TCONS_00021116 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021116
Unique NameTCONS_00021116
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1829

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021116 ID=TCONS_00021116|Name=TCONS_00021116|organism=Clytia hemisphaerica|type=transcript|length=1829bp
caGGTATTCTTATGATTGTTTCATGGGTTATTTTTGCAACCATTGGTATT
TTCATGGCTCGCTACATGAAACAAGCAACCAAAGATCAAAAGATCAATGG
AAAACAAGCGTGGTTCCCAaTTCATCAAATGTTTATGTTATTGTGTGTCA
TCTGTTTTCTGATTGGTTTCATCTTGATCTTTGTGGAAAAAGCAGGCTGG
GTCGAATCGGCAGGAACACACGGACAACTTGGGCTGGTTGTCGTTATTCT
AGGATTAATACagCCACTGATGGCAATGGTCAGATGTGCACCAGATAGTG
AAAAgCGTTTCATTTTCAACTGGTTCCATCGAACTTTTGGAATGTCAGCA
TGGATTATCGGAGGTGTATGTATCATATTTGCATTCGATAAGATTTTACA
AGAAAGTTACACAGAGATGTTGGTATTCATGATAGTAGTCGTTGTTTTGT
TCATTTTATTGGACATCGTTATTTGTGCTTCCTCGAAGAATTCCGCCTCA
GCTGATGTTGCCTATCGAGCCAAGAGTGATTCAGTTGATGTTCAAAATAC
GTCGTCTGCCAGTAACACGACGATTCCAACCATCTTCTGTGTGGTGGTTG
CATTATTTGCGGCAGCCATGGGTATTTATCATGTTTATATAATTGGTACT
TACAATGATGGTAATTGATAACTACACTTAAAGAAAGGTAATAGGTATTG
TTTAAAATACCTTAACCTAAAGAATGTTGCTTGCAGCTGAACAGGAGTTC
GGAAATAAATACAATCTTTTAGAGGTTGGTTATTTTAGACCATGACTCTG
TTTTAGTCCCACTGGAAACTGGTTAGTTCGAAGCattcttattttttagc
aaaataGACTTTTTCTCTTGATTTTCAAGTGAATTTGAACTCATTTTAGC
CTTTaacgattttttttatataagaccAATATCAttttttgcttactcat
caattttttaaaatcacATTGAATTCACACATTGAGTATTATTGGTCAGA
AGGAAGAaaagaagaacaattttttgcttattCAGCACGGACTCGAACAT
AATAGGTGACACCAGTTATAATATGAGATTTGTGTCcgatatgaaatggg
aacacttatgtGAAACTCGCCTTTTTGTTTCATTATTCATTCCGCATACA
GTATCTAGAAAATTGTTTAAGACATCCCCTACAAACTtgattttcatttg
atttgacattttggttattttctACAAACTCTTCCTCGCCTCTATCATAA
TGTTTGTTTGTGTCGAATCTCCAAAACATACCAAACAGAATAGAcgagca
aactagtctgttaattaatcatgccagagggcgggaacataaaggtggcg
ggcgtttgctagaatagaaGATGTGTAGGAGAACGatcaaaagttggtga
gaggctgctgattaacagcccttgccgccgacaaaatttcttcctacgct
cacctaactcctacgctcacttttcccgcgtgataccgttcctgCCCGAC
TGGTGTGCCATAGATAGAAATTGAAAAGGTTAAAAGTTCATCCCACATCG
GAGTAATAATAGTGATGTCATTATAGATCAAGAATAAACTTAAGCTTGCA
TTAGTGAAGTTTTTAGATCAAGCGTGTTTAGATGCTTATTAAAGAAAGGG
AGTGCCCAAATTGGTTAATCctatattttgatattatcaTCATATACATT
CTGCATTTCATATACATTTTTCATATACATTTTcatattcattttttata
taCATTTCATACACATTTTATACTACTTTTACAGTCTGTACTGTTTTGGT
AATTATCTAAAAAGACAATAAATCCAGCC
Run BLAST on NCBI

protein sequence of TCONS_00021116-protein

>TCONS_00021116-protein ID=TCONS_00021116-protein|Name=TCONS_00021116-protein|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
GILMIVSWVIFATIGIFMARYMKQATKDQKINGKQAWFPIHQMFMLLCVI
CFLIGFILIFVEKAGWVESAGTHGQLGLVVVILGLIQPLMAMVRCAPDSE
KRFIFNWFHRTFGMSAWIIGGVCIIFAFDKILQESYTEMLVFMIVVVVLF
ILLDIVICASSKNSASADVAYRAKSDSVDVQNTSSASNTTIPTIFCVVVA
LFAAAMGIYHVYIIGTYNDGN
Run BLAST on NCBI

transcript from alignment at sc0000378:41511..46685-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021116 ID=TCONS_00021116|Name=TCONS_00021116|organism=Clytia hemisphaerica|type=transcript|length=5175bp|location=Sequence derived from alignment at sc0000378:41511..46685- (Clytia hemisphaerica)
CAGGTATTCTTATGATTGTTTCATGGGTTATTTTTGCAACCATTGGTATT
TTCATGGCTCGCTACATGAAACAAGCAACCAAAGATCAAAAGATCAATGG
AAAACAAGCGTGGTTCCCAGTAAGATTTCTGTTACTGTAGGCAATTTCAC
AGTCGAAATGAATCATGGGTAATCAGAACAGTTTCCCGTTGGTTAGATGC
TAAAAAATATCCAAAAATTTAGACCAACAGAAGCGTATTGGTCCTGATTA
CGCATGATTCATTTTGACTGTGAAATGCCCTATTGCTCTAAAATAAAAAG
TTTTTAAGCATTGCCCACTCTAAAGCATCAGCTGGCATCCTCTTGTGGCT
TCGTTGTATTTATACAGTGCAGTTTCTTTAGCTCGAATGTCTCCTTAACT
CAACAAGGTCCCTTTCAGTTAACAATTCCCTATAAACATTACTCCATAGT
TGAACAAATTTGTATTCCCCGTGCTTGTTCGAGTTATGGAGACTCCACTT
TATTACCTTCCGTTTTATGACCTACCAGAGTTCTACAATTCAGACTTCAT
CAGGATAGCATTATCTACTTCGGATGTAAAAGAACGAAATGATCATTAAC
TTTCGATTCTTTTCTTCTTTCTCAGATTCATCAAATGTTTATGTTATTGT
GTGTCATCTGTTTTCTGATTGGTTTCATCTTGATCTTTGTGGAAAAAGCA
GGCTGGGTCGTAAGTAGTAGTACTCTTTTTTCCCGGGAATTTTATTCTTG
CCATAACCTAAGAACAAATTTAAGAACATCAAAAAATGTCAGAATATTAT
TAAAAAAACACTGATTTCAAGCCCATTTAAGTCAATAAATTAAGCTTAGT
ATTCAGAATATTTTATTACTAATTGATTTTAAAATTTTGTTTTGTGATTT
TAGGAATCGGCAGGAACACACGGACAACTTGGGCTGGTTGTCGTTATTCT
AGGATTAATACAGGTTTGAAAGTTTTTGAAATTTTATGAGCTCATCGAAT
TTAAGGTGTCTCTTCATGATCTTTGAGAGATGATGAGTTTTTAGAAATAT
AGATAGTTTTTTTTAGATCGGAGAGGAAAAAGAGAAAAAACTGCTAGTGT
CAAGCAAGTACCCATTTTCCGGTTAGTGTTGGCCATCTCGTTCAGAATAT
GGCCCCAGTGTATTGTACACGAAGATCGGTTTGCTAACAATTTTACCTTT
GATATTTCAGCCACTGATGGCAATGGTCAGATGTGCACCAGATAGTGAAA
AGTATGTGATGTTAAGATTTTTAAATATTAGTTGGTCTCAAATTTAGATC
TCAAAGAACGTATAAAACAATTGGATTGGTTTGTGTGGGATTATCTTGAT
TTCAGTTAAGTGCTCTCAGGCTCTGCGAAAAGGGCTTTCAAAAGGGCCTT
TCTTTCTAAGAGCCATTTTTTAAGGCTTAGAGGTTTGGGACGCATATAGC
TAAGCCTAGTACGCCTCCCTGGAATTTGACCTACTCATTGAATTCTTCTT
TTTTCAGGCGTTTCATTTTCAACTGGTTCCATCGAACTTTTGGAATGTCA
GCATGGATTATCGGAGGTTTGTTTTTCACCTCTAGTAGTTTAGTTAATTC
TTCCTCTAGTAACATCTCGCACTTGATCGATGATGGTGAGGAAAATATCT
TTATTTATATTTAAATCTGTCAAGTGCTAAGCATCTAAAAAGGCAATAAT
CATTCATGATCAATTGTTAAGGATGTATCAAATAAAATTCATTTATCTAC
AATCATCAACATAATATTTGAGACAAAGGGGATTTCCCTGCGAAATTTTA
AACACCACAAATGATTTTTAAGCGCTATAAACTACAGTTTTAACTCTGAG
TTTTAACTCTGAGTTTTAACTCTGAGTTTTAACTCTGAGTTTTAACTCTG
AGTTTTAACTCTGAGTTTTAACTCTGAGTTTTAACATTTGCTCGAATAAG
GCTCGGAATATAGCCTAAAAGCCACCGAACCCCTCTAAAATCGAAATATT
CAATGAAAGAAAGTGGAAGTGCTAAAATAGCAATTCTCGCCCGAACTTTA
AATTCTGAAAAACGTTAAAGTACATTAAAATGTCAATATATTTCGACCAT
GATTGTAGCACTAAGAATTCACAATTTTCTTCAACTTTTTACCCCTAAAG
ATATTAAAGGCAAGTTTCGTAATGAAATATTTTAAAATTTATCATTAAAC
TATCCAAAATTTATCTTGTCCTTTCTCCAGGTGTATGTATCATATTTGCA
TTCGATAAGATTTTACAAGAAAGTTACACAGAGATGTTGGTATTCATGAT
AGTAGTCGTTGTTTTGTTCATTTTATTGGACATCGTTATTTGTGCTTCCT
CGAAGAATTCCGCCTCAGCTGATGGTAAGGTGTCTTTTTACATTAATATA
AAAGTTTTCAAAGACATTGCACCTCAACCTATCGCACTATCCTTTCATGA
TTGTATCCTTTTACTCTTGATTGATCAGCTCAGTTACCGAGTGTCCCAGA
AAAAAGTCCCCTTCTTTGAAGTTAATTTTCTTGAGTTCTATGAACTTCTA
AAGAGTCAATTTTTTTGCATTGGACAGAGGAAGGAGAAACTTAAATTTTG
AGGGGTCATTTGTCAAATTTGGTCGACTAGATCAAAAGTTATGGTCTAAT
GGCTAAGATTACTTTTCAAAAAAGTCGAAAAAAGGAGAAAAATGAAGGTA
TTAAATATTTACCAAGATAAAGATAAATAATGATTGACATTCTGGTTTTG
TATTATACCATTTGTTTGCCACGCTGATCACTTAGTTAACCGGTGAGAAC
TTTTCAGCCTGTAAGGATACTGTAAAATGAAGGAGCTAAATGCTAAGTGG
TTGGCATTTCAAATCCTTTTGTTTACAGCCCTCGAATTCATCTGGGGTTC
TCAGAATTACAATGTCTTTCACATAGGTACCGTACTTACCAATAACAATC
CAAACGCTCTCTTAACAATCAAAAGCGCCAAAATCGTCAAAAAGGCGTTT
TACCACAGAATAACCGAATTTTTGCGATTTTGGCGCTTTTGATTATTAAG
GGATCGTTAAGAGATTTGGATTGTTATAGGTAAGTACGGTACTGAGTGTG
TTCGGGGTATTTTCTTACTGGGCACGATAGCGGATATTTCACAGTGGGAT
GCGGTGTTTTTATAGAAATTATGAAAGTTAAATCTATACTTATTTCTTTT
CAGTTGCCTATCGAGCCAAGAGTGATTCAGTTGATGTTCAAAATACGTCG
TCTGCCAGTGTAAGTATTTTGTCCTAAAACCTTTTTTCTGTTTCTTGTTC
ATCATGTAAGAGTCCTAGTGTAAGAAACCGAACGGCCTCAGTTTTTTGGA
TTCAAAAAGAAAACTTGGAATGGATAACCTGATAACAGCTGTGGATCTTT
CTTAACGCGATACACTGAAGCTCTAAAGATCGCTGAAACTAACTGTATAT
TTTCGCCCACGTCTTTAGAGCTTCAGCGTACTGGGTCAGAAAATGGGCCA
TTTCATTTTATATCTATGTTGACGAACATATCCAGGAGGTAATTGGAGAA
GAATTTCAAGGGGGTATTTTTTCATATTTCTAGTAGGTCAAAGGTTATTC
TAAAATTTCTAGGGGGTAATAGACTAATTTTTGTTCGTCCACCCTTACTT
TTAAGGTATGAAAATAATTTTTCCGAGACTTCTTTCTCAAATTTTGCTAT
TTTCAAAGGGGTATTATTACATTTCTAAAAATCTTTTTTGCCTTAAGAAG
GATCGTCCACCCCCCTGTATGGAAATTTAATGGAACAGCCCATACGCAAT
CTGTTATCAGGTTAGGAATGGTTTGCTCGATTATTTCGATGTTTAAAGAG
GTGCATGTCCGATACGTGAATTATTTTCCTATATTTTTCTTCCGATCTCT
ATCTTTTAGAACACGACGATTCCAACCATCTTCTGTGTGGTGGTTGCATT
ATTTGCGGCAGCCATGGGTATTTATCATGTTTATATAATTGGTACTTACA
ATGATGGTAATTGATAACTACACTTAAAGAAAGGTAATAGGTATTGTTTA
AAATACCTTAACCTAAAGAATGTTGCTTGCAGCTGAACAGGAGTTCGGAA
ATAAATACAATCTTTTAGAGGTTGGTTATTTTAGACCATGACTCTGTTTT
AGTCCCACTGGAAACTGGTTAGTTCGAAGCATTCTTATTTTTTAGCAAAA
TAGACTTTTTCTCTTGATTTTCAAGTGAATTTGAACTCATTTTAGCCTTT
AACGATTTTTTTTATATAAGACCAATATCATTTTTTGCTTACTCATCAAT
TTTTTAAAATCACATTGAATTCACACATTGAGTATTATTGGTCAGAAGGA
AGAAAAGAAGAACAATTTTTTGCTTATTCAGCACGGACTCGAACATAATA
GGTGACACCAGTTATAATATGAGATTTGTGTCCGATATGAAATGGGAACA
CTTATGTGAAACTCGCCTTTTTGTTTCATTATTCATTCCGCATACAGTAT
CTAGAAAATTGTTTAAGACATCCCCTACAAACTTGATTTTCATTTGATTT
GACATTTTGGTTATTTTCTACAAACTCTTCCTCGCCTCTATCATAATGTT
TGTTTGTGTCGAATCTCCAAAACATACCAAACAGAATAGACGAGCAAACT
AGTCTGTTAATTAATCATGCCAGAGGGCGGGAACATAAAGGTGGCGGGCG
TTTGCTAGAATAGAAGATGTGTAGGAGAACGATCAAAAGTTGGTGAGAGG
CTGCTGATTAACAGCCCTTGCCGCCGACAAAATTTCTTCCTACGCTCACC
TAACTCCTACGCTCACTTTTCCCGCGTGATACCGTTCCTGCCCGACTGGT
GTGCCATAGATAGAAATTGAAAAGGTTAAAAGTTCATCCCACATCGGAGT
AATAATAGTGATGTCATTATAGATCAAGAATAAACTTAAGCTTGCATTAG
TGAAGTTTTTAGATCAAGCGTGTTTAGATGCTTATTAAAGAAAGGGAGTG
CCCAAATTGGTTAATCCTATATTTTGATATTATCATCATATACATTCTGC
ATTTCATATACATTTTTCATATACATTTTCATATTCATTTTTTATATACA
TTTCATACACATTTTATACTACTTTTACAGTCTGTACTGTTTTGGTAATT
ATCTAAAAAGACAATAAATCCAGCC

Coding sequence (CDS) from alignment at sc0000378:41511..46685-

>TCONS_00021116 ID=TCONS_00021116|Name=TCONS_00021116|organism=Clytia hemisphaerica|type=CDS|length=5328bp|location=Sequence derived from alignment at sc0000378:41511..46685- (Clytia hemisphaerica)
AACACGACGATTCCAACCATCTTCTGTGTGGTGGTTGCATTATTTGCGGC
AGCCATGGGTATTTATCATGTTTATATAATTGGTACTTACAATGATGGTA
ATTGATTGCCTATCGAGCCAAGAGTGATTCAGTTGATGTTCAAAATACGT
CGTCTGCCAGTGTGTATGTATCATATTTGCATTCGATAAGATTTTACAAG
AAAGTTACACAGAGATGTTGGTATTCATGATAGTAGTCGTTGTTTTGTTC
ATTTTATTGGACATCGTTATTTGTGCTTCCTCGAAGAATTCCGCCTCAGC
TGATGGCGTTTCATTTTCAACTGGTTCCATCGAACTTTTGGAATGTCAGC
ATGGATTATCGGAGCCACTGATGGCAATGGTCAGATGTGCACCAGATAGT
GAAAAGAATCGGCAGGAACACACGGACAACTTGGGCTGGTTGTCGTTATT
CTAGGATTAATACAGATTCATCAAATGTTTATGTTATTGTGTGTCATCTG
TTTTCTGATTGGTTTCATCTTGATCTTTGTGGAAAAAGCAGGCTGGGTCG
GTATTCTTATGATTGTTTCATGGGTTATTTTTGCAACCATTGGTATTTTC
ATGGCTCGCTACATGAAACAAGCAACCAAAGATCAAAAGATCAATGGAAA
ACAAGCGTGGTTCCCAAACACGACGATTCCAACCATCTTCTGTGTGGTGG
TTGCATTATTTGCGGCAGCCATGGGTATTTATCATGTTTATATAATTGGT
ACTTACAATGATGGTAATTGATTGCCTATCGAGCCAAGAGTGATTCAGTT
GATGTTCAAAATACGTCGTCTGCCAGTGTGTATGTATCATATTTGCATTC
GATAAGATTTTACAAGAAAGTTACACAGAGATGTTGGTATTCATGATAGT
AGTCGTTGTTTTGTTCATTTTATTGGACATCGTTATTTGTGCTTCCTCGA
AGAATTCCGCCTCAGCTGATGGCGTTTCATTTTCAACTGGTTCCATCGAA
CTTTTGGAATGTCAGCATGGATTATCGGAGCCACTGATGGCAATGGTCAG
ATGTGCACCAGATAGTGAAAAGAATCGGCAGGAACACACGGACAACTTGG
GCTGGTTGTCGTTATTCTAGGATTAATACAGATTCATCAAATGTTTATGT
TATTGTGTGTCATCTGTTTTCTGATTGGTTTCATCTTGATCTTTGTGGAA
AAAGCAGGCTGGGTCGGTATTCTTATGATTGTTTCATGGGTTATTTTTGC
AACCATTGGTATTTTCATGGCTCGCTACATGAAACAAGCAACCAAAGATC
AAAAGATCAATGGAAAACAAGCGTGGTTCCCAAACACGACGATTCCAACC
ATCTTCTGTGTGGTGGTTGCATTATTTGCGGCAGCCATGGGTATTTATCA
TGTTTATATAATTGGTACTTACAATGATGGTAATTGATTGCCTATCGAGC
CAAGAGTGATTCAGTTGATGTTCAAAATACGTCGTCTGCCAGTGTGTATG
TATCATATTTGCATTCGATAAGATTTTACAAGAAAGTTACACAGAGATGT
TGGTATTCATGATAGTAGTCGTTGTTTTGTTCATTTTATTGGACATCGTT
ATTTGTGCTTCCTCGAAGAATTCCGCCTCAGCTGATGGCGTTTCATTTTC
AACTGGTTCCATCGAACTTTTGGAATGTCAGCATGGATTATCGGAGCCAC
TGATGGCAATGGTCAGATGTGCACCAGATAGTGAAAAGAATCGGCAGGAA
CACACGGACAACTTGGGCTGGTTGTCGTTATTCTAGGATTAATACAGATT
CATCAAATGTTTATGTTATTGTGTGTCATCTGTTTTCTGATTGGTTTCAT
CTTGATCTTTGTGGAAAAAGCAGGCTGGGTCGGTATTCTTATGATTGTTT
CATGGGTTATTTTTGCAACCATTGGTATTTTCATGGCTCGCTACATGAAA
CAAGCAACCAAAGATCAAAAGATCAATGGAAAACAAGCGTGGTTCCCAAA
CACGACGATTCCAACCATCTTCTGTGTGGTGGTTGCATTATTTGCGGCAG
CCATGGGTATTTATCATGTTTATATAATTGGTACTTACAATGATGGTAAT
TGATTGCCTATCGAGCCAAGAGTGATTCAGTTGATGTTCAAAATACGTCG
TCTGCCAGTGTGTATGTATCATATTTGCATTCGATAAGATTTTACAAGAA
AGTTACACAGAGATGTTGGTATTCATGATAGTAGTCGTTGTTTTGTTCAT
TTTATTGGACATCGTTATTTGTGCTTCCTCGAAGAATTCCGCCTCAGCTG
ATGGCGTTTCATTTTCAACTGGTTCCATCGAACTTTTGGAATGTCAGCAT
GGATTATCGGAGCCACTGATGGCAATGGTCAGATGTGCACCAGATAGTGA
AAAGAATCGGCAGGAACACACGGACAACTTGGGCTGGTTGTCGTTATTCT
AGGATTAATACAGATTCATCAAATGTTTATGTTATTGTGTGTCATCTGTT
TTCTGATTGGTTTCATCTTGATCTTTGTGGAAAAAGCAGGCTGGGTCGGT
ATTCTTATGATTGTTTCATGGGTTATTTTTGCAACCATTGGTATTTTCAT
GGCTCGCTACATGAAACAAGCAACCAAAGATCAAAAGATCAATGGAAAAC
AAGCGTGGTTCCCAAACACGACGATTCCAACCATCTTCTGTGTGGTGGTT
GCATTATTTGCGGCAGCCATGGGTATTTATCATGTTTATATAATTGGTAC
TTACAATGATGGTAATTGATTGCCTATCGAGCCAAGAGTGATTCAGTTGA
TGTTCAAAATACGTCGTCTGCCAGTGTGTATGTATCATATTTGCATTCGA
TAAGATTTTACAAGAAAGTTACACAGAGATGTTGGTATTCATGATAGTAG
TCGTTGTTTTGTTCATTTTATTGGACATCGTTATTTGTGCTTCCTCGAAG
AATTCCGCCTCAGCTGATGGCGTTTCATTTTCAACTGGTTCCATCGAACT
TTTGGAATGTCAGCATGGATTATCGGAGCCACTGATGGCAATGGTCAGAT
GTGCACCAGATAGTGAAAAGAATCGGCAGGAACACACGGACAACTTGGGC
TGGTTGTCGTTATTCTAGGATTAATACAGATTCATCAAATGTTTATGTTA
TTGTGTGTCATCTGTTTTCTGATTGGTTTCATCTTGATCTTTGTGGAAAA
AGCAGGCTGGGTCGGTATTCTTATGATTGTTTCATGGGTTATTTTTGCAA
CCATTGGTATTTTCATGGCTCGCTACATGAAACAAGCAACCAAAGATCAA
AAGATCAATGGAAAACAAGCGTGGTTCCCAAACACGACGATTCCAACCAT
CTTCTGTGTGGTGGTTGCATTATTTGCGGCAGCCATGGGTATTTATCATG
TTTATATAATTGGTACTTACAATGATGGTAATTGATTGCCTATCGAGCCA
AGAGTGATTCAGTTGATGTTCAAAATACGTCGTCTGCCAGTGTGTATGTA
TCATATTTGCATTCGATAAGATTTTACAAGAAAGTTACACAGAGATGTTG
GTATTCATGATAGTAGTCGTTGTTTTGTTCATTTTATTGGACATCGTTAT
TTGTGCTTCCTCGAAGAATTCCGCCTCAGCTGATGGCGTTTCATTTTCAA
CTGGTTCCATCGAACTTTTGGAATGTCAGCATGGATTATCGGAGCCACTG
ATGGCAATGGTCAGATGTGCACCAGATAGTGAAAAGAATCGGCAGGAACA
CACGGACAACTTGGGCTGGTTGTCGTTATTCTAGGATTAATACAGATTCA
TCAAATGTTTATGTTATTGTGTGTCATCTGTTTTCTGATTGGTTTCATCT
TGATCTTTGTGGAAAAAGCAGGCTGGGTCGGTATTCTTATGATTGTTTCA
TGGGTTATTTTTGCAACCATTGGTATTTTCATGGCTCGCTACATGAAACA
AGCAACCAAAGATCAAAAGATCAATGGAAAACAAGCGTGGTTCCCAAACA
CGACGATTCCAACCATCTTCTGTGTGGTGGTTGCATTATTTGCGGCAGCC
ATGGGTATTTATCATGTTTATATAATTGGTACTTACAATGATGGTAATTG
ATTGCCTATCGAGCCAAGAGTGATTCAGTTGATGTTCAAAATACGTCGTC
TGCCAGTGTGTATGTATCATATTTGCATTCGATAAGATTTTACAAGAAAG
TTACACAGAGATGTTGGTATTCATGATAGTAGTCGTTGTTTTGTTCATTT
TATTGGACATCGTTATTTGTGCTTCCTCGAAGAATTCCGCCTCAGCTGAT
GGCGTTTCATTTTCAACTGGTTCCATCGAACTTTTGGAATGTCAGCATGG
ATTATCGGAGCCACTGATGGCAATGGTCAGATGTGCACCAGATAGTGAAA
AGAATCGGCAGGAACACACGGACAACTTGGGCTGGTTGTCGTTATTCTAG
GATTAATACAGATTCATCAAATGTTTATGTTATTGTGTGTCATCTGTTTT
CTGATTGGTTTCATCTTGATCTTTGTGGAAAAAGCAGGCTGGGTCGGTAT
TCTTATGATTGTTTCATGGGTTATTTTTGCAACCATTGGTATTTTCATGG
CTCGCTACATGAAACAAGCAACCAAAGATCAAAAGATCAATGGAAAACAA
GCGTGGTTCCCAAACACGACGATTCCAACCATCTTCTGTGTGGTGGTTGC
ATTATTTGCGGCAGCCATGGGTATTTATCATGTTTATATAATTGGTACTT
ACAATGATGGTAATTGATTGCCTATCGAGCCAAGAGTGATTCAGTTGATG
TTCAAAATACGTCGTCTGCCAGTGTGTATGTATCATATTTGCATTCGATA
AGATTTTACAAGAAAGTTACACAGAGATGTTGGTATTCATGATAGTAGTC
GTTGTTTTGTTCATTTTATTGGACATCGTTATTTGTGCTTCCTCGAAGAA
TTCCGCCTCAGCTGATGGCGTTTCATTTTCAACTGGTTCCATCGAACTTT
TGGAATGTCAGCATGGATTATCGGAGCCACTGATGGCAATGGTCAGATGT
GCACCAGATAGTGAAAAGAATCGGCAGGAACACACGGACAACTTGGGCTG
GTTGTCGTTATTCTAGGATTAATACAGATTCATCAAATGTTTATGTTATT
GTGTGTCATCTGTTTTCTGATTGGTTTCATCTTGATCTTTGTGGAAAAAG
CAGGCTGGGTCGGTATTCTTATGATTGTTTCATGGGTTATTTTTGCAACC
ATTGGTATTTTCATGGCTCGCTACATGAAACAAGCAACCAAAGATCAAAA
GATCAATGGAAAACAAGCGTGGTTCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011832XLOC_011832Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021116-exon-sc0000378-1575043694:46567..46685TCONS_00021116-exon-sc0000378-1575043694:46567..46685Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1575043694:45977..46060TCONS_00021116-exon-sc0000378-1575043694:45977..46060Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1575043694:45723..45782TCONS_00021116-exon-sc0000378-1575043694:45723..45782Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1575043694:45435..45475TCONS_00021116-exon-sc0000378-1575043694:45435..45475Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1575043694:45120..45178TCONS_00021116-exon-sc0000378-1575043694:45120..45178Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1575043694:44312..44455TCONS_00021116-exon-sc0000378-1575043694:44312..44455Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1575043694:43427..43482TCONS_00021116-exon-sc0000378-1575043694:43427..43482Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1575043694:41511..42776TCONS_00021116-exon-sc0000378-1575043694:41511..42776Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:46567..46685TCONS_00021116-exon-sc0000378-1510915933:46567..46685Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:45977..46060TCONS_00021116-exon-sc0000378-1510915933:45977..46060Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:45723..45782TCONS_00021116-exon-sc0000378-1510915933:45723..45782Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:45435..45475TCONS_00021116-exon-sc0000378-1510915933:45435..45475Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:45120..45178TCONS_00021116-exon-sc0000378-1510915933:45120..45178Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:44312..44455TCONS_00021116-exon-sc0000378-1510915933:44312..44455Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:43427..43482TCONS_00021116-exon-sc0000378-1510915933:43427..43482Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1510915933:41511..42776TCONS_00021116-exon-sc0000378-1510915933:41511..42776Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:46567..46685TCONS_00021116-exon-sc0000378-1491911889:46567..46685Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:45977..46060TCONS_00021116-exon-sc0000378-1491911889:45977..46060Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:45723..45782TCONS_00021116-exon-sc0000378-1491911889:45723..45782Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:45435..45475TCONS_00021116-exon-sc0000378-1491911889:45435..45475Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:45120..45178TCONS_00021116-exon-sc0000378-1491911889:45120..45178Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:44312..44455TCONS_00021116-exon-sc0000378-1491911889:44312..44455Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:43427..43482TCONS_00021116-exon-sc0000378-1491911889:43427..43482Clytia hemisphaericaexon
TCONS_00021116-exon-sc0000378-1491911889:41511..42776TCONS_00021116-exon-sc0000378-1491911889:41511..42776Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021116-proteinTCONS_00021116-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000378supercontigsc0000378:41511..46685 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.481927	0.702798	0.421547	0.479054	0.384092	0.140053	0.563823	0.738053	1.40269	0.803114	1.28996	0.423425	6.59085	5.43109	9.24129	8.56798	1.23331	1.34838	2.00208	4.12157	0.551686	0.464757	0.552418	0.502352	4.23653	2.1623	0.570552	0.705615	0.58344	0.743182
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006593Cyt_b561/ferric_Rdtase_TM
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021116 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top