TCONS_00021727 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021727
Unique NameTCONS_00021727
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1614

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021727 ID=TCONS_00021727|Name=TCONS_00021727|organism=Clytia hemisphaerica|type=transcript|length=1614bp
GGGGAAATGAGCACGTGGTGTCTTGttatatttcaaaatgatgtCAATAA
AAATAGTGCCAAGAACAATGAAAAATCGACGTGAATTTCGAACATTAGCA
CGTGATAATTGTGGTGAATCAATGGAACCTGGTGAAAATGAAATCATGTA
TTTTGGTTACCCAGCATCAgatgaaaaacaaaaagGTCTACCAATTGCGT
GTGCTAGTTTGTTACCCTGCAATACGAAATGCAACGATTATCAACAACGA
GATTATTATCACTGGATTACTTATATTTTCGTACACGAACGTTTCAAAGG
CGAGGGGTTTGGGACACAGCTATTACGTCATGTTCAATATGATGCTTGGC
TAAATTCTAAGCATCCAATAAGAGCTGATGTTGCGCATAAAGCGGTACCG
TTTTTTGAGAAGAATGGTTATTTTGTTTTTGGTGATGTATGGAGCCCTGC
AGCTGGGAATAGATATTTTCGTCGATTGCACCCGATGCAGCTGGACTTTC
GAATAGTTGAGAAGGAAGAATTATGGGATTCTTGATTTGATGAACGAAAA
GATAACCAAGGAAAGTGAAAGGGAGTGAAGAGTTTTTTTGTGACTTCCAA
CGGAGAAGAAGGAAATGTTTTGATTGCCATACTTCGTGACAATCTTCCGA
CATTAAATATCATGTCTTTTCCCAAATTATATTGTATCTTCAATGTGAGA
AAAAAGTGATCGGTGATCGAATGTCTCAGCTTAGAGTGATTTATCAATCA
TTACAAAATGGTTACAAGAGGAGAAATAATAGCACCATTGAAGAGAGATT
ATGATGAAAATGGAGTAAACAACTGGTAACAATTTTTCAACATTACTTCC
ATTCTGTGCCTACACCAATTCGTAACAATTGACAATTTCTTAAAGACAAT
GTCATGCTCAATAATTAAAAGCCCCAGCATCAATgccaaaattgaaaaga
aaatatttattacaTACTTTTACTACCTTAAGTGAGATAATTTTGGCGGA
AATTAGATTTGGcgaatttgtcaaaatttaacACAATTAaagccaaatta
aatccctgtaaaaatttcaaaaaccgaTCTATCGCTAAATTAAATCTCCG
CCAAATTTAACGAAAAGAATATTTAGCATATTTCatagtaattttcaccc
atttcaataTCACAAAGTTttcaattcgccaaattaatccccgccaaatt
ttacgaGGTTTGCCTAGCActtattttgatttgttttgcacattgtgtcT
TCAGGGAAATAAGATATgcaatcaaactacactgtaagggcggcgagaaa
cgttcggtaaaatacacgtgtaagggtaccttttcactgcttAAGAGCTG
CACTACTGtaaaaatctaattttgaaagccaatttttggtaggctgcacg
catcccctctgatatgatttgatataggggatgcgtatatTTCCTGTCCC
agcttacccccgtcttttcttttctcttttttgattATGTGTCACACCTG
TACAACGacttctctttttctttgtttaacctttccagcgcgcaactttt
taaattttcacgctgtcagcgcgcaacattttttcagaaaatagacatgt
tcagttatttgATC
Run BLAST on NCBI

protein sequence of TCONS_00021727-protein

>TCONS_00021727-protein ID=TCONS_00021727-protein|Name=TCONS_00021727-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MMSIKIVPRTMKNRREFRTLARDNCGESMEPGENEIMYFGYPASDEKQKG
LPIACASLLPCNTKCNDYQQRDYYHWITYIFVHERFKGEGFGTQLLRHVQ
YDAWLNSKHPIRADVAHKAVPFFEKNGYFVFGDVWSPAAGNRYFRRLHPM
QLDFRIVEKEELWDS
Run BLAST on NCBI

transcript from alignment at sc0000393:109621..121792-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021727 ID=TCONS_00021727|Name=TCONS_00021727|organism=Clytia hemisphaerica|type=transcript|length=12172bp|location=Sequence derived from alignment at sc0000393:109621..121792- (Clytia hemisphaerica)
GGGGAAATGAGCACGTGGTGTCTTGGTGAGTTTTCAGAGCCTCTTTGCTC CACATTTCTGTTTTATTTTTTTTAGTTATCATATTATAGATTGATTTGTG AGAAGTATTTTTACTTGCAATATCATGCCCTTGCAAACAATGGGCTATTC CATTTTTAAACCATACAGGGGTATTGACGAACTTTTCCAGGGGGGTCTGA GCCTTAATTTTCCAAGGGGCTTTTGGTCATTTTCAGATTTTCCAAGGGGG TTATCAAAGGTTTCCAGGGGGTTCTCTCCTCCTAAACTGGCATCAATAGT CACTTTCCAGGCCCTTTTTCACAAAATTTCACTTTCCAGGGGTGTCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTAATTTCCAGGGGA TAGTTTGTTATCCAAAATTTCCAGGGGGGTTAGTGAAAAAAGTTCGTCAA TACCCCTGTACAATTTTTTTTTGGAATAGCCCAATGCTCTCAGTACAACA ACCGCTGGTAATAAACCAGACGTCCGCGCTCGATAGGATCGATCATCGGA ACGGCTTGATGACGGATCGATATGTGATTGATGGATTACTGGATAGGAGA TCGATAGAGGATCGATACTCAAGATTTTTTTAAGCTTGTGATTACTTATC GATTATAGACCTTTTTTCAAAAAGAGGCCACCCTGTCAGTCAGGCACCAC ATCCTGGCAAATGAGCGGGGTATTTTTCACTTGCGACCACTTGCGACCAT TGGCAAATGAACGGGGTCGAAAACGAAAGTGACGTAATAGCGCCGGACAC CCAGTTTAATTGAACCGGGTTGGAAATATTTTGCTTCATTTCAAAGAACT GCATAGATGAAATTTTTTTTCCATGGGTCAATTTTGTCTTTGAAGATTGA AGAAACTTTTAACGAAAAAATAAAGTTCCTAGTTTTCTTCCTTTTTTCCC TTTTTCAGTTTGAAGTTCATTTTTATTCATTTTCAACATTTTAGCCTGAG ACGTCCTATCTCATTTACACTGGGTGACGAATACCCCATGCAAATGCTCA CCCCGTTCATTTGCCAGGATGTGCCTGACTGCCTGTTGAGTAATTATGTA GTCCAGCAGAAAAACAATGATAAAACCATGCATAATTATTACAATATGCA TGATACAGTAAGTATGCATGGCTCTATCATTGTTTTTATGGCTGGACTAC ATAATTATTCAACAGGACATCCTCTTTGAAAAAAGGTCTATTTATCGATA TCATCGATCTTGTTTTATCAATCTTATCGACCCTATCGACTCATACTCGA TTTACGATCGATAACAAATCGATTAACGATCAATGACGAATCGATTAACG ATTGATGACGAATCGATTAACGATTGATGACGAATCGATATGCTCGATTG AAATACTAGCTTGATAATGGATCAACGAAGGATCGATACTCAAGACTTTT TAATGGCTGAATCTTCCATCGATCTCCTATCCGGATCGTTAAGTAATACA TTGATCATATATCGATCCGTCATCGAGCCGTTCCGATGATCGATCCTATC GAGCGCGGATGTCTGGAATAAAAAAGTCATTGTCATTTTCCAGGCCCTTC AGTTAGGAACATTTGGCGAGTTCCTGTAGCTGTACACGGCCGGCCGCAAT CAAAAAAATCATAACGTCACTCAATAAAAAATGGCGTTCGTGTCTTTTCC CACTTTTTTTAGCCTAGATGATGTAGCCAACATAGTAAGTATAAGCACAC TGTGCTTATAATTGGCTGACAATTTCTTCCTCTGAGGACAAGGTTGGGTT TTCCAATCGGAAGGCACTGCATTGCAAAACGTTCGAAAATTGTCAATCGA ATTTTGTTTTTAAAACGCAGAACACAATTACGTCAAAAAAGAAAGAAAAA TAACACAAAAATCAAATCAAAACAAAAAAAATTACAAGTGAAAAAAATAA AGTGAGATAGGGACGTGATGATCAAACTGATTAAAAAAGTTTTCTTGTTA TATATCTATCCTGGCTGATCCGAAATATGGGATCTATCAACAGAAGAATA GCTACTGTAAAGCTGTTTTTTTTTTCGAGTGCAGTCAGTTGCTGAAATTC AGAAGTTCTGCTGTGCTGCTAGTGCTAGACAAAAATATTTAGCTGGATAT TTTGTTGTGGTTTGAAGAATAAATTAAGACAGAGACTTTGAGAAAGTCTA GATCTTTGATGAGGGTGAATACTTCTAATGACACCCATAGCCAGACGATC TCAATCGAACGGAATCGACGATCGAACCAATCGAACCAAATCGAACGCAA TTGACCGATTGAAATTCGATTGTCGAACGCAATCGAATCTCAATCGAACG TCAAAATTCTGGGTAATATTCGATTGGTTTGATTGTTGTTCGACTGGTTC GATCGTCGATTCCGTTCGATTGAGATTGTCTGGCTTTATTCTTGCAGCTT CCCAACATCCAAGCTCTCAAACATCACAAGAAAGAAAAATAACACAAAAA TCGAATCAAAACAAAAAGAATTACGAGTGAAAAAAATAAAGTGAGATAGG GACGTGATGATCAAACTGATTAAAAAAGTTTTCTTGTTATATATCTATCC TGGCTGATCCGAAATATGGGATCNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTCGAGTGC AGTCAGTTGCTGAAATTCAGAAGTTCTGCTGTGCTGCTAGTGCTAGACAA AAATATTTAGCTGGATATTTTGTTGTGGTTTGAAGAATAAATTAAGACAG AGACTTTGAGAAAGTCTAAATCTTTGATGAGGGTGAATACTTCTAATGAC ACCCATAGCCAGACGATCTCAATCGAACGGAATCGACGATCGAAGCAATC GAACCAAATCGAACGCAATCGACCGATTGAAATTCGATTGTCGAACGCAA TCAAATCTCAATCGAACGTCAAAATTCTGGGTAATATTCGATTGGTTCGA TTGTTGTTCGACTGGTTCGATCATCGATTCCGTTCGATTGAGATTGTCTG GCTTTATTCTTGCAGCTTCCCAACATCCAAGCTCTCAAACATCGCAAGCT GAATGAAATTACGTTCGATTTCCCGTAGAAATTATGCGATGAACAATCCG GGGGTCAATTAATTGACGATCGAACGCAATCGAATGCAATCTAACATCAA TCGAATGCAATCGAATATCAATCGAATCTGAAAATTGCGGTAATATTCGA TTGAGATTCGATTGCGTTCGACAATCGAATTTCAATTGGTCGATTGCGTT CGATTTGGTTCGACTGGTTCCATCGTCGATTCCGTTCGATTGAGTCTGGC CATAGCCCTGATGCAAATGTTTCACTCGATCCAAATACTCAAAATTTGCT GGACCTGGAGGAGTTGGAGAGGAAATGTTTTAGATTGGATTAACTTATTA CACTTGACACTACAGTATATACAGTTTGCGATAAAAAAGTTAGAATATTT ACTTCCAGTAATAGTGATCCATTCTTGGCTTGTTTGCTGTGTGTGTCAGG AACGATGAAGTCTTGCAAAAAAGGGTAAGTCGTTTAATATTTTAAAATTA CAGCTGGCATGAATGAATAAAATCGTCCAGCTTTTTTTATCCCAAATGGA ATGAAACTTTTCTCCGTTTGAAGAATTTCTATGGGCCCTATTCCTCACCA ACCTTTTGAAGGTACAGTCTGTTTATCGCAACAACTCATGCTAAATTTAA AATCCAATGAGTGTGTTCCATCTTGCTTCATAATAAAACTGTTTCTTTAA ACTTATGCTGTTCATTTTTGAAAATGAAAAATAGGGATGGTTCACTCTTC ATCCTTGAAAGATCATCTGGAGAATTTTTTTATGAAGAGAAGGAGTATAA AACGTTAAAAAAATTTCTCGTTTGTGGTTTAAAAGAGCCTGGTATCTCAG GGTCTTTTGTCTTCATCATAAAGTATGAAAATGTTATCAAAAGGGACTGA AAAATTGCCCTCGCTGATCTGACCTGTACGTCAGTTAGGTACAATTGCAA GGAAAATCTAGTTAAGTTAGCAAGCTTCCGCCTTATCATTTCTCACAATT TTTCTGAAAAAGCAAATCAGACATGATCCGCAACCTCCTCTAAGCCAAAC GAAGCCAAACGGTGAAATATATCTACTTTACGAGCGTTTTTCTACAAGAT CTTGTATTAAAAAAAAAAACTTCGTCTTCACAGCTCGAATTTATTCGCGC TGTGATACTCACGGTATAACTTCTAGGGGATAGTTTTTTATCCAAAATTT CAAGGGGGGTTAGTGAAAAAGTTTGTCGATAGACTTTTTCGCCTTTTCAT TCGCCATCTTGAATTGTATGCAAAAATACAGGAACAAAAAAGCCGTGGTT GGATTTAGTTGGAAATTATATGCAAGTTCAGTTAGGAACATTTGGCAAGT TCCTGTCAGTATAGACCTAACTCTTCATACAAAAATTACGGGAAACGCAT GTTTGGACTTTATACCCTATGCTGCACGCAATGCAAGCACTTAAGCCAAA GTCCTGCAAAGGTGGGACAAAAATCAGTTTTTTGAAGTTTGCAAAAAAAC GCCACATAGAAGATCTTTCAATTTCAGTATGTGAATAGAGCAGTAAAAAA TACAATTTTTCTATTTTTCCTTTTTTTTGCAAAAGTTCTAGGCTGGAATG AAAATAAAGGGATAATGATTATTTAATACTATCCATTGATGATCCGCGGC AATATCGTAAAGCTAGAATCGCTTTGCGTACTCTTCGCTTGAGAAAAGGA TTGACAGATTGAAGTATTTCACCCGCGTGGGCGTTCTGCGAGCGTTCTCG GCTCAATCCTCGGACTGCGTTAAAAATGGTAGACTGAGCTGTGATAAGAT CATTTTGATGAAAGTTGTTGGAATGTTTACAAGGCTCTTGACAGAAAATC GTTTGTTTTATTGTCAATGATGACAGTGCGGTTATTAATTTTGTTANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNATCTGACAAATTGATGTTTNTAAGTGC AATTTATAGTTTTGATTCCCATTGAAGAATCATATTCTGGTTTTCATGTT ATTAGATGCTGTTTTAGAGCTTTAGAGCTAGCCTGCCTGTACGCGACGGC GATCAAAAAAATCAAAACCATACTCATAAAAAAATAAATTTAGTGTCTTT TTTTATCGTTTTTTGCCTAGACGATATAGCAAATATAGTAAGTATAAGTA GACTGTGCCTTTAATTGGCTGTAAAAAAATTCTGCATTGGTAGAAATTTC TCCAACTTTTAACAATAATAGAACACACCTATTTAAACAAAATTAGCCAG CGCATTTTCTATCTTTCTACTTCTTCATCTTCAATGAAGCACTCAAAGTC AAATAGAATTAAGCACATTAGATATTCTTATAACCGTGAAATACCGTTTG CGCTTTCGCTACGGTGAAGTGCATGACGTAACTCGCGCTGCAACAAACTC GCCTTCTGTTGACTGATCATATTGGGCGTTTTGGCGTTACTACCCTTGAA GCAGCGGTTGCCTTTATCATTCCGCAACTCCGTCCACCATTTTAAATGAG TTAACAATAGATCCAAAAGGGCGCCCTCATCAACTCGGGCAAGTTAAGGC CTGTGCAAAAAATTAACGAATCAAATAATGCGTGACGGCTAGTTGTTCCA CCCCTTTTCGGGAAAGATTTTTGGTTTTTCTCACTCGTAATATTAATGCC TTTTTAAAAAGTCCTGGGCCAAAAATTGTGTTTCAGCCATTTTGGTAAAA TTTAGGAAAAACACTTTTTGCTGACGTCAGCAAAAATTTAAACTGCTAAT AACTCCAGGAATATTTATCCAAATGAGCTCAAATTTGGTACGAAGGTAGG GTTTATAAATATCTCTTGTTTCCAAAAAAAAAATTCTCAAAATGCTGATG TCATCAATTTTTAGGAAAAGTTTTTTTTGGAAATGAAAGATATTCATGAA CCCTACCTATGTACAAAATTTGGGCTCATTTCGATAAAAATTCCAGGAAT TATTGGCATTTTAAGTTTTGACGTCAAAAATATCCGTCATTTTCATGGCA ACCAACACAAAAATCCAACAAATCATAAAACTCGTGACGGCCAATTGTTC CACCCCTTTTCTGGAAGAAATTTTTACTGAGTTATGTTCCTTATATTAAT ACCTTTCCAAAAAGTCCTGGGCCAAAAATTCTGTTTCAGCCATTTTGCGA AAATTAAGGAAAAACACTTTTTGCTGGCGTCAGCAAAAATTTAAATTGCT AATAACTCCTGGAATATTTATCCAAATGAACTGAAATTTGGTACGAAGGT AGAGTTTATAAATATAATTTATTTCCGAAAGAAAATTGTTCAAAAAATTG ATGACGTCAGCATTTATTAAGGAAAAACGAAAATTGCTGATTTTTGCTGA CGTCATGAATTTTTTGAAAATTTTTCTTTGGGAAATGAAAGACATTTATC CACCCTACCCTCGTACAAAATTTGAGCTCATTTCAATAAATATTCCAGGA GATATTAGTATTTCAAATTTTTGCTGACGTCAGCAAAAAGTGTTTTGCCT TAAATATCCCAAAATGGCTGAAACAGAATTTTTGGCCCAGGTCTTTTTGG AAATGTATTAGTATGAAGAGTCAAAATAACGAAAAATTTTCCCATAAAAA GGGGTGGAACAACTGGCCGTCACGGCCGTCGCGATTTATCGAATTTTTTG CACATTCTGANACAAAAAACTGGCCGTCACGATTTATCGAATTTTTTGCA CAGGCCTTAACTTGCCTGAGAAGGAATATAATTTGCTTTGGTCTCCGGCT TTAGGAAGCAGTAATGTTTTTGGTTGTTTTCGATGGAAAATTGTAAGAAA CTTAAGTTTACAAGTAACATTAAGTGATAGAATAGCAGAATCATGGATGG TTTCCCTAGCTGAAGTTTACACAAAGATTAAAAAGACAACAAAGCATCTT ATAAAGAAATATTATTATAATCATTAGAACAATAAAAAATTTCTTAATCC AAAAAGAAATATTTACAGAACAACAAAAGACATATTCTGTTTTCATGCCA TTTAAAAATTCCATGAAGACAAGACAGAGTTCACACATTAAACTTTCAAA ATACGCAAACTGAAAGCAGAAATGATGACGTCACACATTCTTTCCCGTGC AATAAAATATTAAAACCCCCATTAAGGTCAAGCGCAACATGTTAGTAAAA GCAGCTGTAAATCAGGGGGTTCAGATTAAAATGTTTTGATTTGATCATTT GGTGGTTCTATTACCATTTTTGTACCTTCGCTGGTGATTTTTCATCTTGA GTTTATATCTAATGTCAATTTAATCTAATGTCATGGTTTTTTGAAGTGCT TGTTCTAAGAGATGAGTGAATGTGATTATTTCTAGTAAGTTTTATATTAA TACTTTCTTTTTGCATAGGTTTTGCATATTTTCAATGCAAGCTCACCACG GCAATTTGTCCACTATAATTAAATTCAATATGGTGGATGGAAAGGTCAAA AGGTCTATACCCTGTACAATTTTTACGCGAGCGAATGAAGCCAGGGAATT GAATCAATTGACCATAATCGAATACAATCAAATGTAATCGAAGCAATTAA ACAGCAAATCCTGGTTAATATTTGATTACGATTTTGCTCAATTGATTCGG CATTCGATTTGTTTGATTAACATTGTCTGGACAGTTGGCATTGAATCTAT CAGCTGTCTACGTTCACTTTCAGAATAATATTTTTAATAGCTTTTTGATT TGGTAAAAAGACACTATCATTGTATTGTTTCAGCTGTTTCAGACCATACT CCCTAGTTGAAAGCAAATATTAAAATCATTATCTAAGTCAAAGTGAGGTA ACGTAAAAAGATTACTTGAAGAATCTTTTTGGTATAAGCTTCAAGGAATA ACTGATACCCGTTTCTTTATAGTAGGGGGAATTTTGTTCGATTTTTTTAA ATCGCTCGATTGTTTTGTTAGAAGCACTTGTTCTACATTTTTGGAAAGCT AAGGGGTAGGGGAATCAAAATTATGATGTTTCCAATTTTTTTTCGGACAC TTTGGTGTGATTTTCGGACAAATATGACGGTCTCAGGGAGAAAAAAATTG GAAACATCGTAATTTTGATTCCCCTACCCCTTAGCTTTCCAAAAATGTAT AACAAGTGCTTCCAACAAAACAATCGAGTGATTTTACAAAATGCCCTCTA CTATTTACAAGAACAAGATATATAAGAGCATATGGCTTCGATCGCCAAAA TATAAAGAACAAGTTAAGAATATTTTGAGGCTTTATGGACACTAAAACAC TCCAATGTCCTAGGAAATTGCACAAAAATACTTACAAAATAGTGAAATCA AGAACATTTTTCTAAGGCTTAAAACTCAAAAAGTTAAGGACATCTGAAGG CTCCAAAAGTTTTGGGTGCTTATGAAAGACTTACATTTTAGTTATTTTCA TTATACATATAGCATTGACTAATTTTGTCTTATTATTTTAATAGTTATAT TTCAAAATGATGTCAATAAAAATAGTGCCAAGAACAATGAAAAATCGACG TGAATTTCGAACATTAGCACGTGATAATTGTGGTGAATCAATGGAACCTG GTGAAAATGAAATCATGTATTTTGGTTACCCAGCATCAGATGAAAAACAA AAAGGTATTGGAAATAAAATTGAATAAAAATTGAATAATAATCATCACTG AATTATCGAATTGTTAAAATTTTAGAAAAAAGTTTCTCCTACGATTTCTT AGAATTGAAGAAATATCGTCACTTTTTCAACATATCCTTAGGTGTCAAAT TTGATAGTCCCGGAACCCATATTCCGGTTGTCCACAGTGAGAGTGAGGCT CTTTAGAGCGCAATGTTGCTCGTTTTTCAAAGTTTTTTAAATGAATATCT ATTTACTTCAAAGATCTCTAGGCTTGAGTCCTACCCAGTCCGGCGCTACG GCATGGGGTCCCGTAAGGTTTTCGACTCCACCCCCGTAGGGCCTTTCCGT AAACTTTTCAGGACTTCAAACCAAATTGCAAACGACGCATATGTAAAATA TTGTTGTTTAAGCATATGTTATTCTAATAAGCGAGCGGTCATTAGGGTGC AAATAGAGGAAATTGTGTAGTTTATTTAGTTTGAAGAGTATATAACTTAT GAATAGGCGTTGTGTTACTTTAATGGGATAAATTTTCGCGGGGATTAAAT TTCGCGGTTGAACTCATCCGCGAAATTTTAAGATTTCGCGGGGATTAATT TTCGCGGATGAGGGATTTCCTGATTTTTCGCGGGGATTTAATTTCGCGGA TTGGGGTACAAATTAAAATTTTTGAAAAGGGTCAAAACATTGAAATAAAA TTTTTCTAGGAAAATTAAGAATTTTTTTTTTTAAGTAATAAGAGGGTGTT TTGGAATAGGGCGAGGAGATATGTATTACAACTATCAAAAGTTGAATTTG AACTTCCATGGTGCGGAGCTAAATTTTCACAGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGAGGGTTGCGT GCCCTCATGTAGAAAAAAAATAAAAAACGATAAAAATAGAAATTTTGCGG ATTGCAAAAAAAATTCAAATTTTTCGCGGAAACTAATTTTCGCCCAAATC CGCGAAATCCGCGAAAATTAATCCCCGCGAAAATTTATCCCATTAAAGTA TTAATTCTTTACGAGCTTCTTTTATTTGCTCTTCATATTTAAGGTCTACC AATTGCGTGTGCTAGTTTGTTACCCTGCAATACGAAATGCAACGATTATC AACAACGAGATTATTATCACTGGATTACTTATATTTTCGTACACGAACGT TTCAAAGGCGAGGGGTTTGGGACACAGCTATTACGTCATGTTCAATATGA TGCTTGGCTAAATTCTAAGCATCCAATAAGAGCTGATGTTGCGCATAAAG CGGTACCGTTTTTTGAGAAGAATGGTTATTTTGTTTTTGGTGATGTATGG AGCCCTGCAGCTGGGAATAGATATTTTCGTCGATTGCACCCGATGCAGCT GGACTTTCGAATAGTTGAGAAGGAAGAATTATGGGATTCTTGATTTGATG AACGAAAAGATAACCAAGGAAAGTGAAAGGGAGTGAAGAGTTTTTTTGTG ACTTCCAACGGAGAAGAAGGAAATGTTTTGATTGCCATACTTCGTGACAA TCTTCCGACATTAAATATCATGTCTTTTCCCAAATTATATTGTATCTTCA ATGTGAGAAAAAAGTGATCGGTGATCGAATGTCTCAGCTTAGAGTGATTT ATCAATCATTACAAAATGGTTACAAGAGGAGAAATAATAGCACCATTGAA GAGAGATTATGATGAAAATGGAGTAAACAACTGGTAACAATTTTTCAACA TTACTTCCATTCTGTGCCTACACCAATTCGTAACAATTGACAATTTCTTA AAGACAATGTCATGCTCAATAATTAAAAGCCCCAGCATCAATGCCAAAAT TGAAAAGAAAATATTTATTACATACTTTTACTACCTTAAGTGAGATAATT TTGGCGGAAATTAGATTTGGCGAATTTGTCAAAATTTAACACAATTAAAG CCAAATTAAATCCCTGTAAAAATTTCAAAAACCGATCTATCGCTAAATTA AATCTCCGCCAAATTTAACGAAAAGAATATTTAGCATATTTCATAGTAAT TTTCACCCATTTCAATATCACAAAGTTTTCAATTCGCCAAATTAATCCCC GCCAAATTTTACGAGGTTTGCCTAGCACTTATTTTGATTTGTTTTGCACA TTGTGTCTTCAGGGAAATAAGATATGCAATCAAACTACACTGTAAGGGCG GCGAGAAACGTTCGGTAAAATACACGTGTAAGGGTACCTTTTCACTGCTT AAGAGCTGCACTACTGTAAAAATCTAATTTTGAAAGCCAATTTTTGGTAG GCTGCACGCATCCCCTCTGATATGATTTGATATAGGGGATGCGTATATTT CCTGTCCCAGCTTACCCCCGTCTTTTCTTTTCTCTTTTTTGATTATGTGT CACACCTGTACAACGACTTCTCTTTTTCTTTGTTTAACCTTTCCAGCGCG CAACTTTTTAAATTTTCACGCTGTCAGCGCGCAACATTTTTTCAGAAAAT AGACATGTTCAGTTATTTGATC

Coding sequence (CDS) from alignment at sc0000393:109621..121792-

>TCONS_00021727 ID=TCONS_00021727|Name=TCONS_00021727|organism=Clytia hemisphaerica|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000393:109621..121792- (Clytia hemisphaerica)
GTCTACCAATTGCGTGTGCTAGTTTGTTACCCTGCAATACGAAATGCAAC
GATTATCAACAACGAGATTATTATCACTGGATTACTTATATTTTCGTACA
CGAACGTTTCAAAGGCGAGGGGTTTGGGACACAGCTATTACGTCATGTTC
AATATGATGCTTGGCTAAATTCTAAGCATCCAATAAGAGCTGATGTTGCG
CATAAAGCGGTACCGTTTTTTGAGAAGAATGGTTATTTTGTTTTTGGTGA
TGTATGGAGCCCTGCAGCTGGGAATAGATATTTTCGTCGATTGCACCCGA
TGCAGCTGGACTTTCGAATAGTTGAGAAGGAAGAATTATGGGATTCTTGA
ATGATGTCAATAAAAATAGTGCCAAGAACAATGAAAAATCGACGTGAATT
TCGAACATTAGCACGTGATAATTGTGGTGAATCAATGGAACCTGGTGAAA
ATGAAATCATGTATTTTGGTTACCCAGCATCAGATGAAAAACAAAAAGGT
CTACCAATTGCGTGTGCTAGTTTGTTACCCTGCAATACGAAATGCAACGA
TTATCAACAACGAGATTATTATCACTGGATTACTTATATTTTCGTACACG
AACGTTTCAAAGGCGAGGGGTTTGGGACACAGCTATTACGTCATGTTCAA
TATGATGCTTGGCTAAATTCTAAGCATCCAATAAGAGCTGATGTTGCGCA
TAAAGCGGTACCGTTTTTTGAGAAGAATGGTTATTTTGTTTTTGGTGATG
TATGGAGCCCTGCAGCTGGGAATAGATATTTTCGTCGATTGCACCCGATG
CAGCTGGACTTTCGAATAGTTGAGAAGGAAGAATTATGGGATTCTTGAAT
GATGTCAATAAAAATAGTGCCAAGAACAATGAAAAATCGACGTGAATTTC
GAACATTAGCACGTGATAATTGTGGTGAATCAATGGAACCTGGTGAAAAT
GAAATCATGTATTTTGGTTACCCAGCATCAGATGAAAAACAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012189XLOC_012189Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021727-proteinTCONS_00021727-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021727-exon-sc0000393-1575043694:121768..121792TCONS_00021727-exon-sc0000393-1575043694:121768..121792Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1575043694:112289..112448TCONS_00021727-exon-sc0000393-1575043694:112289..112448Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1575043694:109621..111049TCONS_00021727-exon-sc0000393-1575043694:109621..111049Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1510915933:121768..121792TCONS_00021727-exon-sc0000393-1510915933:121768..121792Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1510915933:112289..112448TCONS_00021727-exon-sc0000393-1510915933:112289..112448Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1510915933:109621..111049TCONS_00021727-exon-sc0000393-1510915933:109621..111049Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1491911889:121768..121792TCONS_00021727-exon-sc0000393-1491911889:121768..121792Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1491911889:112289..112448TCONS_00021727-exon-sc0000393-1491911889:112289..112448Clytia hemisphaericaexon
TCONS_00021727-exon-sc0000393-1491911889:109621..111049TCONS_00021727-exon-sc0000393-1491911889:109621..111049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:109621..121792 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.80086 1.93579 0.859997 0.342326 2.15272 2.21956 1.88508 2.111 1.00061 1.34099 1.4006 0.531155 0.717407 0.975355 0.82866 0.97118 1.52802 1.11242 0.235967 0.557312 0.845974 0.874678 2.21863 1.9436 1.52866 1.51226 0.545902 0.311319 1.2645 1.34995
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008080 N-acetyltransferase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021727 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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