TCONS_00021078 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021078
Unique NameTCONS_00021078
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2305

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021078 ID=TCONS_00021078|Name=TCONS_00021078|organism=Clytia hemisphaerica|type=transcript|length=2305bp
AAATAGCAGGGCACAAAGCGATAGTTGTTTATAAAACAACACGGAGAATA
AAAGGGTTTATTGTCGGTAGCTAGTACTTCCAATGGCTTTTAACAACGGT
GTATAATGGGACAATGTGATATTTGTTTTCAAAGCCTTTAAAATCTTAGC
TTCTTCCTTGGAAACTTATATAGCAGCTGGGAGCTGACTTTTTAAAGAAG
ATACTCAGGAAAGCGATTATTTGAAAGATGAGGGAGATACAAGTACTTCT
ACTGTTCAATTTATGTATCGCTTCTTACGGACAAGTTCCAGCTGGTCCAG
TTGTGAGGGACagactttataagaatattggAAAGATCCACAAATCATAT
TCGTTCACTTTCGAAATCAAACCAACAGGAACAATCACAGGATGGTCAAA
CATCGTTCATGCTTATGATAAAGAAGGAAACTGTTGTGGAGTCGGTCAAC
GTATCCCTGCTATATTTGTGCACTCGCGATCCACTCGTCTTCACATTACC
AACGCTGTGAGTGGTAATGGAAACTACGCTGTCAATAGAAATATACCTAT
GGGCCAATTCACCAATGTGACAATTCAGCAAGTTAAGCAATCAGATGGCT
CATACCTGTATTCAATTTACCTCGATAAGACAAGAGTTGCCTCCACAATC
AATACCCAACCTCAGGAATTCGACAATGTTCAATTGTATGCTTCAGATAA
ATGGTACAATCCATCTGAAGTTGTCTTGAGATATTTCAACTTCCAAAGTC
CTTACTCAAAACACGCTGGTCCAGTTGTGAGGGACAGACTTTACAAGAAC
ATCGGAAAGATCCACAAATCATATTCGTTCACTTTCGAAATCAAACCAAC
AGGAACAATCGCAGGATGGTCAAACATCGTTCATGCTTATGATAGAGAAG
GGAACTGTTGTGGAGTCGGTCAACGTATCCCTGCTATATTTGTGTACTCG
CGATCCACTCGTCTTCACATTACCAACGCTGTGAGTGGTAATGGAAACTA
CGCTGTCAATAGAAATATACCTATGGGCCAATTCACCAATGTGACAATTC
AGCAAGTTAAGCAATCAGATGGCTCATACCTGTATTCAATTTACCTCGAT
AAGACAAGAGTTGCCTCCACAATCAATACCCAACCTCAGGAATTCGACAA
TGTTCAATTGTATGCTTCAGATAAATGGTACAATCCATCTGAAGTTGTCT
TGAGATATTTCAACTTCCAAAGTCCTTACTCAAAACACGGTAAGCTCACG
CAGTTACTTTGTCGTCTACATTTTAGATNATGTTCAATTGTTTGCTTCAG
ATAAATGGTACAATCCATCTAAAGTTGTCTTGAGATATTTCAACTTCCAA
AGTCCTTTCCCAAAACAAGaatgtGGTGTCAGCAAAGTTGGACAAAGCAG
AATCGTTGGTGGTCAGAATGCTCTGCCGGGAGAATGGCCATGGCAGGCAT
TTTATATAATTAGAAAAGGAACCAGAGCCTTTTCCTGTGGAGGCGTTTTG
ATCCACAAGAAATGGGTGTTAACGGCCGCCCACTGTACAGTAGGAGACGG
TGCTTTTGTTAGTAAACTTTATCTGGGCGAACACGAGCGTGGAAAAGTTG
ACACTGGAGAACAAACGCCAAAAGTAAAACGAATAATCAACCATGAAATG
TATCGACTCGCACCAGGAACCAATAGTTTTGACTTTGCacttttggaact
ggaaacaGAAGCTCAAATAACAGATAACGTTCGCACTATTTGTATTCCAA
AGAAGCATAGCGGGACTGATTTTGATAATCAAATATGTGACATCACAGGA
TGGGGAACAACGTCAGAAGGTGGCAGTGGCGCCAACATCTTACAAGAAGC
GAGTGTTAGAGTGTACCCTCAACCAGAATGTGTTGGAAATTACGGTAGTC
GAATTGGTGACAGTATGTTTTGTGCCGGATATCGTGATGGTGGAGTAGAC
GCGTGTCAAGGAGACAGTGGTGGTCCCTTACAATGCAAAGATGGAAACAA
ATGGGTTCTCTGGGGAATAACATCTTGGGGTATTGGATGTGCCAGACCTG
ATAGAGCTGGAGTCTATAGCAAGGTTACACAAGTTGTGGATTGGATTGAA
GAGAAAACTGGAGTtactttttaaaacattttgtttatttcataAGGTTT
tattaaacgcttttttataagaatatcagggtgagaatTGACTAAATGTT
AAGAATGTCAAAAGACTGTGTTGAGAATATCTCACCCTCAGATTCTGAAT
ATTCCTAAAGATACTTCACTCTcacccaaaaaaaaacataagtaTTATAA
AAGTG
Run BLAST on NCBI

transcript from alignment at sc0000377:216529..228632-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021078 ID=TCONS_00021078|Name=TCONS_00021078|organism=Clytia hemisphaerica|type=transcript|length=12104bp|location=Sequence derived from alignment at sc0000377:216529..228632- (Clytia hemisphaerica)
AAATAGCAGGGCACAAAGCGATAGTTGTTTATAAAACAACACGGAGAATA
AAAGGGTTTATTGTCGGTAGCTAGTACTTCCAATGGCTTTTAACAACGGT
GTATAATGGGACAATGTGATATTTGTTTTCAAAGCCTTTAAAATCTTAGC
TTCTTCCTTGGAAACTTATATAGCAGCTGGGAGCTGACTTTTTAAAGAAG
ATACTCAGGAAAGCGATTATTTGAAAGATGAGGGAGATACAAGTACTTCT
ACTGTTCAATTTATGTATCGCTTCTTACGGACAAGGTAATCTATTCATTT
GTTACAAATATTTGGTGATATCACAGTACTTAAAATAAGATAAAGAAACT
GGCCTAGGGTATTAAAGTTGACAATTCCAGTGCAACAGAGTGGTGCCCTC
CCTTCCTTTGGGTTGATAGCTATTGAAAGAAAGAGGAGCCTTCGACTGAG
GTCGCAGATTTCAGTTGAACTCTTGTAATTCGAATACTCACCTAATTCAA
ACAGATTCTGTGGTCCCTTCATAATTTACCTTGAAAACCTTACAAGAAAA
CTCCTATGATTTGAACCCATGTAATTTGAAAAATCATTTAAATCGAACAA
ATTATCCGGTCCCATCAGAAAATTTTAATCATGTAATTCGAATTTTGGAG
GAGAATTCCAAGAAACGAGAGCAGAAAATGAAACAATCGACAATCGAATT
ACTTTTTTGAAAAATTATGAATTGACTTTTAAATTTAAAAACATGACCGT
GTCAAGATTATTTGTACTAGTATTTCACAATTCTCGCTCGAAAATACAAA
AATTGTTCAAAAGTAAACCTGGGAAAGTCTTTTTTCATCAAATCAGGTCA
AAAATATGAAAACTCATTTAATTCGAAACTCATGTAATTTGAACAAAATT
CTCGGTCCCTTAAGAATTCGTAGCGAGCGGCGCCATATTAGCCATTGAGG
AGACTTTTAAAAAATATACAAAAAGTTTCTGTGGTGAGAAGGGTTTTGGA
GTATAATATTTTCAAATACAATTTCATCGTAAAGAACTTTCCCGGTTGAG
ATGATACATTTCATTGTATTCTTTTTATCGGGGACGAACTTTGGGCAAGT
TTTTCTAGCAGGTGGGAGCTCCAACGAGTCTGACACTGGGGTGTAATAGA
TATTTTTGAAAAACGTTTTCTCAATCCAAATCATCGCTCTTAAACTCAAT
CTTTTTTTTTGTATTAGTTCCAGCTGGTCCAGTTGTGAGGGACAGACTTT
ATAAGAATATTGGAAAGATCCACAAATCATATTCGTTCACTTTCGAAATC
AAACCAACAGGAACAATCACAGGATGGTCAAACATCGTTCATGCTTATGA
TAAAGAAGGTATGTCTTATAACTACAAACAGACCGCGTCTTGCAGATATC
TATGTATCTTGAAGACTCTGCTTTAATATTCTATATTTCTTATTTACACA
CTTTTTTTATAAGAATACATTTTAATAAAAATGTTCATGATGAAAATGGC
CAAAAAATTTGAATAATGCTAAGAATATCACCGTCATAGAATTTTGCTAC
TCAAGCTAAGAATGTAACTTATAGAGCATTTTCAATTATAAATTATCAAT
TACCCTAAAGTAATGCACACTCCTTTCACAAAAATGCCATTTTATGCTTA
AGAGGCATGTACTAAATGTTAAATCTAGTTTGAATTAGGATCCTAACCTA
AGAATACTGTAGGAATGATGATTTTCTCAAAAAGAATTAAGAATATCCAT
GATGAAATGAATTTACACCATTCCTATAAAGAAAAAAGCGTGTATTTCAC
TAATCTCGAAAGTTTTCTTAAATTTGAATGAATATTTGCGACAACTTTCG
TGGGACGCAGCTGCATGTGATTGGTTCAAAAGTAGATAGGATTTTAAATC
TTTTTGAGAGGAGGTCCATGTATTGAGCCTGGCAAAAGCTTTTATGACCT
AAAAGTTCCAGACAAGACTTTTAATCCAAAATATTAGGTAAAAAAATTGC
CGACTTTTCATGATCATTTCCAAAAGGCATGATTGATACGGGCGAATAGA
GCATGAAATAATTCCCTATCATAGCTTTGTGTTGTCATCATTTGTTCTCA
ATTTCAAAAATGAATTTCTGACACCTGATGAAATCCGACGCCAATGTCGA
GTCAGCTTTGAAATATATATTCTTTTTCTTCAGGAAACTGTTGTGGAGTC
GGTCAACGTATCCCTGCTATATTTGTGCACTCGCGATCCACTCGTCTTCA
CATTACCAACGCTGTGAGTGGTAATGGAAACTACGCTGTCAATAGAAATA
TACCTATGGGCCAATTCACCAATGTGACAATTCAGCAAGTTAAGCAATCA
GATGGCTCATACCTGTATTCAATTTACCTCGATAAGACAAGAGTTGCCTC
CACAATCAATACCCAACCTCAGGAATTCGACAATGTTCAATTGTATGCTT
CAGATAAATGGTACAATCCATCTGAAGTTGTCTTGAGATATTTCAACTTC
CAAAGTCCTTACTCAAAACACGGTAAGCTCACGCAGTTACTTTGTCGTCT
ACATTTTAGATTAAGAACGCCTTGATCGTTTCGTTATTTTGCACCTGGGG
AATTTGCCTCTCTGCCAGGGGCCGATTTTTTTTGGGTGGCGCCGAAATAC
AAAGGGTGCAAAAAGATGCCTCTGATTACTAATTTGGGCGCCCCACTGCT
CTTTTAGACCTTAGATATGGCCGTTTTCGGTCAAAGAAAATAAACTATTA
TTAACCCCTTTATACCATTTTTTCATCTCGCGAAAGAATCTGCTCGCGAA
AGTTCGTAAGCCTAAAGTAGTTTCAATATTTGATCGAACGTACGTGACTT
TACTAACTCTTAGCCTTCTAGTCTCTAGTTACAACCGGTCTCAGTATTTT
TAATGAACATCATATTTTTATTAGCTACATATATATTTATCATACTCATA
CTAATCATATTCTTGAATCGAGATTTATAGCCTGATGAAATTTGCTTTCC
ACAAGTCATGTGCACAGTTATTGATTTGAAACACATTGAATAACTACACT
TTTAAAACTCAACTTTCTGATTTTCCAGCTGGTCCAGTTGTGAGGGACAG
ACTTTACAAGAACATNAAGTCATGTGCACAGTTATTGATTTGAAACACAT
TGAATAACTACACTTTTAAAACTCAACTTTCTGATTTTCCAGCTGGTCCA
GTTGTGAGGGACAGACTTTACAAGAACATCGGAAAGATCCACAAATCATA
TTCGTTCACTTTCGAAATCAAACCAACAGGAACAATCGCAGGATGGTCAA
ACATCGTTCATGCTTATGATAGAGAAGGTATGTTTCGGAAAGGCTGGTAG
TAAAGTAATTCTTCTTCTTCCAGCTTTCCAATCAATCTTGTTTTACACAC
CTAGATCTACATAAACTTTCTTAACTTAACAAAACGGATTTTTAAAGCTT
TTTTGTTGTTTGTCATATCGGGCAATATAAAGCCCTGCATTCTCGCTGAA
TTTTTCTTAAACTTAATAAAAACATTTCTGATGATGTCTTCTAAACACAT
GAATTCAAGCACATTCACCTTGTCGAGTCAGCTTTGAAATATGTAATCTT
TTCCTTCAGGGAACTGTTGTGGAGTCGGTCAACGTATCCCTGCTATATTT
GTGTACTCGCGATCCACTCGTCTTCACATTACCAACGCTGTGAGTGGTAA
TGGAAACTACGCTGTCAATAGAAATATACCTATGGGCCAATTCACCAATG
TGACAATTCAGCAAGTTAAGCAATCAGATGGCTCATACCTGTATTCAATT
TACCTCGATAAGACAAGAGTTGCCTCCACAATCAATACCCAACCTCAGGA
ATTCGACAATGTTCAATTGTATGCTTCAGATAAATGGTACAATCCATCTG
AAGTTGTCTTGAGATATTTCAACTTCCAAAGTCCTTACTCAAAACACGGT
AAGCTCACGCAGTTACTTTGTCGTCTACATTTTAGATNATGTTCAATTGT
TTGCTTCAGATAAATGGTACAATCCATCTAAAGTTGTCTTGAGATATTTC
AACTTCCAAAGTCCTTTCCCAAAACAAGGTAATAAGACTTCACAGTGAAA
TAGATTTCTTAAAATAGCATACAATGGAATGTTTTATGCCCATGTTCCCT
GTCCTGTTCAATTTTTAGATAATCTCTCAATTTCTGAGACAATGGTCCCA
AAGCCCTCTGTCAGCGTTGAGTTCTTGAAAATTTTGGGGTCTGGGGAACG
GATTTTTTCTTGCAAAAATGTTTAAAATCCTTCCGTTTCAAGATACTTGT
TGGGGACCTCAATCACACTCATTGTACCAATACTTGTCTTGCAAAATGCT
TGACTTTTACAACAATACAAATCATATCTTTTTTTAAGAATGTGGTGTCA
GCAAAGTTGGACAAAGCAGAATCGTTGGTGGTCAGAATGCTCTGCCGGGA
GAATGGCCATGGCAGGTTCGAAACATTGTTTTCCAAATAAATTTATAAAA
GTGGACTCTCTATAACTCGAACCTCTAATACTCGAATGTCTCCTTAACCC
GAACAAGTTTTTTTGTTCATTCAGTTAATAATGCCTAATAAACCTATACT
CTTTATTTCAAAATCCCCTTAACTCGAATGAATTTGTGTTCCCCGTGCGT
GTTCGAGTTATAGAGATTCTGCATTAAAGCTCTAGCATGAAACCCGTCAC
AGTGACAACCTAAAAACCTTTTTCTCTAGACTCTACCCCATACATACACC
TATAAACTCCTAAAACGTGAAAAGACTGGGTTAGAATTTCCCTAGTAAAT
TTTTGCACAAAAAGTGCTGTCGTCAACAGAAACATCATTTCAAGAGTTTC
TCTCTCAATTTTTATTTTCTTTACTTCATGAGGAACCTCTGTGCAAAATT
TCAGAGCTCTATCACAGTTTGAAGTATTGTCCCTTTTATATGTGATAATC
CGCCCTACTATAGAAGGATTGACGTCAAAATGTCAGGAGTCATTGCATTG
ACTTTTCATAAAAAAGGAATTTTGACATTAATCTCTCCTGGCGGCTCTAA
CCCAGCTTTCTCATGCTTTAGGCGTATTAAGGAATACAGTTGTGTAAAAC
ATTTTCCATGCCTTATATACTGAGGCAGTAATCAACTTTTTTACATTTAG
CCATAGTGTATTCACCAATAGTAGCTTGGCGGCACCCATTCCCATTTTTA
TATCGCAACAAACATTACCCTATATATTTTGCAATCGCTTTGCTCGCCAA
ACGTTTCAACAAACTTTTTTCTTAGTGCAGTCAAAATCTTTAATTACTTC
AATTTGCAACCCCATTTTTGGTCGCACCAAGATAAACTTGAGACTCTTTC
GTCTTGGAAAATTTTATCAAAGAGATGGGAAATTTTAATCGTTCTTCTTC
TTTGTACTTCTTCAGGCATTTTATATAATTAGAAAAGGAANTTAAAACGT
GAAAAGACTGGGTTAGAATTTCCCTAGTAAATTTTTGCACAAAAAGTGCT
GTCGTCAACAGAAACATCATTTTCAAGAGTTTCTCTCTCAATTTTTATTT
TCTTTACTTCATGAGGAACCTCTGTGCAAAATTTCAGAGCTCTATCACAA
TTTGAAGTATCGTCCCTTTTATATGTGATAATCCGCCCTACTATAGAAGG
ATTGACGTCAAATTTCAGGAGTCATTGCATTGACTTCTCATCAAGAAAGG
AATTTTGACATTAATCTCTCCTGGTGGCTCTAACCCAGCTTTCTCACGCT
TTAGGCGTATTAAGGAATACAGTTGTGTAAAACATTTTCCATGCCTTATA
TACTGAGGCAGTAATCAACTTTTTTAAATGGAAATATTGGCCTTAGTGTA
TTCACCAATAGTAGCTTGGCGGCACCCATTCCCATTTTTATATCGCAACA
AACATTACCCTATATATTTCGCAATCGCTTTGCTCGCCAAACGTTTCAAC
AAACTTTTTTCTTAGTGCAGTCAAAATCTTTAATTACTTCAATTTGCAAC
CCCATTTTTGGTCGCACCAAGATAAACTTGAGACTCTTTCGTCTTGGAAA
ATTTTATCAAAGAGATGGGAAATTTTAATCGTTCTTCTTCTTTGTACTTC
TTCAGGCATTTTATATAATTAGAAAAGGAACCAGAGCCTTTTCCTGTGGA
GGCGTTTTGATCCACAAGAAATGGGTGTTAACGGCCGCCCACTGTACAGT
AGGAGACGGTGCTTTTGTTAGTAAACTTTATCTGGGTAAGTTATACCAGT
TATTACATTCTCTTTATATGTTTTTACCGGATGTATCGTTCGTTCTACCA
ATTTGAGAGGCTGAAATATAAGTTAAGAAGGAGAGTCGATCGCCATACTA
CCCTTATACTCTTTCTGGGAGTCATCATAGTGAATTTTGTTGCCCATTGG
TTGCGTCATAGTACATGGTAGCGTGAAGGATTAGATGACGGACTGCAATG
GACTTGGCTCGAATCACCTCCGATGGCTAACTGCAACTTACTTACTTAAT
TTCCTGGATCTATTTGAAACTTTTTGTCTTGTCTTTCTAGGCGAACACGA
GCGTGGAAAAGTTGACACTGGAGAACAAACGCCAAAAGTAAAACGAATAA
TCAACCATGAAATGTATCGACTCGCACCAGGAACCAATAGTTTTGACTTT
GCACTTTTGGAACTGGAAACAGAAGCTCAAATAACAGATAACGTTCGCAC
TATTTGTATTCCAAAGAAGCATAGCGGGACTGATTTTGATAATCAAATAT
GTGACATCACAGGATGGGGAACAACGTCAGAAGGTGGCAGTGGCGCCAAC
GTAAGTTGTTTTGGGTTGAATATTTTTCATACGTGGTATATGCATATTGA
CACTTCCTGATGCATATTTCCATAACGGGACGCCATCACTTTAAAAAAAA
TTTTATCAAACTCGAACCCAGTTACTTAGTTCGCTCTTTTATGATTCTGA
TACTGCTCACGAAAAGATTGCATTGCGATTTTATCACCTCCATTAAATTG
CCTTTAAAACATAAGTTTTCAGCAAAAAGAATACATGATATTTTACGCCC
ATAATCGCACGAAGAGTTATTTTTTTTTCTTTGGCGCGCCTTCAAAGAGA
GCAATTAATTGTTAATTGCTTCCTGTAGAGAGCAATTAGGCAATGAGGCT
AATCACTCGTAATTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGGCATTTTATATAATTAGAA
AAGGAACCAGAGCCTTTTCTTGTGGAGGTGTTTTGATCCACAAGAAATGG
GTGTTAACGGCCGCCCACTGTACAGTAGGAGACGGTGCTTTTGTTAGTAA
ACTTTATCTGGGTAAGTTATACCAGTTATTACATTCTCTTTATATGTTTT
TACCGGATGTATCGTTCGTTCTACCAATTTGAGAGGCTGAAATATAAGTT
AAGAAGGAGAGTCGATCGCCATACTACCCTTATACTCTTTCTGGGAGTCA
TCATAGTGAATTTTGTTGCCCATTGGTTGCGTCATAGTACATGGTAGCGT
GAAGGATTAGATGACGGACTGCAATGGACTTGGCTCGAATCACCTCCGAT
GGCTAACCGCAACTTACTTACTTAATTTCCTGGATCTATTTGAAACTTTT
TGTCTTGTCTTTCTAGGCGAACACGAGCGTGGAAAAGTTGACACTGGAGA
ACAAACGCCAAAAGTAAAACGAATAATCAACCATGAAATGTATCGACTCG
CACCAGGAACCAATAGTTTTGACTTTGCACTTTTGGAACTGGAAACAGAA
GCTCAAATAACAGATAATGTTCGCACTATTTGTATTCCAAAGAAGCATAG
CGGGACTGATTTTGATAATCAAATATGTGACATCACAGGATGGGGAACAA
CGTCAGAAGGTGGCAGTGGCGCCAACGTAAGTTGTTTTGGGTTGAATATT
TTTCATACGTGGTATATGCATATTGACACCTCCTGATGCATATTTCCATA
ACGGGACGCCATCACTTTAAAAAAAAATTTATCAAACTCGAACCCAGTTA
CTTAGTTCGCTCTTTTATGATTCTGATACTGCTCACGAAAAGATTGCATT
GCGATTTTATCACCTCCATTAAATTGCCCTTAAAACGTAAGTTTTCAGCA
AAAAGAATACATGATATTTTACGCCCATAATCGCACGAACAGTTATTTTT
TTTTCTTTGGCGCGCCTTCAAAGAGAGCAATTAATCGTTAATTGCTTCCT
GTAGAGAGCAATTAGGCAATGAGGCTAATCACTCGTAATTTTTTTACTTC
AAATTTTCCTCGACCTTTCGGACTCAAACAAAATTAATAACAAAAAAAAT
CACTCGTGCAATTTTCGAATTGTACGAGTTATTATGTGATTACGAGCTAA
TCGTACAATTTTTTCACTACTTTTCCCCGTCAGGAAAGTAAATTACAATG
AAAGTTTTACATTTTTCTCTCGTATTGCACTCTTTATCAATTGATTACAT
ATACTAATCTGATTCTAACATTTCCCGAGTGGATTTAATTTTGTGACTCA
GCAATCTCACGCACGCTATATTTTCGCGAAAAATTCGAGAAAAAATTATC
AGATTAAACAATCGTTTCTACGTCTTTTCAAACCTTTCCCTAATATAAGA
AGCTAATTCCTTGAATAAAGTTATTTTTGCCACTAGTGAAGTATAATTTT
GGAATAGTAGGATGGGGGTAAAATTGTGAAAATCACATGCACAGGAAAAA
TGTTTTGATTCCCTAGGCTATGAAAATGCATACTTCCAGATCTGGAAATC
TGGATTTTTCCCTAACCAATCCCTAGCTAGGGAAGATGCAACAGTTCCCT
AGTTATGGAAATAGAATTTCCCTATTATTGAAAAGTGCTTTTCTCGAGCG
AACCCCAATAAAACCCCATAGAGTTACCCATATTCACGAATTAAATCCTG
ATTTATAGAAAGCTGGTAAAATAATTAAATGTATTCGATCATTCTGTGAG
CATTGGTTCGATAGCTCTCATTCGTTCTGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAATTCTGAATGGGCAACTA
GAATGTTAAAAATATTAGTTTTCCACATGTGGAAATCCGTTTTCACTAAC
ACATTGGTAATACACTTCCAGCATGGGAAAATAGGATTCCCTAGTTTCCT
TACTTTCCCGAACTTAAAATTCTAGACTAATGTGATCGAACAAAAAACCA
CATCTGAAAATGAACAATCCCTAGGCTAGGGAATCAATAATTTTTTTCCT
GTGATGATCAACGTTAACTACACTTTCAATTGTAGATCTTACAAGAAGCG
AGTGTTAGAGTGTACCCTCAACCAGAATGTGTTGGAAATTACGGTAGTCG
AATTGGTGACAGTATGTTTTGTGCCGGATATCGTGATGGTGGAGTAGACG
CGTGTCAAGGAGACAGTGGTGGTCCCTTACAATGCAAAGATGGAAACAAA
TGGGTTCTCTGGGGAATAACATCTTGGGGTATTGGATGTGCCAGACCTGA
TAGAGCTGGAGTCTATAGCAAGGTTACACAAGTTGTGGATTGGATTGAAG
AGAAAACTGGAGTTACTTTTTAAAACATTTTGTTTATTTCATAAGGTTTT
ATTAAACGCTTTTTTATAAGAATATCAGGGTGAGAATTGACTAAATGTTA
AGAATGTCAAAAGACTGTGTTGAGAATATCTCACCCTCAGATTCTGAATA
TTCCTAAAGATACTTCACTCTCACCCAAAAAAAAACATAAGTATTATAAA
AGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011812XLOC_011812Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021078-exon-sc0000377-1575043694:228348..228632TCONS_00021078-exon-sc0000377-1575043694:228348..228632Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:227275..227415TCONS_00021078-exon-sc0000377-1575043694:227275..227415Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:226111..226449TCONS_00021078-exon-sc0000377-1575043694:226111..226449Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:225520..225554TCONS_00021078-exon-sc0000377-1575043694:225520..225554Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:225306..225405TCONS_00021078-exon-sc0000377-1575043694:225306..225405Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:224555..225023TCONS_00021078-exon-sc0000377-1575043694:224555..225023Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:224168..224244TCONS_00021078-exon-sc0000377-1575043694:224168..224244Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:222398..222527TCONS_00021078-exon-sc0000377-1575043694:222398..222527Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:221833..222092TCONS_00021078-exon-sc0000377-1575043694:221833..222092Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1575043694:216529..216997TCONS_00021078-exon-sc0000377-1575043694:216529..216997Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:228348..228632TCONS_00021078-exon-sc0000377-1510915933:228348..228632Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:227275..227415TCONS_00021078-exon-sc0000377-1510915933:227275..227415Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:226111..226449TCONS_00021078-exon-sc0000377-1510915933:226111..226449Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:225520..225554TCONS_00021078-exon-sc0000377-1510915933:225520..225554Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:225306..225405TCONS_00021078-exon-sc0000377-1510915933:225306..225405Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:224555..225023TCONS_00021078-exon-sc0000377-1510915933:224555..225023Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:224168..224244TCONS_00021078-exon-sc0000377-1510915933:224168..224244Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:222398..222527TCONS_00021078-exon-sc0000377-1510915933:222398..222527Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:221833..222092TCONS_00021078-exon-sc0000377-1510915933:221833..222092Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1510915933:216529..216997TCONS_00021078-exon-sc0000377-1510915933:216529..216997Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:228348..228632TCONS_00021078-exon-sc0000377-1491911889:228348..228632Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:227275..227415TCONS_00021078-exon-sc0000377-1491911889:227275..227415Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:226111..226449TCONS_00021078-exon-sc0000377-1491911889:226111..226449Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:225520..225554TCONS_00021078-exon-sc0000377-1491911889:225520..225554Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:225306..225405TCONS_00021078-exon-sc0000377-1491911889:225306..225405Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:224555..225023TCONS_00021078-exon-sc0000377-1491911889:224555..225023Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:224168..224244TCONS_00021078-exon-sc0000377-1491911889:224168..224244Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:222398..222527TCONS_00021078-exon-sc0000377-1491911889:222398..222527Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:221833..222092TCONS_00021078-exon-sc0000377-1491911889:221833..222092Clytia hemisphaericaexon
TCONS_00021078-exon-sc0000377-1491911889:216529..216997TCONS_00021078-exon-sc0000377-1491911889:216529..216997Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:216529..228632 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0.216531	0.0302937	0.153516	2.27941	2.09778	0	0.139121	0	0.106912	0.266782	0.412401	0	0.050872	0	0	0.237494	0	0	0	0	0
Blast
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BLAST of TCONS_00021078 vs. Swiss-Prot (Human)
Match: FA11 (Coagulation factor XI OS=Homo sapiens GN=F11 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.029e-47
Identity = 103/239 (43.10%), Postives = 137/239 (57.32%), Query Frame = 1 
Query: 1399 RIVGGQNALPGEWPWQAFYIIRKGTRAFSCGGVLIHKKWVLTAAHCTVG-DGAFVSKLYLGEHERGKVDTGEQTPKVKRIINHEMYRLAPGTNSFDFALLELETEAQITDNVRTICIPKKHSGTDFDNQICDIXXXXXXXXXXXXANILQEASVRVYPQPECVGNY-GSRIGDSMFCAGYRDGGVDACQGDSGGPLQCKDGNKWVLWGITSWGIGCARPDRAGVYSKVTQVVDWIEEKT 2109
            RIVGG  ++ GEWPWQ        T+   CGG +I  +W+LTAAHC  G +   + ++Y G   + ++        V+ II H+ Y++A   + +D ALL+LET    TD+ R IC+P K    +     C +TGWG         N LQ+A + +    EC   Y G +I   M CAGYR+GG DAC+GDSGGPL CK    W L GITSWG GCA+ +R GVY+ V + VDWI EKT
Sbjct:  387 RIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAE--SGYDIALLKLETTVNYTDSQRPICLPSK-GDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 622
The following BLAST results are available for this feature:
BLAST of TCONS_00021078 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FA119.029e-4743.10Coagulation factor XI OS=Homo sapiens GN=F11 PE=1 ... [more]
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