TCONS_00021991 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021991
Unique NameTCONS_00021991
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1697

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021991 ID=TCONS_00021991|Name=TCONS_00021991|organism=Clytia hemisphaerica|type=transcript|length=1697bp
cttgTTTTTCAGATCACCACAAGTAAAGTACCGTCATGCGATTGGTGGAC
ATCCTGTACCATTGAATGGTAAATCGAGTGATGAAGATTCCAGTTCGGAT
GGCAAGAACGGTGTGGGTTCCAGTCTCTGTTCAATTTTACGTCCCGAGAT
ACGCTTGATGCTACTGATAATGTAAGCTTCACCAGCAACAGCTATGAACT
CATCAGCTATCGGACTTCTCATCATCGTCATTGCATCCGATCAATTATCT
GTAATCCAAGGTTTCATATCAACCAATTTCGATCAATGCCGTCAAGATTA
CTTTTACAATGGAAGACCTCCTAGAagcattaaaaaaattaataatgtTG
ATAATCTTGGAAATGATGCAGATACAGAAGAAATTTGTCAATCATATGAA
ggaattaaatattttgcaacACTTTATGATAAGAAGTACAAGATACCAAG
ATACTCCGCTTACCTCCTTGACCCGAATTCCAATAATGGTGGACAACCAA
GTAGACGGAGCACTTGGTTTATTGAACCAGATTTAGTTGAAAAAGATAAA
TTCAAAGATATGAGCACTTTAAGTGTATTTGGAAAAGCCAAAGAGAAGAT
GGAATTCGTTGCAAATTCTCAAGCAACGNAGTGTATTTGGAAAAGCCAAA
GAGAAGATGGAATTTGTTGCAAATTCTCAAGCAACGGACGATGATTATGA
AGGATCTCTTTGGGACAAAGGCCACTTGAATCCAAACAATTTCCAGAATG
GTGCAGGCAGAACGGCAACATTTACATTAACGAATGCGGTTCCTCAAGAT
TCTTGTTTGAATCGAAACTATTGGAAAGAAGCTGAAGACGAGGCCAAAAA
ATTATTGTTCCAACATTGCACTGATGGCAAAGCTTATTTTATTACTGGTG
CTGTCCCAGATGATGACAAAGCTATCTATGTTGATAATAAGCCAAAAATA
TCAATTCCTAAGTATATGTATTCTGCTGCTTGTTGTGATCACAACACAGA
GAAATGGAATAGTTTCTCATTTGCATTTGCTGCAGAAAATAAAGCTGGCG
TGGCAGGAGTAGCAGTATTAAAGGTTTCGAGATTGTCAGAGATGACCGGT
ATTGACTTTTTTGATAATGGGCAGTGCTATTCTCATTCGATTCCTACTAT
GTTGCATGTAGGTAAATTCAGCGAATGGAATAAAGTCAGTTTAAAGAAGC
GAAAAGAAGAAGACACGAAATTGGAAGAACTTCAAAAGAAGTTTGAGGAG
GACATTAACAAGGGCCATAACAATTGAAACAAAACAATGCTGACATTACT
AAAAATACACATTGTCGTAAATTATGTGAATAATAAACAAACAGAATAAA
CAGAATAACTTATTATATCTTTATATAATAAATGTCAAGAAGTTCTGCAC
ATGTTTTTATTAGGAGTACCTTATCGGCAAAAACTTAGTCGACCTtgagt
gactaaattttggcttagtgactaaaattagggccgactaaaactttggg
ccgactaaaattaaggccgactaaaagtttgggccaaattaaaagtttat
aattaagctttccttattttccagtattttaagctttctcctattttcca
tctgcttgtaaatttagaaatggcccaaattttcagtcggtcttaattat
tagtcggcctatagtgactaaattttgacgaggtgactaaaattagg
Run BLAST on NCBI

protein sequence of TCONS_00021991-protein

>TCONS_00021991-protein ID=TCONS_00021991-protein|Name=TCONS_00021991-protein|organism=Clytia hemisphaerica|type=polypeptide|length=206bp
MEFVANSQATDDDYEGSLWDKGHLNPNNFQNGAGRTATFTLTNAVPQDSC
LNRNYWKEAEDEAKKLLFQHCTDGKAYFITGAVPDDDKAIYVDNKPKISI
PKYMYSAACCDHNTEKWNSFSFAFAAENKAGVAGVAVLKVSRLSEMTGID
FFDNGQCYSHSIPTMLHVGKFSEWNKVSLKKRKEEDTKLEELQKKFEEDI
NKGHNN
Run BLAST on NCBI

transcript from alignment at sc0000401:191869..200322-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021991 ID=TCONS_00021991|Name=TCONS_00021991|organism=Clytia hemisphaerica|type=transcript|length=8454bp|location=Sequence derived from alignment at sc0000401:191869..200322- (Clytia hemisphaerica)
CTTGTTTTTCAGATCACCACAAGTAAAGTACCGTCATGCGATTGGTGGAC ATCCTGTACCATTGAATGGTAAATCGAGTGATGAAGATTCCAGTTCGGAT GGCAAGAACGGTGTGGGTTCCAGTCTCTGTTCAATTTTACGTCCCGAGAT ACGCTTGATGCTACTGATAATGTAGGTTTTACTTAGACTTCCTCAGTCCC TGTGCCTGCCTAGTCTAGTTTTTCTTCCTGGAAATCTGCTAATACCTGAG TTTAGAGCCGATTCATTGTCGACAGTGTTGTGATTTCATAAGAAGTATGA TGTCATGTCTCTAAGTCATTCCAAAACCGAAAGCATGTTAGGTACACGCT TTTCTTATAAGAATGGTGTAAATCCATTTTATCGTGGATATTCTTAACTT TTTGGGAAAAAATTTTCTTACAACATTCTTAGGTTAGGATCCTAATTCAT ACATTGCATACTCAAACATAACATGGCGTTTTTTTGAAAGGAGTGAGTCT TAGTTGGGGGATGATTGACAATTTACAATTGAAAATGCTCTAAAATGGCA TTCTTAGCTTAAGTAGCAAAATTCACTGATGGTGATATTCTTAGCATTAT TCTTAATTTTTTGGCCATTTTATCATGGACATTATCATAGAGTGTATTCT TTTAAAACACGTGTAATATGGCTCAATTTACAATTTTGATTCACGAAGCA ACCCCTGCAGTTTTTTTGCTTTGTTTTCCTTTTGTTCGAAAATTCGGACA TATTTTTACTAGACAGAAACATCATAAATTTTTGACTGAAATAGCGGATT AAAATATCACAAAATTTTACTGAAAGTTATCACGCTGAACTTTCTAATTA CGCTACCCGAACGCAAAATCATAGTCTGTATTTCTGAATGGATGGCCAAA CATGGCTATACATCTCGATAATCAAACAGATTGCCGAACTTAACAAACAC AGTAAAAATGCGTTTATAGTGGAAAAAATTTACAACTGTTTTACGAGCTT TTAATCTTTAAAATCAAACCAGACATTTTGCCAAGAAAAGTGGATTAATT GATGTGGTTCTATAATACAGGTAGGTTTTGTAGTATTATTTTAAACTTAC ACGTTTTTTTCTTTATAAGAACAAACTATATAGAACATAAGGCTTCGATT GCCAAAGAATTAAGAACATATTAAGAGCAATCTGAAGCTTGGCGGACTCG AAAACGTGCTGTTTCTTAGGAATTTGCACAGAATTTGCTCAGAAGATGTT GAGAATAAGAACATTTTTAGAACATTTTTAGGCGTAAACTCGAAAAAGTC AATAACATTTGAAGGCTTCAATATAGTTTTTAACGTTTTCATAAAGGCGA CAAAAACGACCAAAATTAGTCCAAAACATAAGCAGGTTGTTTTTGGTCAT AAATTAAGTACGGGATATATTGACACGACCAATAGATATTTACTTTATCT CACTTTCAATAAATGGAATCCATATACAATTCAATAAGATTTTCATGAAT GTGACTCGAGTCAGGGACTCATTTACCAAGTTTCTGTAGATCTTTTTTTT CTCGTAAGGCTGCATCAATAAGGAAAAAAAATATCCAACACTCGTGTTTA CTTTGCTTTATCTGTTAAGAGTAATTTATTCAGGATAAACTCCCGAACGG GAAAATCTTCCCGATGAGGTTTCGAAAATATCTCGGCTAAAATCCAGAAA ATCGTCCTCTCAACATGAAGCTTTTCATTTTTGGTTTTTAATCAAGCTGT TAACATGACAAATTTCAGATGAAAATATGTTTTAGGTATTTGTTAACAAG GCTTTTGTTATCTTTCGTCAAATTTTTTCCTCTGATTTTTGTTTTTTTCC ACTTACTACCAACTAGAAGAACCATCATTTTTTCAACAGAAACAGAAACG TTTTTATAAATGTTCTGCAACTCTCTCGAAGGCAGATCTCTTATCTAACC CTATTCAACCTAGGCTTTTAGGGGCGTTTCATCAGAACTGGGGGGGGGGG GGCTTTTCTGTACCACCCCTTAACTTTTGATCTATTTGGTCTTTTTGGAT GAAATTTGGCACACACGATCCTTGTCACATAGGGTAACTTTTGCCAAAAA TTTTTTTGCGCAAAGTGATATAAATAGCTATTATATTCTAAAAAAGGCTT GAGAAAAAAGTTGCCTGGGTTTAAATTGGTTAATTTATCCTAAATATTCA ATAAATTACGGTTTAAACGATATATTTGACATAAAAAATACATTTGTATT GGAAAAGTGTCAATTTTTGTGACACCTTACTATACTGTCAGAATTGTCAT CATGTGCAAGGTATGAAAATTTTTATTTATTTTGAAGCTAAGTAAAAGTT AGAAATTTACAGAAAATTTCATGACAAAAGCTCTATTATTTCAGGAGCTA ATACCAATAATTTGATCTCCGAACAGAAACAGCCCCCCCCTAGGCCGAAT AGGGTTAAATACATTATCCATTTTAGAAGTGTAAATTATTATGACTCAAA CTTGCTTGAATCCGATTTTTTTTAAATCAAATACTTTTTAATTTTTCAAT GTAACTTGATAGGAGTTGACTTCTGTAAATGCCGGAAGAAAATATAATTA AAAAACAGTTTTGGGAATCTTCATATCTCGAATTTTCTCTGAATGTCACA TAAGTAACCAAGGAATGCTCCAATTGTGTAATTTTTATATGTCTTTGAAC AAAACTAATCAATCCAGAAGTTTTTATTGCTTTTTGTGTAAAATGCCCCC ACCAGCGGTTTGCGTGAATGCTTGAATGGGCTTTTTCAATTGCGTGAATG CGTGAGGCCTCGGGGAGGCCTCGTAAACCAACACACATATTTTGCTTTGA GAAGTTCATCTTGAGTGGATTAAATGTTCGATTAAAGACGATACAGTGTG TGGCCCCTAAAATGTAACCTGATAACAAGTGTTCATAATTTTCGTACACG CACAGTAAACCTCTGAAGGTGCTTGAAAATTAAACATCTGAGGAAAATAG TCCTACCGCATGAAATTCTACAACAAGAATCTTGTTGTGCGCTGGAAAGT CAAAAACTAAACTTTCCTAAAAGGAATGGCAATGTCAACAAAGTTGCATG ATTGTTTGAAAATAGGGCACCATTAATTTCAAACACAATTACGCAACTTT TTTGACATTGCCAGTCCTTTTAGGCGAGCGCGGTCCTTACGATTTTGAGA TAGTATATTTGTCAGATTGTTATGCTTTCGTCCATCCCTTTAGAACTTCA GTGTGGTGGGCAGAAAACAATCACAATCTGATCTCAGGTTACTTAAATGC TGGTGGCCCCTAAAATGTAGGTTTTGCTTTGATTGACCACAGTGGTTGCA AAACTGGCTCGATTATACTGAACTTTCGCCCAGTCCTTCCTGGTGTAAAT CTCTTGGTGCGAGAAACGAAAATTTACTAGTATCATATAATTATTTTTAA GTATCAGCTACACTTCTTTGAAAGAAGATCGCTGAAAATATTGATATTTA TACATTTAACATGGAAAATGACAATACCATTTGAGATTAACATTTTATAA GTGCCTACATTTAAGAACATCAAACATAGAACGACTTAGAAACTCGAAAA TTTATTGGTAATTAGTAAAATAATTCGAGAAAATCATTATGATAGCAAAC CATCATTTCAGTACCCTGAGTATCAGAGGTTAAGGTTTCAAAGAATATAT TAGCCTCTGAAGACTAATAATATCAATTTTATCGCGCATGTGTCAATCTT ATCACTGTAGAAAGAATCAAAGATGAAGAGCAAATATTACTTTATTAATG TCTAGCAGACTGTATCAGTATGCAGTTTACTGTTTACGAATCCCCCAGAA ACCTCCAAGTGTAATTGAAGTGAGTTTCTTTCGAAAGAAATCTAATGTAT AACAGTAATTACTAAACTATTAATTATGGGAAATGTCACTTTAATTTAAT CGAAATAATAGACAAACTTAATGTTATGATTCTCTATCACTGACTCTTTT TAAAAAGCATTGATGATATTTTTTAGTCCCGTTTTTCAACGACGGGAATA AAAATATCAACTTTGAACTTCATCCAAGATCTTGGATGGTCGTCATGGTT ACTTTGGTCTTCGCTGATTGCGCGCTGAATAGAATCTCGATTCGTCGGCA CATCATCGATATATGATTTCGACCTGTGCTTTTCACGGTATCATTTCAGG GGAACTCTGAGCTGTGATCAAACACGGAAATATTACTGTTCTTTTGAATT TTACTTTCAACTATTCTTGTCATCAAAGGTTTTGAACCATCTGCAGAGTG GCAAGCTATACAAATTATACTTTGTTTCAAACTGATTGTTTCACATTTTA CGCTTGGTCTACAGTATCACATTTACATTTTCCTTTGTAAAGAAGGAATA TTTCATTTTCCTTCCGCTTTCGTTAATTGTTTTCCATTTTTTTTCCGCTC TTTCTCTTTATTAATCTTGGAATTGCTTTCCTTTACTCGCTGTAGAATGT TTTTTCGGTCATTGACCCATGGACGGAGATTATCCTTTGGTTCTTTGACT TTTAGGTTTTTTCTATACTAAAGCACGTATCCGGAGCTTCATGGAATCAA TTGACGCGCTTTCCAGTTGTTTTAATCTCTTCATCTTGCTCAAATTTGTA TTATCCTCACTAAAGTCTGTCTCAATATAATTTGCAGCGGAGACAAAAAA GTTGTCACTTTTGAATGTTATCAAAAATTACACTAGCTAAAAGAATCCTA CCGGGTCTGTGAGAAGGGGGCGCTATCATAACAGATTGCCTCCATAAGAA TTGTTAACAATTTCATGTTTGCAATTGTGATTCTTTGTTAAAATATGGCA GTAAAACGAAACCTACAATATAGGGGCCAATGAAAAAAGCGACATCACTA TGAGCGATTAAAAGATATTGTCAACATCAAAGCTTTAGTAGAATAACTTT TGGGAAAGAAAATTGACATACGAAAGTTTCCAACACTGCAAAAAGTTCGG TAAAATATCTTTAACTAGGGTCTCTAGAAAGATTTTAAATTCAACCTACA TTTCAAGGGCCATACACTGTATACAGCGTGTCCGAAATACAAAATAGGGT TTTTTTATAAAATCAATTTACTTTACGCGAAAAAATCTAAGCCTGCTGCG CAAAAATAAGTGCTAGTAAGGCACATATTGTGACTGTCTTTATCATTGGC GTGGTGGGTGATGGCAGTTTATTAATTCTACCTAATTCTATAGTGAATTT TTAGTATTTGCCACTTACAAAATATGAAATTCTGCCTGATGTAGCGGACA AAACTTTGACATTTTATACATTTTCTGTTAGGCCAACCATCTGTGAGTCT GAAAATTTTAGAATCGCAATGAAAAGAATTGATAAAGAAAAAAATGAAGA CTTTTGCGGTATATGGTGTATCTTTTATCAACCTAAAATTATTTTTTCGG AAAATCTTTCTAAAAGCTTATTTGCTTCAAAATTATGAAAATAGTGCTTT TTGACCAACTTTCCATCCCAATTTTTCATAGAAAAACAACCATAACTTTT GATGCATTAATTTAGAAAAATTTTCCGAAAAATTTAAAACAGCTCAATTC TTTGCGGACAGTTTGAAAAAACTTCGAAACAACCATTAAAACTTAGCACT TTTTAGAAAAGAAGGGGCGCGTTCACACTGGAAAGTTTACTTAATTAAAT CTATCAAAGTTAAACAAAGAGATTTATGATGGATGAATACACTGGTTTAT TACAGTTTTTTGTAGGTTCACGAGATCTATTATAACACGGTAATTGATTT TGCTTAAGGCTTCTCATTGGTTGATTTTTTATTGAGAGTTTCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCGTTTGCACTATTTCTAATTTTTTCCTCAGTTCATTCGTTT TTGAAATCGTAAAACTTTTTGTTCACTGCACGCATTCTTTGTTTATGCTT CCTTAATAAAATATTTTGTTTTAAGGGAAGCCTCTACCCTACCCTTAAAA CAATAGAGCTTACGACTCTTAATTAAGGAAGATCGATTAAAAATTACAAT ACTACGCGTTCGACTCTTTGTTAAATGCACGTTCTGTATTGTAGTCAACA AAAGATTCTCCTAACTACATTTTTATTAAGGAAGGTCTGTAGTGTGAACA CGACCAAGGTGATGCAACATATTATTAACAACTTTTTAAAGTTCATAACG TCATTTTTGCAATTAAATCTTTAATTACACTTAAGGCATTTGATTAAAAA GCAATTTATAAAGGCAATTCTTTATTAAAAGTGTTAAAGAATCTAAAACA TAACTTTTATGTTCAAATACTAAAATCAATTTTCCAACAATGGTCAGAGC CCTTAATTCTACTTTATCATTCCAACAGGTAAGCTTCACCAGCAACAGCT ATGAACTCATCAGCTATCGGACTTCTCATCATCGTCATTGCATCCGATCA ATTATCTGTAATCCAAGGTTTCATATCAACCAATTTCGATCAATGCCGTC AAGATTACTTTTACAATGGAAGACCTCCTAGAAGCATTAAAAAAATTAAT AATGTTGATAATCTTGGAAATGATGCAGATACAGAAGAAATTTGTCAATC ATATGAAGGAATTAAATATTTTGCAACACTTTATGATAAGAAGTACAAGA TACCAAGATACTCCGCTTACCTCCTTGACCCGAATTCCAATAATGGTGGA CAACCAAGTAGACGGAGCACTTGGTTTATTGAACCAGATTTAGTTGAAAA AGATAAATTCAAAGATATGAGCACTTTAAGTGTATTTGGAAAAGCCAAAG AGAAGATGGAATTCGTTGCAAATTCTCAAGCAACGNAGTGTATTTGGAAA AGCCAAAGAGAAGATGGAATTTGTTGCAAATTCTCAAGCAACGGACGATG ATTATGAAGGATCTCTTTGGGACAAAGGCCACTTGAATCCAAACAATTTC CAGAATGGTGCAGGCAGAACGGCAACATTTACATTAACGAATGCGGTTCC TCAAGATTCTTGTTTGAATCGAAACTATTGGAAAGAAGCTGAAGACGAGG CCAAAAAATTATTGTTCCAACATTGCACTGATGGCAAAGCTTATTTTATT ACTGGTGCTGTCCCAGATGATGACAAAGCTATCTATGTTGATAATAAGCC AAAAATATCAATTCCTAAGTATATGTATTCTGCTGCTTGTTGTGATCACA ACACAGAGAAATGGAATAGTTTCTCATTTGCATTTGCTGCAGAAAATAAA GCTGGCGTGGCAGGAGTAGCAGTATTAAAGGTTTCGAGATTGTCAGAGAT GACCGGTATTGACTTTTTTGATAATGGGCAGTGCTATTCTCATTCGATTC CTACTATGTTGCATGTAGGTAAATTCAGCGAATGGAATAAAGTCAGTTTA AAGAAGCGAAAAGAAGAAGACACGAAATTGGAAGAACTTCAAAAGAAGTT TGAGGAGGACATTAACAAGGGCCATAACAATTGAAACAAAACAATGCTGA CATTACTAAAAATACACATTGTCGTAAATTATGTGAATAATAAACAAACA GAATAAACAGAATAACTTATTATATCTTTATATAATAAATGTCAAGAAGT TCTGCACATGTTTTTATTAGGAGTACCTTATCGGCAAAAACTTAGTCGAC CTTGAGTGACTAAATTTTGGCTTAGTGACTAAAATTAGGGCCGACTAAAA CTTTGGGCCGACTAAAATTAAGGCCGACTAAAAGTTTGGGCCAAATTAAA AGTTTATAATTAAGCTTTCCTTATTTTCCAGTATTTTAAGCTTTCTCCTA TTTTCCATCTGCTTGTAAATTTAGAAATGGCCCAAATTTTCAGTCGGTCT TAATTATTAGTCGGCCTATAGTGACTAAATTTTGACGAGGTGACTAAAAT TAGG

Coding sequence (CDS) from alignment at sc0000401:191869..200322-

>TCONS_00021991 ID=TCONS_00021991|Name=TCONS_00021991|organism=Clytia hemisphaerica|type=CDS|length=621bp|location=Sequence derived from alignment at sc0000401:191869..200322- (Clytia hemisphaerica)
ATGGAATTTGTTGCAAATTCTCAAGCAACGGACGATGATTATGAAGGATC
TCTTTGGGACAAAGGCCACTTGAATCCAAACAATTTCCAGAATGGTGCAG
GCAGAACGGCAACATTTACATTAACGAATGCGGTTCCTCAAGATTCTTGT
TTGAATCGAAACTATTGGAAAGAAGCTGAAGACGAGGCCAAAAAATTATT
GTTCCAACATTGCACTGATGGCAAAGCTTATTTTATTACTGGTGCTGTCC
CAGATGATGACAAAGCTATCTATGTTGATAATAAGCCAAAAATATCAATT
CCTAAGTATATGTATTCTGCTGCTTGTTGTGATCACAACACAGAGAAATG
GAATAGTTTCTCATTTGCATTTGCTGCAGAAAATAAAGCTGGCGTGGCAG
GAGTAGCAGTATTAAAGGTTTCGAGATTGTCAGAGATGACCGGTATTGAC
TTTTTTGATAATGGGCAGTGCTATTCTCATTCGATTCCTACTATGTTGCA
TGTAGGTAAATTCAGCGAATGGAATAAAGTCAGTTTAAAGAAGCGAAAAG
AAGAAGACACGAAATTGGAAGAACTTCAAAAGAAGTTTGAGGAGGACATT
AACAAGGGCCATAACAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012343XLOC_012343Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021991-proteinTCONS_00021991-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021991-exon-sc0000401-1575043694:200152..200322TCONS_00021991-exon-sc0000401-1575043694:200152..200322Clytia hemisphaericaexon
TCONS_00021991-exon-sc0000401-1575043694:191869..193394TCONS_00021991-exon-sc0000401-1575043694:191869..193394Clytia hemisphaericaexon
TCONS_00021991-exon-sc0000401-1510915933:200152..200322TCONS_00021991-exon-sc0000401-1510915933:200152..200322Clytia hemisphaericaexon
TCONS_00021991-exon-sc0000401-1510915933:191869..193394TCONS_00021991-exon-sc0000401-1510915933:191869..193394Clytia hemisphaericaexon
TCONS_00021991-exon-sc0000401-1491911889:200152..200322TCONS_00021991-exon-sc0000401-1491911889:200152..200322Clytia hemisphaericaexon
TCONS_00021991-exon-sc0000401-1491911889:191869..193394TCONS_00021991-exon-sc0000401-1491911889:191869..193394Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:191869..200322 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.981066 0.546321 0.44522 0.550509 1.2795 1.13937 18.6286 8.43833 0.60758 2.76011 3.15742e-10 1.62852 1.47097 0.414979 5.34657 9.41669 4.37078 4.77553 6.04272 8.32141 4.29847 0 1.62634 0 5.89049 5.88942 0 0.701683 0.757079 0.636773
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020821Extracellular_endonuc_su_A
IPR001604DNA/RNA_non-sp_Endonuclease
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021991 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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