TCONS_00021042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021042
Unique NameTCONS_00021042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3643

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021042 ID=TCONS_00021042|Name=TCONS_00021042|organism=Clytia hemisphaerica|type=transcript|length=3643bp
CAGACATTTCAGagttgtttgataaaaaagtcgGCTAGCAAGCATATCCT
CCGTTTTATTAACACTCTTGTTATATCTCATAGCGTATGATCCTGGTTGA
AGACGACGTTCGTGTAAAGGTTTGTGTTGTGGAGAACGGGTGTAGCAAAG
TACACGTATAACGCACCACTTGGCAGTTGGTATGGTTTTGTTGTGGCTTC
GCTTTTCGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGGATGGAACCCAAA
GAtgaaagaagccattgtagtgcaatgtttacatttttggaaagttctaA
AATGGTAGAAGAAGCTCTGTAAATAAAAATTAGACTCTTTTACGTGTTGT
GTCGTTCACCACGTTGAGTTGAATTGtgaatagaaaaagaaagtagcATT
ACATGAATCAAAATGACAGAAATGGTTATCATGCCAACAGATGAACGTAT
CCCACCGATGGGATCAGAAGCTGCAGATACACACTTCAATGAAACTGCTG
CATACGATCCTAAATTAAATACAAGAGACTTATCACATAATAATAACAAA
CAATGTATTCCTCATTACGAACATTGGAAGGACAGCTTACCAGATCTATT
AGATGACACAGAaggatataaattattttacgAATTTCTAGAGCAAGATA
AAAGTATCACGTTATTTGAATGTTGGTATTGCTGCAATCAATATCGTAAC
TTGCCACCAACTAGAACTAGTGCCAAAGACATTTATCATAGATTTGTAAA
GAAAAAGGACCCACATATTCCAATTTCTGAtcaagcaagaaataatttgg
tATTGAGGATAAAGGCTAACGATATTACAGAAAAAATTTATGAGGAAATT
GAAAAGGAAGTTTACACTAATTTAAGGGACAtttgttatccaaaattttt
aaaatcagactGTTTTAATCAATATTGCGAAAGTTCTGGTCAAATGCGGT
ATGCAGAATATAATACCGATTATGGAAAGCCATCAACAAAATATAGTGGA
GTCCTTGATCACATTGACAAGCATGACCAGTATCAACCTCAATCAAGATC
AGAtTATGAAAGGCAGTATGAATGCGCCCGTCATCCACACCACGATCGAG
TTCACGGACCCTCATCCAATTATGACGATCATCATAGCATGCCGTCAGAT
TATGATCGTAGCTCTATAACAGATTCCAAAACTTCCATggGATCAAGTAG
TCGACACGGTAGACCGTCTCGAGGTCACAATCGCGATTACGATGGACCAA
TGGACGTTAACAATTTCAAGCCGCGTACGCAGCGAATCAATCAAGATCGC
ATGAAACCGATGAAACCGACAGACTTTGCTGCACTTTTGAcgcaaaaact
tgaaaaagtttTGATCGACCGAACTAGAGATGGCCATGATAATTCGTCAC
ACCATTCTCATGGTGACTCAATGGATCTGTCTTCAATGAAACATCATCTA
CCAGGTGGACACAACAGTCGAGTACCACCCCACCATCAACCTCACATACA
CGATTTCGATGGCCAGAGTGAGAGTGACGCCCAATCTTGGGTGCTCTCTG
ACCGGCCAAGCGTCGCCGGACAATCATCACATAGTGGCTCACACAGTggt
attttaatgaaaaataaagcaaaagaaCTCAGAGATAAAATTCATCATCA
TATTCGAAGTGACTTGAAAGAATGTCGTTGTGCTGAGTGCCGCCTCACGC
CCTCCGTACATTCGGGCGGTCGTCACGAACACGATTCGCATGCACGACAC
GGTGGCTCAGAACATGGTTTTTATCCACACAGTAGTAATAGTAACTCTTA
TAATTATTCCAATGATACAATACAAGACCGATACAATACAATGTCGTCAT
CATCTCACCATCGTGGTTCCTCGCGCACGCGTGAAACGCACCCGCATCCA
GATGCTGCACCACCATTAGACACTAGTAAAATTTATTCTTGGATGGAGAA
AAACGAACGTTACCAACATCAAAAATCGTACCCAGACCCCTCCCCGTCAC
CTTCTTTACGTCGAAAGAAAGCACCTATACAATATAACACAAGTAGGTCA
CAGAACTCTCAACAGCCTATTGCGCAAGATACGGGCATGCCGTTATTACC
ACAACCTGACCCAGACAATGTTTTACAAGAGGTTAAACGGAAACTGGAAG
AACCCTCACGATCACAACAAAATCATCACCGATCTTCaagacaacaacaa
caatatcATACGCCCCATTATGAGGGCGGATACCACCCTCATCACGATAA
TCAATCAATGGCTTCTGCTCCTTGGTCGATGTCTGATAACTCTTCAATTA
TTTCTTATAACCCTTCACAAGTTTCTACCGTACCTTCATCTGCGTCTAGA
TTATGGAACGCTCAAGGTTATTACAAAGATGCCGGTAGTGAAGTCAGAGA
CGATCGTTGCACGCCTAGCGAAGTTCACTCGCAAGCAGCTTCTAAACACA
GCGGTCCGCGTAGCGTGACACGTAGTGATCATATGAGCGCTGCACGCAGT
GATCATCACAGTGACGTAAGATCACAATCGACGGGAATTAGTTACGGCAG
TGACGGTAGTAAAGGACGTTCTTCTTCttctaaaaataaaactgtTATCA
CGTATTATTACGGTAGTGAACCTATCCCGTACCGTATTAGCGTTCCGACT
ACGGAGGTTACGTTGTCACAATTCAAACTCGAAACCAAACGTGGTAATTA
TCGCTTTTTTTTCAAGACTGTTTCCAGTGTCGATGGTGAGGTTGTTTGGG
AAGAATTCAAAAACGATGATGATGTCCTACCTAAATTTAATGATAAAATT
GTTGGCAAAGTCGATAAGATCTAATTGACTTTGGTTTTTGGATTTATTTG
TTGTTATTGTTTGGATTATTTCTCTTAATGATAATCATGACGGAATTGTT
GTTAATGTGGACCAAGTTTTGATTCTACCATAATGAACTTATaatattta
tgacgtaatgttttaaacAGAAGCACCCTAAAAGACCAAACAGCCGGTCT
AATTTTGAATTAAACAATAAACTAGGCCCTGGCTATTTTGGGTGCTTGCG
TCTGAAAAATTCCGACATGAATGATTGATCATGAATTGATAAATgcgttg
tttttttatatagaTCCTCGTGTTaatgattacgtcatgaatattattGT
CCGCTTGGTTATATTATCactgtcttttttttttcaaatttatgctCTGC
ATTTAAAACTTTATCACTATTTATATTTTGCCAATTCTTCTACCCCTGTT
TGATACCCCTAAatatttgttcaattttttaccTTCCTCGTACAGGTTCG
GGAatcgaaattcattttgacaaatttgaactttttgccaAGTGTCAAGA
TATTCTTTCCTTGCTTACTCTTGGCTTTACCTTTCCAACTTTCTTCCTTT
TTCCTTTTATATTCCttcctaaattttttaaaatagatattttacaattt
tctccCTTTAAGTTAATATACAATATACTGAAaagagttttattttttac
tagATTTATCTTACTACCCCATGATTGTATGATATTTTAAGATAAACCCC
GAAATATACCCCTTTATAATTACACCCCAATATtgtgaaaaaatgaaata
atatcaaaaaatacaacaaaaggaaaaatgtgaaaattaacaa
Run BLAST on NCBI

transcript from alignment at sc0000377:136750..149964+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021042 ID=TCONS_00021042|Name=TCONS_00021042|organism=Clytia hemisphaerica|type=transcript|length=13215bp|location=Sequence derived from alignment at sc0000377:136750..149964+ (Clytia hemisphaerica)
CAGACATTTCAGagttgtttgataaaaaagtcgGCTAGCAAGCATATCCT
CCGTTTTATTAACACTCTTGTTATATCTCATAGCGGTAGgtttttttgtt
tgtatatAAGAAGCTTTTCCTATTCAATGACATGTCATATAAATAATACT
TGCCAAGAATGGTGTATATTTTGTCAATAGTAATAAATGAGTAGTGAAGG
CATAGTCGGTAAACTTAACCAAGcatgttaatttttatttttcatacatG
TTTCGATTTAATAATCATCATCAGTGTTTTTAGTTCTAAAAATAGATAAA
TGTGTCACTTTGTCAATAGTATGATCCTGGTTGAAGACGACGTTCGTGTA
AAGGTTTGTGTTGTGGAGAACGGGTGTAGCAAAGTACACGTATAACGCAC
CACTTGGCAGTTGTAAGTTATATTATTTGCTGGATACATAATGTATTTGT
TGTCTTTAGGTTTGTTTGGGCTTGCTGAGGGGTTAGGTCTGTGTAAACTT
GCTTTAGGAAGATGATGTCGTGTTTCGACTGCATTTTTACCCTTATTTCA
AATGATTACTAGTATGTCGCTACACCCATGTCTCATCTCAGTATTGTACA
TCTGTACATATCACATTACTGTATCCTTTTAAGACTGAGATTTCTGAACG
GAACACAGGCCCAGCGGAAGCGGGAAGACTTaggagccttcagcctcccc
actttaaaCCTTGAAGGGTTGTTCCACTGNCCCAGCGGAAGCGGGAAGAC
TGaggagccttcagcctccccactttaaaCCTTGAAGGGTTGTTCCGCTG
GGCCTGGAATAGGAATATGGGCACTGATACATGAGTAAGATGGGAGATTA
AAGcataatacacttttttataagaaaaattttataagaacaatgaggct
cgaAATTGccacaaaataagaacaatactgagcctggaattactcaattt
caagcaatttaggggtcagaTTAGTAAAAATtggatacatgtttttttat
aagagcatccaaaatttttgaagcctgcgaatgaactttttgagttttaa
gcctataaatgttcttaacatgttcttattttgaccattttgttagtatt
tttgaccattttcctaagaaatagggtgttttttagtctacaaagccttg
aaatgttcttaacttgttcttaacattttggccatcgaagccttatgttc
ttatatagtttgttcttataaaaaagtatacTGTAACGCTTAAAACACCT
CAATTACATCTTACaaaacaggataagaacaatttgaggctcaaagtgcc
aaaaaataagaacagccgagcctcagccaaattttactggttcttataaa
agaaagtgtaCAGCACACCAATGGTGATTTGGAATCATTTAGTGTTGGCT
GGGATTGCCTTTAATTAGTATATCTAAAAGGTATTAGTACCAGAACTCCA
AAGACCCGTGAGATAATAatttagttttaaaaacagtTTCAGGAATTTGA
TCGGAAATGTAAAAATTTCACCTCCGTAAAAAGCGGTTGTTTACTCAGTc
agttaaaagttttgtttatacaagaatattttaaatattttctttgatat
ATGCAGTTTATAATTCAGTATAATGGTCAAATCGTGggaaaattgcttaa
aataacATAATCACTCACCCATTTTACATATTCTATAGTTCAGTGCGctt
tttttgttaaataaaaGATTACAGGAAGCGAATAGGGTGTAACTATGGTA
AATTGGTCTTTGATGGAAAGGCTTTTGCCGATCAAAAACAGCCATACACA
CATTGagtaaaagaaataaaaagtaaaagttaaATAATTCGTTATTGTGA
ATATATTCATCGATTAAATAATTtaacaaaaaaggtttttcgttctcatt
ttttttataattttgatcaTAGTAACTCATTGTAAGGGTTCTCGAAAATG
CGATGAGAATGTTTTTAAGAAAACGCGTAATAAAGCAGTAGCGACACTGT
AATTAGGTGAATAGATGCGGTTCTTGATTTCATGATGGTCCCTAAATATA
TTTTAGGAAAAACTATACAAAATGATACGAGTCTTGGTTGGGTAAACCAA
AGTATTCTAAACATTTCCATAGTGACCTCTtttcagaaaaacatttttta
ataacaCAGTACGCAATCTTTATCCATATCTTATTGTACCTGTTAAGAGC
ATGCTAAAAATTAGCTTGTCGACAGAGGCGAAAAATGCCGAAAACTCGCG
AATTTTAGCTCTTCATTGCGCTCTTGAAGGCTCTGTCTCCTATTCTTGTT
TGCACGTCCTTCTTAAGTAAACTTTAGGTAAAGAAAAACGACACTGCACT
TCTtgtaaaaaagcggttttctgtAACTCATATAATAAACactaaaaaca
atttttttattctagTCTTTGCTTAAAGCGCGGCTAACAATAGAGAAGCA
AAGTACTTTAAcacattcgaaaaaaaaagttcggTTAGTTAAGTCCTGTG
TTTGCTATTGCATAGAGTTTGCCGACCGACAGTTTTCTCTCTTTCTATCT
CATATAAGAAGGGAGATGTGGTTTCAGAGTAtaggtttgagatttttttt
gtcTAGCTCCTACAAATTACCGTTTTTAATTAATTATAACAAGGAGAAGA
GAAAAGAACGCTTTCTTTCGCACATGTGCTAAATCTTATTGTTAGTAGAT
ATATGATAACAATAATGTCTTCTCCTATTGGTGCGGTTTCTCCTCATCGC
GCAATCTGATTGGTGCGGCTTTGAACAAAAGAAGTGACGTCGAGAGGTTA
CTACATAGCAAATAAACCGCTAGTGAGATCGGTTTCTTTGATGTACTATG
AAAAGCTAACAGACGTTCAAAGTTTTATATATATCTTTGCTGGGTGCCGT
GTAGCAGAGAGAGAGGAGATTTTTTATGTAGAGGATTCAGGCGAAAGATg
aatataataataacaatactAATAAAAAAGTAAGAGAGAGAGAAAAGAGT
TGAAGTGAagcagagagagagagagaatatATACACGAGAATTTGGTTTT
GTTGTGAGGGTTGTGAGCATGTAGTTATACATGTATTATATGAAAGGTCN
GAGAGAATATATACACGAAAATTTGGTTTTGTTGTGAGCATGTAGTTATA
CATGTATTATATGAGAGGTCGATATtacattttgtgcttgttgttGTTct
gcattttattttcataaaatatactGATAGATCCTCTAGCTACTTGATAT
TAAGCTTTTGGTAAAATGATACGATATGGATTGTATGTTTTGAGTGTATG
TATGTGTATACATgtaattttatttcaaacaaagataatacaaatttcaa
ttttttgcactGCAAAACACTGACATAATCCTAGTCAAGTCAACAAAGAA
AGGTTTGAAATCTCAAGAGGTTACCTTGCCAAATGATTAGAGAAGAGAGA
GAGAAGAAAAATACATGATATCAATTTGTTATACGGATGCTTCATAGAGT
TTGAAAATTATAATCACACAAAATGGATAGATATAATTGAACAATTAGAT
GgcttttttgatgttgtttaTGATGGCTCGTCAACTGAAAGTCATCATTT
TGTTCTGTGTTTTGTTTTGTGGATAGCCGCTGAGAATTGGTTACTGTTAC
TTAGGGAGAACTAGctataaagaaagaaatttcaaaagttgaTGATTTTA
TAAAAGTTTGCAAACTCAACACGGTAAATCACTTACCGAGAAATTGAACA
AGCCTTGAAACGATTTCAACGATTGAAAGAAACCAGAAAGGAACATACCA
GCTAAGGGTTGAATTTTCTATTACATTTGTTGTTATAGGGTATGGTTTTG
TTGTGGCTTCGCTTTTCGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGGAT
GGAACCCAAAGAtgaaagaagccattgtagtgcaatgtttacatttttgg
aaagttctaAAATGGTAGAAGAAGCTCTGTAAATAAAAATTAGACTCTTT
TACGTGTTGTGTCGTTCACCACGTTGAGTTGAATTGGTTGGTTATATTTT
AAAGGCTTGATTCATACTTTTGCTTTGATACATTTGATTCTCAATATCAA
CGTCATACTTTGAAGTTCTGTTTATCCTCTCAGTTAGTATATTTTAAGTT
CACCTCTGATTGGATATATAAACACTGCCTCGAAAGACAACAGGAAACAT
ATGATTATGAATGAAGGGTAGTGTTTTATAGGTAGTAGAACCTAGAGGTG
ccttgtttttcatttgtttcatacTTCAATTGGTAATTTTAGTGATTGCT
AAAGTATTTGGAGAAGCATTTGCTCTCTGACTGGATGAGGTGCTCTGCAT
TGTGGTGGTGGCGCACAAAcaatttttagtaaaaaaaccATTCCTTTCAT
CTTTTAGtgaatagaaaaagaaagtagcATTACATGAATCAAAATGACAG
AAATGGTTATCATGCCAACAGATGAACGTATCCCACCGATGGGATCAGAA
GCTGCAGATACACACTTCAATGAAACTGCTGCATACGATCCTAAATTAAA
TACAAGAGACTTATCACATAATAATAACAAACAATGTATTCCTCATTACG
AACATTGGAAGGACAGCTTACCAGATCTATTAGATGACACAGAaggatat
aaattattttacgAATTTCTAGAGCAAGATAAAAGTATCACGTTATTTGA
ATGTTGGTATTGCTGCAATCAATATCGTAACTTGCCACCAACTAGAACTA
GTGCCAAAGACATTTATCATAGATTTGTAAAGAAAAAGGACCCACATATT
CCAATTTCTGAtcaagcaagaaataatttggtATTGAGGATAAAGGCTAA
CGATATTACAGAAAAAATTTATGAGGAAATTGAAAAGGAAGTTTACACTA
ATTTAAGGGACAtttgttatccaaaatttttaaaatcagactGTTTTAAT
CAATATTGCGAAAGTTCTGGTCAAATGCGGTATGCAGAATATAATACCGA
TTATGGAAAGCCATCAACAAAATATAGTGGAGTCCTTGATCACATTGACA
AGCATGACCAGTATCAACCTCAATCAAGATCAGAGTAAGTATACCTTGTT
TAATAAACAATTTTTGGAAGGTTCAAGGCTCCAATTACATCCATTAGAGT
TTCTTCTCATTGATATAAAGTCAGGAGGAATCAGAGAAATTGTAATACAA
TAGGGATGAGCATACACCTTTTCTTATAACAACAATTTACAGAAAATGTG
ACTCAGTCTCATTTGTTATTGCAACAgaatttcagcctgaaatgaaaaaa
taactaGCTAGAGGCACATTCTAAATTTCATGGTTTTCACAAAAAGAAAT
CTgcatcatgaatatttttgaattaagaagaccagatattttcaaaaata
tcaatatgaCAACAAGTTGCATACTTTGCAATCTTTATAATCAAAACAGC
ATTCCTTTTCTTTGAAGAATACAACATTGATATTCTGTAATTTCCTTGCT
TTTATACAGATCTAATAGCTTTTCACGACGGTGCCTGAGGATGTAAAGAG
AGACTACATTGATTCCTCTCATAGCAGGAGAACACTTTAGTTTATATAAG
GACAGTAatgtttttaaggttttttaagaattcttttaaactggcacctt
taaaactttattttccAGGATGTTTTACTTTTAAGCTTTATTCTATGATG
ATTGCTTTgaatttatgttgttttttgaaCTGTTCTCTTTCTCAATCTTC
AAAAGCTTACGACGCCATTGTTTCATAGAGAGATCAAATTAGTATCAATT
ATGAGCAAAGCTTCAAAAAGAGATTCGGTTTTTTTTATTGCCGGTATGTA
ATAatcaaagataaagaaaaaacatagAATAGGATcatgtagaatttttt
ttcttttttaccaaATTGCCGTTTCCTTTTCACTGCAATTTTGGCTTAGG
GAAAATATGTCGTTACTACAGGTCTAAATGGAACTTTTTTGTTCATGTAA
TTTCTGATGACTAAAGATTACCATATTCAGAATATTTTTGGTACTAATAA
CTTTAGGTACTGAATTTTACAGTATGTAAGGCTTCCTCTTCTAATTGACA
ATTCATATATATTTCCAAAAAGATatagaaatgaagaaaataccCTGAGA
AGTTGATAATGACAAAATTCCTTTTGAACTATGATATATATAATCATGTT
TCATTccctttattttcttatttttcattttttggttatcttttttattt
cagttcaaaatttttcttgaaaatctttttccacAAGTAGATGGTAGAAA
GAAAgtttttccttttctctttttttttaatcatcaaaATTCCCCTCTCT
ATTCAACAATTCCTTTATGTTGTTGTGATACTCAAcgctttatacttttt
tttcatattttgcgataatgtctttttcttttcttgtgtCCTACTTGTTT
ACATTACACACCAATATTTATCAcataaaaggaaagaaaaacttAACCTT
GCATTCCGGTGTAATACAGCCCTTAAAGTCGCCTGTCACTACCCTGTTAT
ACTATTTATCATTTGATGTTATGTTgctgtttctctttttttaatgaatt
tttttttcttcccctctatgttatgtttttctttcttttcactcagcata
aacgtttcttataagaacaaagtatataagaacattacatttcaaggtaa
aaaatattaagaaaattctaagaacattttaaaacactTTACAAACCCTA
ACATGCAATATCTTAGGAAATTACactaaagcactttgaaatgtTTGCAa
tttgctgaaaataagaatatttcatattaatgttcttatagaaaTAACGT
GTACAATTTCTCAGTGTGTTTTCCTTTCACGGTTAAAAGCCTCTCTGTAT
CGATTGGACCGCTTCCATCAAAAGACTTCGCACTAAATTACATGAAACTT
TGTTTCAATCATAataaaagaacaacaaaaaatatTCCTTGATGGATTGC
AGCCACCTCATTATTACAATCAAAACCAATATTAATATACtcctttgaaa
attaattttaaaaattttccctttttttctctttacagtTATGAAAGGCA
GTATGAATGCGCCCGTCATCCACACCACGATCGAGTTCACGGACCCTCAT
CCAATTATGACGATCATCATAGCATGCCGTCAGATTATGATCGTAGCTCT
ATAACAGATTCCAAAACTTCCATGTAAGATTAACTCTAATATTTCTTTTT
CGGCATAAATTGGAATCTTATAATGTATATGTCCTTAGTTTTCTGAAACC
ATTGGCTATCAGTTCCCAATAGTTTAACCTAATTATTTCCACTTTTTAAA
TGCCTCTAAAGCCtatgtttttcaaaactctATTTAGTAAAgtactttct
ttttttatttagggGATCAAGTAGTCGACACGGTAGACCGTCTCGAGGTC
ACAATCGCGATTACGATGGACCAATGGACGTTAACAATTTCAAGCCGgta
agattttatttaaaatttcttcattacaAGTCCGAACTTGATTCAAAGTA
ATCAAAGAACAGTTCTTTTAAACGATAAATCAATGATATAATATAACTGG
GAACCTTTGGAATGTTTCTTTAATCTTCGGCAAAAAGAGAGGGATAAGTT
GTTGATACAAGCGTAACCCTTGGTTCCCATCTGATCTTATTGTGAGGCTT
GAGTAGGTCCCCTGCTGTTCGAACAGACAACATTCGCTTTGGTATGAAAT
ATTCGATGCTTATTAGCACCCATTTTCGTTGTTTTGTTTCATATTCAGCG
TTTTTTTCTAACATTCGTGTCACTGAACTCGAACTCATTAAGAGCAATAA
CCTCGTTttcttaaacatttttttttttgtgttattGTTGTCTAGGATTT
TTACTTAGGCTTTATAGTACCGTTCTGTTtcttaaacgtttttttatata
ataaggACTCATAAACGCCAAATTGCACACAAATTACTCCCAATATGAtg
gtgaaaattaaaacattttaacaACAATTTCGGCTTAAAACTcataaagt
taagaacatcgagGGCTTAGAAAATTTgtacgttcttataaaaaatcatt
tatgcCGTGTATTAAGACTTTAAGGTAGCCTGCTGCGAAAGTGGATCACA
gtgcttgttttcaaaaattctctTTGTGTTGGAATTCCCTGTTCTATCTT
TTGTATTCTGTGCGTGCCTTATGTTTTTCATCTAACACCGAGAGAgcaga
aaaatgtttttataagaactagacAATTTTGGCTGAGGCTGAGACTCGGA
TGAGGCTGTTTTTATCATTTCGTGATTTTGGttcaaatgtttttgaaatg
gtctaaaaaatactttttctagCCATATTTGACAGTTGAGATTGGCATAT
TATTTTTAGGTTATTGATAAAAAtcaagcctcatgttcttataaaaaacg
tgaaaGATAGAGTCACTTTGCTTGTACATAGATGAAAGAGCTCCCTTCAC
CGTAAGCTTAATCTTGTTTCTCTGTACGCGCTGATGCGCTTTTCGAATAA
GTCTCGATTTGAATCAACTATAACAATTTTGTCCCCTTTTCTtgagtttt
ataagaacaatgtatATTGTAAATAACCGAAGTCAAGTATATTTCCCCCT
CCtttttaatgttcttataaagaattgAAGATGTACTATTAGAGCCTTCT
CGTAAGGCTAGTACGCTAATGAAATTATATTCAGAAAACATCAAACAGAA
TAATTTTGTATCCAACACTATACTTCTTAAAACTTttcttaatgtttttt
cttcttaaaaaatcTTACTTGAAAgagatgtttttaaaaatacattGCCG
ACTCAAGAGACTCAAGACCGCTCTTATATAAGATTACGAGTCCGCAAAAA
TTGTCTTTACTTGCGTTTTCTTGTTGAACGTAACTGTAGcgcatttttct
tctttcttttaccTTATTAAGATTGTCAAAGAACATTTTTCCCGCCCGTC
CCGTCCCTTTCATTTTCNAACTGTAGcgcatttttcttctttcttttacc
TTATTAAGATTGTCAAAGAACATTTTTCCCGCGCGTCCCGTCCCTTTCAT
TTTCATAGCTTTTTCCCAATTCTTTAAACCTCTCTTTACCGAATTTcctc
ttttaatttttaaaggaCCTTAAAAGAGAATGCGCTAATATTTCTATTTC
TTCGTTTATGACTCtttataaattaaattggatgaGTAAAGAAGTTTTAT
TTCTTTCCTGGCCATAAGCCCTTCCAATACTGAAAAGTTCCTTTTGCTAA
GTAAACCTAAGCGCTTAGGCCCATAATTCTATATAATACCCATCTAGCAT
CAATTTGCTGTGAGATTTTATAGCCATAGCATAACATTTCTtatctttta
aaagattttgtttttatgttaATAAGCTGTAGAAGCTGTCTTGAAACCAT
AACAAAATTTGTGTGTCGGTATGTCTTGTGCATTATGAGCCgtgatagaa
aaaaataaatctttaaaaaacattgtttcaacgttcaaacTAAATCCATT
AAAAGAcgttccatatttctttttactCAAACACACTCAAAAATATGGTT
TTATTTTGCCTGTGATGACTTTTTTACGAATAATTTCATGCTTATACGCA
AAAGATTAAGCAGGTTTAGAACCCCCAAAAGTCGCCcgtcttaaaaaaaa
ttgatttctcaattacaaaaaagaaatttgtaacAAGATCTAAATTCGCT
AGTCTATTAACAAATTGATATGCCGACTCTTAAAACACGTGCaccttttt
ttaagaaatttctcTGCTACGAGAAAAAACCCCtacatattttgtttttg
ttatcaAATAGTCGCTCACAAAAACATTATGAAAAATAAGttcaaaaaat
gtataatttgatATCGTAAAGTCACTGGGCCGACAAACCGATTTTAAGAA
CACCGTCATTTTCATAAACAATAATTTTTTGCATCGCATTCTTTTCATCC
TTGTTAAAAACGTTACGGTATTTCTTGCATACCTTTTGGACTTTTCGGAA
ATTAAACCATATTGATGCAGTTTTCTTGGGaggaaaagtattttttaaac
atgGTATCAAACATTGGGGTCAGTCTTTCGATGACTACCATTAGTGTAAG
ATAAATTTTCTCGTGTAGCTTCCAGACCATAGCAACTGTACTGTAGACTA
TAGTTCGTGNGCGACACGGTGGCTCAGAACACGGTTTTTATCCACACAGT
AGTAATAGTAACTCTTATAATTATTCCAATGATACAATACAAGACCGATA
CAATACAATGTCGTCATCATCTCACCAACGTGGTTCCTCGCGCACGCGTG
AAACGCACCCGCATCCAGATGCTGCACCACCATTAGACACTAGTAAAATT
TATTCTTGGATGGAGAAAAANGTGTAGCTTCCAGACCATAGCAACTGTAC
TGTAGACTGTAGTTCGTGTCTTTTTGCCGCTGTCTCGTTTCATACATACA
AAACACTTGATGGAGACTACTttgaatataataaaaaaattttccgaaat
tattttatttcttcttctttctttattATTAGCCTGGTATATAatctctc
ttttctttttctcttttaacaGCGTACGCAGCGAATCAATCAAGATCGCA
TGAAACCGATGAAACCGACAGACTTTGCTGCACTTTTGAcgcaaaaactt
gaaaaagtttTGATCGACCGAACTAGAGATGGCCATGATAATTCGGTAAG
TGATTCTATAACAATCCTTATTTCTATCGTATCCTAACCGTATGAACTTC
ATGGATGAGTGTAAAGAATTCAATGTTTAAACTATATAAATTgtaataaa
tctttttcaactttttttcaatatatgaCTGTTCACTCTGAAAATTTACT
TCGTTTTAGTTTCATTTCTTTATTTCGAGTTTTGCTGACCTGTCTTATAt
cattcttttcttttataGTCACACCATTCTCATGGTGACTCAATGGATCT
GTCTTCAATGAAACATCATCTACCAGGTGGACACAACAGTCGAGTACCAC
CCCACCATCAACCTCACATACACGATTTCGATGGCCAGAGTGAGAGTGAC
GCCCAATCTTGGGTGCTCTCTGACCGGCCAAGCGTCGCCGGACAATCATC
ACATAGTGGCTCACACAGTggtattttaatgaaaaataaagcaaaagaaC
TCAGAGATAAAATTCATCATCATATTCGAAGTGACTTGAAAGAATGTCGT
TGTGCTGAGTGCCGCCTCACGCCCTCCGTACATTCGGGCGGTCGTCACGA
ACACGATTCGCATGCACGACACGGTGGCTCAGAACATGGTTTTTATCCAC
ACAGTAGTAATAGTAACTCTTATAATTATTCCAATGATACAATACAAGAC
CGATACAATACAATGTCGTCATCATCTCACCATCGTGGTTCCTCGCGCAC
GCGTGAAACGCACCCGCATCCAGATGCTGCACCACCATTAGACACTAGTA
AAATTTATTCTTGGATGGAGAAAAACGAACGTTACCAACATCAAAAATCG
TACCCAGACCCCTCCCCGTCACCTTCTTTACGTCGAAAGAAAGCACCTAT
ACAATATAACACAAGTAGGTCACAGAACTCTCAACAGCCTATTGCGCAAG
ATACGGGCATGCCGTTATTACCACAACCTGACCCAGACAATGTTTTACAA
GAGGTTAAACGGAAACTGGAAGAACCCTCACGATCACAACAAAATCATCA
CCGATCTTCaagacaacaacaacaatatcATACGCCCCATTATGAGGGCG
GATACCACCCTCATCACGATAATCAATCAATGGCTTCTGCTCCTTGGTCG
ATGTCTGATAACTCTTCAATTATTTCTTATAACCCTTCACAAGTTTCTAC
CGTACCTTCATCTGCGTCTAGATTATGGAACGCTCAAGGTTATTACAAAG
ATGCCGGTAGTGAAGTCAGAGACGATCGTTGCACGCCTAGCGAAGTTCAC
TCGCAAGCAGCTTCTAAACACAGCGGTCCGCGTAGCGTGACACGTAGTGA
TCATATGAGCGCTGCACGCAGTGATCATCACAGTGACGTAAGATCACAAT
CGACGGGAATTAGTTACGGCAGTGACGGTAGTAAAGGACGTTCTTCTTCt
tctaaaaataaaactgtTATCACGTATTATTACGGTAGTGAACCTATCCC
GTACCGTATTAGCGTTCCGACTACGGAGGTTACGTTGTCACAATTCAAAC
TCGAAACCAAACGTGGTAATTATCGCTTTTTTTTCAAGACTGTTTCCAGT
GTCGATGGTGAGGTTGTTTGGGAAGAATTCAAAAACGATGATGATGTCCT
ACCTAAATTTAATGATAAAATTGTTGGCAAAGTCGATAAGATCTAATTGA
CTTTGGTTTTTGGATTTATTTGTTGTTATTGTTTGGATTATTTCTCTTAA
TGATAATCATGACGGAATTGTTGTTAATGTGGACCAAGTTTTGATTCTAC
CATAATGAACTTATaatatttatgacgtaatgttttaaacAGAAGCACCC
TAAAAGACCAAACAGCCGGTCTAATTTTGAATTAAACAATAAACTAGGCC
CTGGCTATTTTGGGTGCTTGCGTCTGAAAAATTCCGACATGAATGATTGA
TCATGAATTGATAAATgcgttgtttttttatatagaTCCTCGTGTTaatg
attacgtcatgaatattattGTCCGCTTGGTTATATTATCactgtctttt
ttttttcaaatttatgctCTGCATTTAAAACTTTATCACTATTTATATTT
TGCCAATTCTTCTACCCCTGTTTGATACCCCTAAatatttgttcaatttt
ttaccTTCCTCGTACAGGTTCGGGAatcgaaattcattttgacaaatttg
aactttttgccaAGTGTCAAGATATTCTTTCCTTGCTTACTCTTGGCTTT
ACCTTTCCAACTTTCTTCCTTTTTCCTTTTATATTCCttcctaaattttt
taaaatagatattttacaattttctccCTTTAAGTTAATATACAATATAC
TGAAaagagttttattttttactagATTTATCTTACTACCCCATGATTGT
ATGATATTTTAAGATAAACCCCGAAATATACCCCTTTATAATTACACCCC
AATATtgtgaaaaaatgaaataatatcaaaaaatacaacaaaaggaaaaa
tgtgaaaattaacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011804XLOC_011804Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021042-exon-sc0000377-1491911889:136750..136834TCONS_00021042-exon-sc0000377-1491911889:136750..136834Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:136750..136834TCONS_00021042-exon-sc0000377-1510915933:136750..136834Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:136750..136834TCONS_00021042-exon-sc0000377-1575043694:136750..136834Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1491911889:137069..137161TCONS_00021042-exon-sc0000377-1491911889:137069..137161Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:137069..137161TCONS_00021042-exon-sc0000377-1510915933:137069..137161Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:137069..137161TCONS_00021042-exon-sc0000377-1575043694:137069..137161Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1491911889:140588..140785TCONS_00021042-exon-sc0000377-1491911889:140588..140785Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:140588..140785TCONS_00021042-exon-sc0000377-1510915933:140588..140785Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:140588..140785TCONS_00021042-exon-sc0000377-1575043694:140588..140785Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1491911889:141157..141833TCONS_00021042-exon-sc0000377-1491911889:141157..141833Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:141157..141833TCONS_00021042-exon-sc0000377-1510915933:141157..141833Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:141157..141833TCONS_00021042-exon-sc0000377-1575043694:141157..141833Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1491911889:143838..143972TCONS_00021042-exon-sc0000377-1491911889:143838..143972Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:143838..143972TCONS_00021042-exon-sc0000377-1510915933:143838..143972Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:143838..143972TCONS_00021042-exon-sc0000377-1575043694:143838..143972Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1491911889:144162..144246TCONS_00021042-exon-sc0000377-1491911889:144162..144246Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:144162..144246TCONS_00021042-exon-sc0000377-1510915933:144162..144246Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:144162..144246TCONS_00021042-exon-sc0000377-1575043694:144162..144246Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1491911889:147372..147494TCONS_00021042-exon-sc0000377-1491911889:147372..147494Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:147372..147494TCONS_00021042-exon-sc0000377-1510915933:147372..147494Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:147372..147494TCONS_00021042-exon-sc0000377-1575043694:147372..147494Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1491911889:147718..149964TCONS_00021042-exon-sc0000377-1491911889:147718..149964Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1510915933:147718..149964TCONS_00021042-exon-sc0000377-1510915933:147718..149964Clytia hemisphaericaexon
TCONS_00021042-exon-sc0000377-1575043694:147718..149964TCONS_00021042-exon-sc0000377-1575043694:147718..149964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:136750..149964 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0937252	0.900311	3.88094	3.23301	4.98715	4.98073	1.15782	4.98639	1.5342	1.7987	0	0	1.98627	1.38331	4.72074	1.65783	0	2.269	0	4.54048e-08	4.22431	2.55815	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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