TCONS_00021909 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021909
Unique NameTCONS_00021909
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021909 ID=TCONS_00021909|Name=TCONS_00021909|organism=Clytia hemisphaerica|type=transcript|length=149bp
ctctaattcgaatgattttaTTCTCTCTCTCTTTCACTAGTTTGAATGGT
TCTTTTTGTCAATTGACCACTCCTTCTAATTCGAACACTTAGAAtgaagg
tttccgcattacagaatagcatATAGGAACACTTAGAATGAAGGTTTTC
Run BLAST on NCBI

transcript from alignment at sc0000396:271986..272134

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021909 ID=TCONS_00021909|Name=TCONS_00021909|organism=Clytia hemisphaerica|type=transcript|length=149bp|location=Sequence derived from alignment at sc0000396:271986..272134 (Clytia hemisphaerica)
GAAAACCTTCATTCTAAGTGTTCCTATatgctattctgtaatgcggaaac
cttcaTTCTAAGTGTTCGAATTAGAAGGAGTGGTCAATTGACAAAAAGAA
CCATTCAAACTAGTGAAAGAGAGAGAGAAtaaaatcattcgaattagag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012296XLOC_012296Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021909-exon-sc0000396-1491911889:271986..272134TCONS_00021909-exon-sc0000396-1491911889:271986..272134Clytia hemisphaericaexon
TCONS_00021909-exon-sc0000396-1510915933:271986..272134TCONS_00021909-exon-sc0000396-1510915933:271986..272134Clytia hemisphaericaexon
TCONS_00021909-exon-sc0000396-1575043694:271986..272134TCONS_00021909-exon-sc0000396-1575043694:271986..272134Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000396supercontigsc0000396:271986..272134 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021909 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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