGCACTCGTTATCA
TGTGATTGCATTATACTTATTTGACTGAATGAATATTTTTTGATTTTTTT
TTCGCATTTATGACATTCTAAAATTGAAGAATTTCTGATATAAAAATGAA
GATCATAGCATTATTCTACAAGAAGTTGATTTTCTTCTTCTTCATTTTTC
ATCTTTGTATTCCATTTTTTGATTTTTTTCTTTTCTGATGATATTCCACT
GCAAATTATCTTTTAAACAAGCGCAGAACCGCTATCTACTTCGAATTCTA
TCAAAAGTTACGGCCTTTTTGTCTCCGCTGCAAATTATATTGGGACATAC
TTTAGTTGAAATTAAGAGGCTTCGAAGTACCTCCGAACCAACCAACTTTC
TTTATTTGTTAGAAAATGTTAAGCAAAACAAAGATTTGTGCACACTTAAA
GCTAAGGGATGTCACTGATGTCACTGAGTTTGTAATGCCAGTGGTCAGTA
AAATGAAGTATTTGCCCTACTGTTAAAATGCAATTTTGAAGGGAAATTTG
TCTAGTGCAACTGCCTCATTATTTTTTCCAGGGTTGTTGAGTTCCGTACA
TACAAAGAAATGCAAAGAGCTATGAAGAAATTTGATGGTGTTGAATTTTA
CGATCGTCGATTGACACTCATTGATGTAAGTTTTGCTTTTTGAAAATTAC
TATCAAGCTCAGAGAGTATTGAAAAAAATTAGTATTAAAATGAAATGATA
CATCGTATATAAAAACTATATTTGTAACAGTTTGTAAGCTTTCCTTCTTG
TAGACCAAAACACAATCAACAATCTTAAAAAACTCTTCTTCACTATACAG
GACAGCCCTGGGCCACCAAGAGATCATTCAAGATCAAGGAGTCGCAGCAG
GAGCCGTTCACGTAAGCGATCCAGAAGTCGTACCCGATCACCAGACCGTA
GGAGAAGACGAAGCCGCTCGCCTGCCAAATCAGTATCACGCAGTAGAAGC
CGTAGTCGCAGCAGATCTCGCTCACCTAAACGCTCTCGCACAAGATCCCG
ATCTCGATCAAAAAGTCGTTCTCGAAGTAAAACACCAGCCTCAGAACGTC
GTTCCAGGTCAAGATCGAAGTCAAGATCCCCGCCACCTGCCGAAGATTAA
CGTACTGTCATAGAACTGTATGATATATCTGTACGACTCTTGGCGGCTCG
AGTGATGCACTCGCAATCGTTGCGAAAACGGGAACAAAGTAGAATTCTTT
TACCAAACCGAGACTGAACCAAACCTTTTTATCCTTTTTCGATTGTAAAT
ACATTTTATCTGTGGGAAGGATACTACAAAACATTTTTGCAATAAATAAA
TTTGAACAATGTCACCCAATAATTTTTTTGTTCTACACATTTTTTTAAGG
ATGACTGGAGTTTTTCAGCATTCTCAATCCTTAGAAATATATGCTATCAC
TCTTAATGTTATGCAATATTCTATGTTTATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022082-exon-sc0000403-1575043694:267040..267372 | TCONS_00022082-exon-sc0000403-1575043694:267040..267372 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1575043694:266843..266916 | TCONS_00022082-exon-sc0000403-1575043694:266843..266916 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1575043694:263498..263591 | TCONS_00022082-exon-sc0000403-1575043694:263498..263591 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1575043694:262691..263322 | TCONS_00022082-exon-sc0000403-1575043694:262691..263322 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1510915933:267040..267372 | TCONS_00022082-exon-sc0000403-1510915933:267040..267372 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1510915933:266843..266916 | TCONS_00022082-exon-sc0000403-1510915933:266843..266916 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1510915933:263498..263591 | TCONS_00022082-exon-sc0000403-1510915933:263498..263591 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1510915933:262691..263322 | TCONS_00022082-exon-sc0000403-1510915933:262691..263322 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1491911889:267040..267372 | TCONS_00022082-exon-sc0000403-1491911889:267040..267372 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1491911889:266843..266916 | TCONS_00022082-exon-sc0000403-1491911889:266843..266916 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1491911889:263498..263591 | TCONS_00022082-exon-sc0000403-1491911889:263498..263591 | Clytia hemisphaerica | exon |
| TCONS_00022082-exon-sc0000403-1491911889:262691..263322 | TCONS_00022082-exon-sc0000403-1491911889:262691..263322 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403 | supercontig | sc0000403:262691..267372 - |
Blast
The following BLAST results are available for this feature:
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