TCONS_00021011 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021011
Unique NameTCONS_00021011
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2489

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021011 ID=TCONS_00021011|Name=TCONS_00021011|organism=Clytia hemisphaerica|type=transcript|length=2489bp
AGCGTATGAATCAAAATTTACCCCCGTTTTAGAAgcattcgatttttttc
cttTCAGCAGATTCGGCAACGTTTTCGGCGGTCTTCATTTTTGGTGCTTG
CCATTCTGGTCAGTCAGTAGAATTAAAGTATGGCTACAAATTCAATAGAC
AGCTCAATTGCTGTTGCAGGAACTGCTGAAGACCTGAACAATCACAATGT
TCCTGTAAATCAACCAGATTCTGATTCAGTAATTCTTAGATGCAACCAAA
CCTTGAAGCTCGAGACAGCTATAGAAATCTTGAATAACACTGACCAATAC
AAAGTGATAAATAAAGTTCCAGAGAACCCAAAAGGAGGAGACACATATTT
GCTGATACCTGCTCAAAAAGATGAtgATGCTTGGAAGAACGATGGCTACA
GATGGTGTCACTATGGACCAAAACTTGTCCCAGGAAAAAGTCCTTTGGTT
CAAAAACGATACTATGCTGCTTACATGAGTAATGGCAAAGTTTCCAAATT
TCACAAGAACGTTTACCAACTAATCAACGATGATCGCGAACGTATACCTG
TTGTAGTCCATTATTTTGGTGATCACTCCATTGCTGCCACAAGAGACACA
AAAGGAAAAGACGTGAAAGGTTTCGAAAATGGTGCTGGTGGAAACGTCTC
TAATGAACATCAATACTCCAAATTTGATGGCactgataaaaaattaacag
tCCATAGAGCAGTGAAACCTAAGAACATTAAGAAATGTATTTTATCCAAA
GACGACTTTCAAGAACTTCATCGTTTATCTTACGGTCTGGGCTCTTATGT
CAAACTTATCTCTCACTATCCTGACCTCATCATCGTCTTTGGCATGAGAG
AAATATCCGACGACTTAGAAAACATTTTGAAGTTGAATCAAGAGCCACGT
CCGTTGTTTTCCTATAGTAATTCGTACGAGTTGGGCGAATACATCGTCTC
AACATTCTTATACACCCACCCAGCATTTTTAGAACGTCCAACCATACCCT
CGCATTTTGTCATTCACGAGAAAAGCTGTGGTTTGGCTCACCAAGAAATG
TGTAGAATCCTTTCTCAAATGGTACCAAGCCTTGCTGCAAGTTCAAACCC
GGTGGTTCTCAATCTTGACCCAAACAAATTTTCGGCAGTCAGCACTGTTT
TCCCAAACATGCACACGTTGTTTTCATGGAAGGATGTTATCGCCAACACC
AAAGCATGGTTATACGCTAATGGGGCCAGCCAACAAGAGGTGACGGTTTA
CATCGAAGATCTTCGACAGCTCTTCTCAaggaaatctaaagaaatttaCG
AAGAAGCTTTAGCGGAATGCAAAACTCGTTGGCACGGTTTCTTTGAAGAG
TATTACATGAAGGAAATCCACGAAGTTGTCAACGATCGTTTAGGTAGATG
GGCGTTGGAGAAATGGAATGTTTATAATCCGTATACTGGCGTCACGGATA
AAAGCAATGAAGGAATGGAGGTCGTTATTCGTCAGTTGAAGATCTCTGGA
AACACACCAGTTCATTCGACTGTCCTATCGTTATGCTTGTTACAACGTTG
GTTGCATAGTGAGATTTGGAAGAGTTACTGTGGAGTCGGCCCGTACACAG
TGCGCACGGAATTCCAACCACTCCAAAGATCTGTATCCGAGTTTACGCAA
CCCACCACTCCTTGTCCACCCGATCAGATTTTGTTCTATATTCAAAACAA
ACGAGCTTTGATCGCTGAGGGTATTTTGAAAGAGGACAGCACAAATTCAG
AATTGAAAGCTAACCTACAACAAACGGCAACTCAACTTGTCAAAGCCGGT
GCTATTACGATGAACAGTAAACAACAAACTTTTACGATCAAAGCTAACCC
TGTCACATATTACGAAGTCAAGTTATTCCCAAAGATCTCATGCTCGTGTG
AGGATATGAGGAGCGGACTGTGCGCTCATGTTTTAGCCGTCAAAATGAGT
TTGGGGATCAATATCGAGGATGATCTGCGTAAATATCAACCCCAACGTGG
TTTGAAAGCTGGTGAAACCATTAAAGCCATTAAAAAACTGAAGCGCGAGA
ACAGCATGGAGCCTGTCAACACTATTCAAATAAAACGTACCAAAGATGAT
CTGACAGGCGAAGAGTTATCCATTCAAAGTGCAGATATTATAACGGCGAC
CGAAAGCGACGTTGAGCGTGAACATGAGACGGTAGAAGCGGTAGAAGTCG
ATCCTAACTCAGAGGAAGCCCAACAACTTTTGCAAACAACCCTTGATGAA
GGACAANGGAAGTCGATCCTAACTCTGAGGAAGCCCAACAACTTTTGCAA
ACAACCCTTGATGAAGGACAAATACAACTTATGCAAATGGCTGCTGTCGG
TTTGAACATGTAAATCTTGTTGAGATAACTAAAAATTTTATAAGACTTTA
ATTTTCTTGTACCAtaatttttactttcttttgatCAATATAATCAGTTT
CAATAATGACGAACGACTTCAGAATTCATCTAATCAAAC
Run BLAST on NCBI

protein sequence of TCONS_00021011-protein

>TCONS_00021011-protein ID=TCONS_00021011-protein|Name=TCONS_00021011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=741bp
MATNSIDSSIAVAGTAEDLNNHNVPVNQPDSDSVILRCNQTLKLETAIEI
LNNTDQYKVINKVPENPKGGDTYLLIPAQKDDDAWKNDGYRWCHYGPKLV
PGKSPLVQKRYYAAYMSNGKVSKFHKNVYQLINDDRERIPVVVHYFGDHS
IAATRDTKGKDVKGFENGAGGNVSNEHQYSKFDGTDKKLTVHRAVKPKNI
KKCILSKDDFQELHRLSYGLGSYVKLISHYPDLIIVFGMREISDDLENIL
KLNQEPRPLFSYSNSYELGEYIVSTFLYTHPAFLERPTIPSHFVIHEKSC
GLAHQEMCRILSQMVPSLAASSNPVVLNLDPNKFSAVSTVFPNMHTLFSW
KDVIANTKAWLYANGASQQEVTVYIEDLRQLFSRKSKEIYEEALAECKTR
WHGFFEEYYMKEIHEVVNDRLGRWALEKWNVYNPYTGVTDKSNEGMEVVI
RQLKISGNTPVHSTVLSLCLLQRWLHSEIWKSYCGVGPYTVRTEFQPLQR
SVSEFTQPTTPCPPDQILFYIQNKRALIAEGILKEDSTNSELKANLQQTA
TQLVKAGAITMNSKQQTFTIKANPVTYYEVKLFPKISCSCEDMRSGLCAH
VLAVKMSLGINIEDDLRKYQPQRGLKAGETIKAIKKLKRENSMEPVNTIQ
IKRTKDDLTGEELSIQSADIITATESDVEREHETVEAVEVDPNSEEAQQL
LQTTLDEGQXKSILTLRKPNNFCKQPLMKDKYNLCKWLLSV
Run BLAST on NCBI

transcript from alignment at sc0000376:249993..255210-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021011 ID=TCONS_00021011|Name=TCONS_00021011|organism=Clytia hemisphaerica|type=transcript|length=5218bp|location=Sequence derived from alignment at sc0000376:249993..255210- (Clytia hemisphaerica)
AGCGTATGAATCAAAATTTACCCCCGTTTTAGAAGCATTCGATTTTTTTC CTTTCAGCAGATTCGGCAACGTTTTCGGCGGTCTTCATTTTTGGTGCTTG CCATTCTGGTCAGTCAGTAGAATTAAAGTATGGCTACAAATTCAATAGAC AGCTCAATTGCTGTTGCAGGAACTGCTGAAGACCTGAACAATCACAATGT TCCTGTAAATCAACCAGATTCTGATTCAGTAATTCTTAGATGCAACCAAA CCTTGAAGCTCGAGACAGCTATAGAAATCTTGAATAACACTGACCAATAC AAAGTGATAAATAAAGTTCCAGAGAACCCAAAAGGAGGAGACACATATTT GCTGATACCTGCTCAAAAAGATGATGGTAAACAATTTTTTTATATAATAT TATTCATTTATTTTAATAGATATGTTAAAATAACAAATTTATCTCATTTG TAGTCATTAGTTTTACAATCTTTATACTAACATTGTTTTGACTAAGATTA AACCTTCCAGTCTAACATTTATAGACAGGTTTCAATGTTTTGATTTTGTA CGGGCGGACTGATTTAGGCGGGCGATCGTGCTTGATTATTGGAGACAAAA AAATATAAGATTTATACCGTGAGTGGTTCTAAATCCGACAGCCCTGCCTA AATCCGACCCCCCAAATAACTGTTATGAAAAAAAATTCTATGTTTACAAA CATTCCCTCTCCAAGTTGAACAATAAACTATTGCCTGCAAGAACTCTTGA AACAAAACATCTAACAATATGACTATAATGTCAAGATGTCAATTAATGAG ATCAAAAACGTGTGAGTTGTAAAAATAATTATATACCTCTATTACCGTAA CTTGGTCTAATGTCGACATCCCTCGTCTAAATTCGACACCCTTTTCTAGA GCTGAAAATAGTAGAAAGATCAAAACTATTTTTCTTTGCTTAGTGGTAAG AGATGAATAATTCTTTTTCAATCACCGATTCCAAGTTTCATATTATTCCT ATCTCTAAAGAAGGGTGTCGAAATTAGAAGACAGATGTCGAGATTAGACC AAGTTACGGTACTCTGAATCCGTTGCTCGTGTTTAACGTTAACAATTCGG ACACTTTTGTATAAAAGCAATTATTGTTATTTGGTGGTTCAATTGGCAGA TTGGTTCAGTGTATCAGATTTCTCAGTTTAGTTGACACTTTGGTATCTTC GTTGCGTCACAGCGAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAA GACCCCATCGGATTTAGGCAGGGCTGTCGGATTTAGGACCACTCACGGTA TTGAGGCGAGTGAATATCAATCAAATTTTTGATAACTACTGTACCAGTCA TATCTCTTCGAAATTTGAATGGTGGTAAGTCTATATATAATATATATACC TCTGAGAAAATATACTAAAACTTCTTTTCAAAAGTCCTACCAGAGACTTC AATTTTGACAGACGTCAAAACAACAAATCTGCTTGCCTCCAGCTAATGCT ATGGTCTCTTTGCCTCCAAAAAATCAGGTGGTAATTCACGTGTGAGTAAG CAAATGACGTATCACGAAAGCCATATATATATATAAGATTCTGCTTACTT GTCTAGGATGGGGGACACTGACCTTGAAGGCCAATGGGGTTGTGCCCCTT GAGTTTGACCCTGTCAGATATAACATGAGAACCTGTCTTGGTATCTGAAT CTGTATACCTAGCAAGTGAGAGCTGAGAGTCCATTTTCAGAAGGCCTACC TTTTCAGACTAAACAACCAAATAGCTTATTTTATCGCTGCACTTACTTGT GACCATCAGATCAAAGAAACTTTTGGATTGTCAGATTCTTATCAACAGTT TAATGTGTTACTTGTGTAGGTGTTCGGCCGAAGTGCTCAGGTATAATTCT TGGTGAACCACGCATCTGTTTGATCAATCTCTTGAGAGAAAAGAATCTCC GCAGATATTTTTCATGTCAAGTATTGAATTTGAATTAGTTCTCCTGCACC CAGTATATCCATGAATTTGGGGTTCATCCGGGATCAAAAGTGAAACAGGC GAGTATTTTTAAATTTTTCAGTTGAAGTGTTTTTAAGTTTTGCATGCTCT TTGGCATTGCATTGAATAGTTTTGCACCTTGTACAGAAAGAGTGTAATCT CTAAGCTTGGATATCTGATTCTTGGAGATAAACAGGCTGAGCCGAGGATT TCATAAGCTTTTATACTGCTATTCACGTTAGGTATTATCCCTTCTAACAC CTTCCAAACATAGATGATGTGATAGCGTTCCCTTCTCCTTTGAAGGGAAT ATATTTTGGACTGCTTGAGACACTCTCAATAATTGTTTGAGGTACCTTTT ACCCATCTTAGAAAGGATTTTTGAATGTCTTCAAGTCTCTGAATAAGACC AACAGCAACAGTATTTGGACTCCATAAAACGGAGCAATATTCTAAAATTG GTATTACCAACGATTTGTAGAGTGTAGTCATACATTCAAATGACTGCATT GAAAAAGCTTCCTAATTAATATCCATGAAGTTTTTTGCTTTTTGAATGGT TGAAATTGTTTGTTCTTTAAACAAGCAATCGATTCCCAAATCTTTTGCAA AATTTTTGCTTTCAATGATATTGCCTGATGCTGATGTATTTTGGTTGTTT CTTTATGAAACAAATACTTGAAGATTTTAAACCTTTGTGAGCACAAACTT CTGGGAGGTCTAAAAATTGCAAAATTTAGGACATTTATTTTTGCAGATTT GACAATAAAATCTTTTGAAAACTTCGTGAATCAAGACATAAAGATGAAAT TTTTCACACAAAAAAATGGCTTAGAGGGACGTTTACTCAAATTGTATTTA AACTTTTGTCTTTTGGCTTATGGGGCAGACTAAAAAGTGACTTAAATCTT ACATTGAAATTTTAAGTTTTTTTGCAAACAGTTGCAAAAGGTCCCTTCAA GAATTTTCCAAAACATTTACTTTCTGTTACTTTCGCAAATTTTAGACATC ACATTTTTATCTTCCCTAATTAGTCTTATGGTCAATTTTCAGGTATTCCA GACCTGTCCAGACTGAGGATGCTCAACCAATTTGATCTGTTGTTTTTATT TCTAGATGCTTGGAAGAACGATGGCTACAGATGGTGTCACTATGGACCAA AACTTGTCCCAGGAAAAAGTCCTTTGGTTCAAAAACGATACTATGCTGCT TACATGAGTAATGGCAAAGTTTCCAAATTTCACAAGAACGTTTACCAACT AATCAACGATGATCGCGAACGTATACCTGTTGTAGTCCATTATTTTGGTG ATCACTCCATTGCTGCCACAAGAGACACAAAAGGAAAAGACGTGAAAGGT TTCGAAAATGGTGCTGGTGGAAACGTCTCTAATGAACATCAATACTCCAA ATTTGATGGCACTGATAAAAAATTAACAGTCCATAGAGCAGTGAAACCTA AGAACATTAAGAAATGTATTTTATCCAAAGACGACTTTCAAGAACTTCAT CGTTTATCTTACGGTCTGGGCTCTTATGTCAAACTTATCTCTCACTATCC TGACCTCATCATCGTCTTTGGCATGAGAGAAATATCCGACGACTTAGAAA ACATTTTGAAGTTGAATCAAGAGCCACGTCCGTTGTTTTCCTATAGTAAT TCGTACGAGTTGGGCGAATACATCGTCTCAACATTCTTATACACCCACCC AGCATTTTTAGAACGTCCAACCATACCCTCGCATTTTGTCATTCACGAGA AAAGCTGTGGTTTGGCTCACCAAGAAATGTGTAGAATCCTTTCTCAAATG GTACCAAGCCTTGCTGCAAGTTCAAACCCGGTGGTTCTCAATCTTGACCC AAACAAATTTTCGGCAGTCAGCACTGTTTTCCCAAACATGCACACGTTGT TTTCATGGAAGGATGTTATCGCCAACACCAAAGCATGGTTATACGCTAAT GGGGCCAGCCAACAAGAGGTGACGGTTTACATCGAAGATCTTCGACAGCT CTTCTCAAGGAAATCTAAAGAAATTTACGAAGAAGCTTTAGCGGAATGCA AAACTCGTTGGCACGGTTTCTTTGAAGAGTATTACATGAAGGAAATCCAC GAAGTTGTCAACGATCGTTTAGGTAGATGGGCGTTGGAGAAATGGAATGT TTATAATCCGTATACTGGCGTCACGGATAAAAGCAATGAAGGAATGGAGG TCGTTATTCGTCAGTTGAAGATCTCTGGAAACACACCAGTTCATTCGACT GTCCTATCGTTATGCTTGTTACAACGTTGGTTGCATAGTGAGATTTGGAA GAGTTACTGTGGAGTCGGCCCGTACACAGTGCGCACGGAATTCCAACCAC TCCAAAGATCTGTATCCGAGTTTACGCAACCCACCACTCCTTGTCCACCC GATCAGATTTTGTTCTATATTCAAAACAAACGAGCTTTGATCGCTGAGGG TATTTTGAAAGAGGACAGCACAAATTCAGAATTGAAAGCTAACCTACAAC AAACGGCAACTCAACTTGTCAAAGCCGGTGCTATTACGATGAACAGTAAA CAACAAACTTTTACGATCAAAGCTAACCCTGTCACATATTACGAAGTCAA GTTATTCCCAAAGATCTCATGCTCGTGTGAGGATATGAGGAGCGGACTGT GCGCTCATGTTTTAGCCGTCAAAATGAGTTTGGGGATCAATATCGAGGAT GATCTGCGTAAATATCAACCCCAACGTGGTTTGAAAGCTGGTGAAACCAT TAAAGCCATTAAAAAACTGAAGCGCGAGAACAGCATGGAGCCTGTCAACA CTATTCAAATAAAACGTACCAAAGATGATCTGACAGGCGAAGAGTTATCC ATTCAAAGTGCAGATATTATAACGGCGACCGAAAGCGACGTTGAGCGTGA ACATGAGACGGTAGAAGCGGTAGAAGTCGATCCTAACTCAGAGGAAGCCC AACAACTTTTGCAAACAACCCTTGATGAAGGACAANGGAAGTCGATCCTA ACTCTGAGGAAGCCCAACAACTTTTGCAAACAACCCTTGATGAAGGACAA ATACAACTTATGCAAATGGCTGCTGTCGGTTTGAACATGTAAATCTTGTT GAGATAACTAAAAATTTTATAAGACTTTAATTTTCTTGTACCATAATTTT TACTTTCTTTTGATCAATATAATCAGTTTCAATAATGACGAACGACTTCA GAATTCATCTAATCAAAC

Coding sequence (CDS) from alignment at sc0000376:249993..255210-

>TCONS_00021011 ID=TCONS_00021011|Name=TCONS_00021011|organism=Clytia hemisphaerica|type=CDS|length=4452bp|location=Sequence derived from alignment at sc0000376:249993..255210- (Clytia hemisphaerica)
ATGCTTGGAAGAACGATGGCTACAGATGGTGTCACTATGGACCAAAACTT
GTCCCAGGAAAAAGTCCTTTGGTTCAAAAACGATACTATGCTGCTTACAT
GAGTAATGGCAAAGTTTCCAAATTTCACAAGAACGTTTACCAACTAATCA
ACGATGATCGCGAACGTATACCTGTTGTAGTCCATTATTTTGGTGATCAC
TCCATTGCTGCCACAAGAGACACAAAAGGAAAAGACGTGAAAGGTTTCGA
AAATGGTGCTGGTGGAAACGTCTCTAATGAACATCAATACTCCAAATTTG
ATGGCACTGATAAAAAATTAACAGTCCATAGAGCAGTGAAACCTAAGAAC
ATTAAGAAATGTATTTTATCCAAAGACGACTTTCAAGAACTTCATCGTTT
ATCTTACGGTCTGGGCTCTTATGTCAAACTTATCTCTCACTATCCTGACC
TCATCATCGTCTTTGGCATGAGAGAAATATCCGACGACTTAGAAAACATT
TTGAAGTTGAATCAAGAGCCACGTCCGTTGTTTTCCTATAGTAATTCGTA
CGAGTTGGGCGAATACATCGTCTCAACATTCTTATACACCCACCCAGCAT
TTTTAGAACGTCCAACCATACCCTCGCATTTTGTCATTCACGAGAAAAGC
TGTGGTTTGGCTCACCAAGAAATGTGTAGAATCCTTTCTCAAATGGTACC
AAGCCTTGCTGCAAGTTCAAACCCGGTGGTTCTCAATCTTGACCCAAACA
AATTTTCGGCAGTCAGCACTGTTTTCCCAAACATGCACACGTTGTTTTCA
TGGAAGGATGTTATCGCCAACACCAAAGCATGGTTATACGCTAATGGGGC
CAGCCAACAAGAGGTGACGGTTTACATCGAAGATCTTCGACAGCTCTTCT
CAAGGAAATCTAAAGAAATTTACGAAGAAGCTTTAGCGGAATGCAAAACT
CGTTGGCACGGTTTCTTTGAAGAGTATTACATGAAGGAAATCCACGAAGT
TGTCAACGATCGTTTAGGTAGATGGGCGTTGGAGAAATGGAATGTTTATA
ATCCGTATACTGGCGTCACGGATAAAAGCAATGAAGGAATGGAGGTCGTT
ATTCGTCAGTTGAAGATCTCTGGAAACACACCAGTTCATTCGACTGTCCT
ATCGTTATGCTTGTTACAACGTTGGTTGCATAGTGAGATTTGGAAGAGTT
ACTGTGGAGTCGGCCCGTACACAGTGCGCACGGAATTCCAACCACTCCAA
AGATCTGTATCCGAGTTTACGCAACCCACCACTCCTTGTCCACCCGATCA
GATTTTGTTCTATATTCAAAACAAACGAGCTTTGATCGCTGAGGGTATTT
TGAAAGAGGACAGCACAAATTCAGAATTGAAAGCTAACCTACAACAAACG
GCAACTCAACTTGTCAAAGCCGGTGCTATTACGATGAACAGTAAACAACA
AACTTTTACGATCAAAGCTAACCCTGTCACATATTACGAAGTCAAGTTAT
TCCCAAAGATCTCATGCTCGTGTGAGGATATGAGGAGCGGACTGTGCGCT
CATGTTTTAGCCGTCAAAATGAGTTTGGGGATCAATATCGAGGATGATCT
GCGTAAATATCAACCCCAACGTGGTTTGAAAGCTGGTGAAACCATTAAAG
CCATTAAAAAACTGAAGCGCGAGAACAGCATGGAGCCTGTCAACACTATT
CAAATAAAACGTACCAAAGATGATCTGACAGGCGAAGAGTTATCCATTCA
AAGTGCAGATATTATAACGGCGACCGAAAGCGACGTTGAGCGTGAACATG
AGACGGTAGAAGCGGTAGAAGTCGATCCTAACTCAGAGGAAGCCCAACAA
CTTTTGCAAACAACCCTTGATGAAGGACAANGGAAGTCGATCCTAACTCT
GAGGAAGCCCAACAACTTTTGCAAACAACCCTTGATGAAGGACAAATACA
ACTTATGCAAATGGCTGCTGTCGGTTTGAATGGCTACAAATTCAATAGAC
AGCTCAATTGCTGTTGCAGGAACTGCTGAAGACCTGAACAATCACAATGT
TCCTGTAAATCAACCAGATTCTGATTCAGTAATTCTTAGATGCAACCAAA
CCTTGAAGCTCGAGACAGCTATAGAAATCTTGAATAACACTGACCAATAC
AAAGTGATAAATAAAGTTCCAGAGAACCCAAAAGGAGGAGACACATATTT
GCTGATACCTGCTCAAAAAGATGATGATGCTTGGAAGAACGATGGCTACA
GATGGTGTCACTATGGACCAAAACTTGTCCCAGGAAAAAGTCCTTTGGTT
CAAAAACGATACTATGCTGCTTACATGAGTAATGGCAAAGTTTCCAAATT
TCACAAGAACGTTTACCAACTAATCAACGATGATCGCGAACGTATACCTG
TTGTAGTCCATTATTTTGGTGATCACTCCATTGCTGCCACAAGAGACACA
AAAGGAAAAGACGTGAAAGGTTTCGAAAATGGTGCTGGTGGAAACGTCTC
TAATGAACATCAATACTCCAAATTTGATGGCACTGATAAAAAATTAACAG
TCCATAGAGCAGTGAAACCTAAGAACATTAAGAAATGTATTTTATCCAAA
GACGACTTTCAAGAACTTCATCGTTTATCTTACGGTCTGGGCTCTTATGT
CAAACTTATCTCTCACTATCCTGACCTCATCATCGTCTTTGGCATGAGAG
AAATATCCGACGACTTAGAAAACATTTTGAAGTTGAATCAAGAGCCACGT
CCGTTGTTTTCCTATAGTAATTCGTACGAGTTGGGCGAATACATCGTCTC
AACATTCTTATACACCCACCCAGCATTTTTAGAACGTCCAACCATACCCT
CGCATTTTGTCATTCACGAGAAAAGCTGTGGTTTGGCTCACCAAGAAATG
TGTAGAATCCTTTCTCAAATGGTACCAAGCCTTGCTGCAAGTTCAAACCC
GGTGGTTCTCAATCTTGACCCAAACAAATTTTCGGCAGTCAGCACTGTTT
TCCCAAACATGCACACGTTGTTTTCATGGAAGGATGTTATCGCCAACACC
AAAGCATGGTTATACGCTAATGGGGCCAGCCAACAAGAGGTGACGGTTTA
CATCGAAGATCTTCGACAGCTCTTCTCAAGGAAATCTAAAGAAATTTACG
AAGAAGCTTTAGCGGAATGCAAAACTCGTTGGCACGGTTTCTTTGAAGAG
TATTACATGAAGGAAATCCACGAAGTTGTCAACGATCGTTTAGGTAGATG
GGCGTTGGAGAAATGGAATGTTTATAATCCGTATACTGGCGTCACGGATA
AAAGCAATGAAGGAATGGAGGTCGTTATTCGTCAGTTGAAGATCTCTGGA
AACACACCAGTTCATTCGACTGTCCTATCGTTATGCTTGTTACAACGTTG
GTTGCATAGTGAGATTTGGAAGAGTTACTGTGGAGTCGGCCCGTACACAG
TGCGCACGGAATTCCAACCACTCCAAAGATCTGTATCCGAGTTTACGCAA
CCCACCACTCCTTGTCCACCCGATCAGATTTTGTTCTATATTCAAAACAA
ACGAGCTTTGATCGCTGAGGGTATTTTGAAAGAGGACAGCACAAATTCAG
AATTGAAAGCTAACCTACAACAAACGGCAACTCAACTTGTCAAAGCCGGT
GCTATTACGATGAACAGTAAACAACAAACTTTTACGATCAAAGCTAACCC
TGTCACATATTACGAAGTCAAGTTATTCCCAAAGATCTCATGCTCGTGTG
AGGATATGAGGAGCGGACTGTGCGCTCATGTTTTAGCCGTCAAAATGAGT
TTGGGGATCAATATCGAGGATGATCTGCGTAAATATCAACCCCAACGTGG
TTTGAAAGCTGGTGAAACCATTAAAGCCATTAAAAAACTGAAGCGCGAGA
ACAGCATGGAGCCTGTCAACACTATTCAAATAAAACGTACCAAAGATGAT
CTGACAGGCGAAGAGTTATCCATTCAAAGTGCAGATATTATAACGGCGAC
CGAAAGCGACGTTGAGCGTGAACATGAGACGGTAGAAGCGGTAGAAGTCG
ATCCTAACTCAGAGGAAGCCCAACAACTTTTGCAAACAACCCTTGATGAA
GGACAANGGAAGTCGATCCTAACTCTGAGGAAGCCCAACAACTTTTGCAA
ACAACCCTTGATGAAGGACAAATACAACTTATGCAAATGGCTGCTGTCGG
TTTGAATGGCTACAAATTCAATAGACAGCTCAATTGCTGTTGCAGGAACT
GCTGAAGACCTGAACAATCACAATGTTCCTGTAAATCAACCAGATTCTGA
TTCAGTAATTCTTAGATGCAACCAAACCTTGAAGCTCGAGACAGCTATAG
AAATCTTGAATAACACTGACCAATACAAAGTGATAAATAAAGTTCCAGAG
AACCCAAAAGGAGGAGACACATATTTGCTGATACCTGCTCAAAAAGATGA
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011782XLOC_011782Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021011-proteinTCONS_00021011-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021011-exon-sc0000376-1575043694:254835..255210TCONS_00021011-exon-sc0000376-1575043694:254835..255210Clytia hemisphaericaexon
TCONS_00021011-exon-sc0000376-1575043694:249993..252105TCONS_00021011-exon-sc0000376-1575043694:249993..252105Clytia hemisphaericaexon
TCONS_00021011-exon-sc0000376-1510915933:254835..255210TCONS_00021011-exon-sc0000376-1510915933:254835..255210Clytia hemisphaericaexon
TCONS_00021011-exon-sc0000376-1510915933:249993..252105TCONS_00021011-exon-sc0000376-1510915933:249993..252105Clytia hemisphaericaexon
TCONS_00021011-exon-sc0000376-1491911889:254835..255210TCONS_00021011-exon-sc0000376-1491911889:254835..255210Clytia hemisphaericaexon
TCONS_00021011-exon-sc0000376-1491911889:249993..252105TCONS_00021011-exon-sc0000376-1491911889:249993..252105Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:249993..255210 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
64.4201 60.2099 21.7586 15.9612 75.8365 58.2357 40.3308 45.1738 27.6804 29.7876 30.5364 28.3121 21.7738 26.6855 22.3455 27.5834 34.2374 30.3151 17.0373 12.1509 30.5257 29.9181 70.027 59.123 29.2865 30.208 7.74512 9.85976 36.217 51.3987
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005559CG-1_dom
IPR007527Znf_SWIM
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021011 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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