TCONS_00020476 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020476
Unique NameTCONS_00020476
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1372

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020476 ID=TCONS_00020476|Name=TCONS_00020476|organism=Clytia hemisphaerica|type=transcript|length=1372bp
GTTATTTTGGTTCAAAGCTTTGCTGTCAATCTGCCTGTTAAACGTAATAC
GTATAAGattcattttcttaaatttaaaagtaaattaaaagatgATAAAT
ACATTTAGAACCATCGAGAGATTTGCTGGTTTGCAAAATATCAACAAGgT
CTGCTTGTGTCAGCATTTGCAAACAAGACAGTCCAGCTCAAGTGGTGTAA
GCTTGGTGAAACCAAAGAGAGAAAAATATCCTTTACAATACAAAGTACGC
GTTATAAACCAAGATGGATCTTCATACTTTACCAGATATCACAAACCTAT
AGGAGTAATTCAACTACCGCTTGACCCAAAAACTCTAACAGAAGAACAAT
TGAAAGCACGTCATCGTAAACAACaaagtgaaaagaaaatcaagattAAA
GAATATaaggaaaatgtcaaatttGACCGTAGAGCCATGGCTAACATAAT
GAggaagaaaaaataatacatATTAAACTTGATAAATTTGAATTCTATAA
GGATGTTATTTTATTGTCTATATCTAGAGCATTGAAtggaaatattttgt
tatcTGGAGAATCCATGGCAGTTTTATTTAGCAGGTTGCTGATATCCGTC
TAATGAACCCTAATTCCTATCAAGAAGGAATTTTGTTGGAATTTTTTCAG
gcaatttattaatttatttgaacttctttcaatcaaaatttttccaaatt
gggCTAGGATATGATTTCTGAGAAAATTACCAGGACTTTTCAATGtactt
tttttgaaacatttcaaaattttaaaccctCTCCCCTTCCCCCAGGTTTA
TCTATTTAATGATTTTGAATAAGATGGATGTAATTTGTCAATTCAATgat
atactttaggcgtacaaactttcgtgagcagaaactttcgcgaggacgaa
aaatcgcgcaattcacgacatttactttcgcgaatttaacggaaaaatat
tttttgcgagcataaactttcgcgaatcaagacgtaaaattgagaatttt
cacatgaaaaatggctcagagggacaaatacttcttggattggttGAAAC
ATTTGGCTGTTgtcttattagtcttttagcaggctaaaaagtgccataaa
agttaagttttacagattttctattttgtcaagaatttttcgcgagcata
aacttttgcgaatggcccttcctagaatttttaaagacatttactttcgc
gaaaagggccaaaattcgcgaaaattgcgaaagtttctgctcgcgaaagt
ttgtacgcgtAAAGTACTGCCTCAGCTAATAATTTGTTgatacttttttt
gttttcatgacGAGGTAAAGACCCAGTTTAATTTTGGTAGGTCTGTAAAA
GGGCAATTTTACAATCTATGGT
Run BLAST on NCBI

protein sequence of TCONS_00020476-protein

>TCONS_00020476-protein ID=TCONS_00020476-protein|Name=TCONS_00020476-protein|organism=Clytia hemisphaerica|type=polypeptide|length=124bp
MINTFRTIERFAGLQNINKVCLCQHLQTRQSSSSGVSLVKPKREKYPLQY
KVRVINQDGSSYFTRYHKPIGVIQLPLDPKTLTEEQLKARHRKQQSEKKI
KIKEYKENVKFDRRAMANIMRKKK
Run BLAST on NCBI

transcript from alignment at sc0000357:154611..162854+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020476 ID=TCONS_00020476|Name=TCONS_00020476|organism=Clytia hemisphaerica|type=transcript|length=8244bp|location=Sequence derived from alignment at sc0000357:154611..162854+ (Clytia hemisphaerica)
GTTATTTTGGTTCAAAGCTTTGCTGTCAATCTGCCTGTTAAACGTAATAC GTATAAGGTATATATTACAAATTATTACTTTCATAAAGCAATGAGTAACT TGCTGGCTGTAGTACCTAGGATATAGCATGGAAACAAGTCATATATATAG GCGCTATGGTCAGACCTTGGTTGCTTACTACACAGGAaacaatgggccat tccaaaaaaaaaaaattaccccctaatggatgacatcaatttttgaaata aattttggcacggaatttcaggcaaactttaaagagaaggtatcggaatt ccatgaattttacttaattttgcattacagtattggaattccatgatttt tttaggttacagtaacggaattccacTGTTTTGATAGGTAtagtcaggca gctgaggtcacataaaaaagtgcagtagctacaaagtttgcgaacaaact ttaaacagttgttttcaatagataCGACCTTTCTGAANaaaatacaaaat tttgcaataaagtgctgacgtcagcaaaatttcaaaaaatgtcaaaatga tccttttaatggtgtgcagctttggtccaaatttcatatgaagtgatatg ctataacaagtggaaacggtgataaaaaattgaggtaagtttgaaaaatc tggacaggccttaatttgcctgaataagcaaaatgaaaatttttatgaaa aaaaagcatagacatattacataccaatcgacgcgttttttgacgtagat taagaaaaaggtcagtaactatgtttgaaaatttaaaaataaaaagttaa aagcttccgaagttttgatgacgtcatatttacactttctttaggATCGA TCTTCTCGAGTTAGGTTGAGAAATCATATATATCGACTTGAAAGTCTTat atatcgatttttgagagctttcgaatggcggtcttagatttaaattttga taagtttgaatttttgattttttttcgtctCGGGCAGGTAAAATTGGACA TATAGGAAAAGCGTTCtaactttttatagcaaaattttcagatatggtta ctgaccattttcttaatctacCTTAAAAAACCTTCGATCAGTacgtatat aatatgtctatgttggttctcaaaattttttcagttagCCTATGGGCATG CGTGACGTCATCAGGTCCTAAAATATTaccggacacgtccggtaaataat ttcaacaactcaggttgatggtttctagatatttaggttgtatattttca attaaaagtggtttgggattgttcgcaccccgtccaatttttttgtgacc tcagctgcctgtctagtattttgtaaatttgttacggaaattccggactt tcttgaaagcaatttgctatggaaattccatgtcgtccgttgggggtaac gaataaaaactggaatggcccaataattacaaggtctcaaaagaaggttg tctaatgctcattccgacattttaaattttccgggggttttgttgtttgg aattgcttaggtcaggattgctagtaacggcttgtcactagCTTGTTTCT AGATAATATTTGTGAGAATAGGTTTTGTAACCTCCTGTAAATTATCGAAT AGAaacactgtgccgggtgcatactcggcgccttgggccccgcagggttg ctagtaacggctcgaatttcagtcaggttaaaaaaggggtactgctaccc atattataataacattacccccgtcttttttgtcattctataagtatttc caaattttgtgttctgctgtccgagtgtggctcaacgcaacggatagcgc actgggtttctgatcagaaactctttcatttggtgggttcgaaccccggt cgggtcgatatttcaaggtAAGCTAAAACACTTTAGAATAGTCAGAAAAC ATAATAAATAAGCTAGAAAAGTATTTAATTAGAAATTACATTCCAAAGCA ACATCCTTCATATTCACTTACAATGTCTGAAATtattgtccttccgtgac acttTCACCTTGTCGTTCCGTGACGgattaaaaatatcttgttattttta aaaatcttggacttcaatgggtctaatccattgcaggagagtgtcctacg aggtttagaaccattgggaaccagctcaaccctgtatggagctcagaata agcttaactaaggctaaagtacagcgttgtaagcttacagcgtaagccaa ggcggctctggaggcctaaaaaccggttttctggaaaaactactgttccc agccggttctaaaccctcaaaatcgcttcagcaccatgggaatatgctaa ttagagcctttggaagtagctcactcgcttgcaaggtcgcgtttttatgt tttttgcttaaaaaatataatctttccTGTAAAATTTCCTACCATTATgg ttgaacaataaaaatacagttCCAAGGTTTTGAAATGAACTGAATAGTAA AAATGGCTATGATTCATGATATGATGTGTCACTCCACTAGTTTCAGTCAA CATTTCTTACGCTActgctgattttgaaaaataggaatTTTTTCCTTCCT TGACGGTGTCCTTTCGTGACACTGACCTTTCTCAGTTGCAAAGGCCTGTA GccattgaaattaatttttttgactcagttcttttttcaataacaaGCAG ATAGACATAAGTTTCTTCTGGtggtattttggttttaaaattatctttaa attcacaggaatctgaatcagcatacttttgtcttttttaatgtcTTTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNACTATGAAGGCTTTAATTCAGGACTAATACTATTTTCATTAa gtttaccatttttcaaaaatagaccaaaaaaggctctgatttccttccgt gacagaaaggggacttttcaatttggcccaCTAGAGGGTATAGTACCAAA TTTCAGACACACTGAAGGAGACGGCACTGTAAAAGGCGGTGTCTCGTCTT CAACTACAAGCCGTCATGGTCGAAAATGCCAACTAAGAACAATCGAATGA AGTAGCTTTCGCAAATTTATTTGTGAGAGCTTAGCTGTACAAGGTCCAAA ACTCTTCAACAATATTCCCTCTGACATACGAAATATCACTGGCTGTTCAA AAGATTCATCTGTGCTCTATACCCGACGCATCTCACACTACGTCGCGACA AACAAGAGATTGGCTGAATCAAATGCtcttttcgatcaaattatgtTCAA ATTTACGTGTTGGGCTCAACGAGCTGGACAGATgaatatcatcaaatcaa actgaaatataatataaatataaatataatataaGCATTACACGAAGTTA CAGTAGGTATGTTGGCAATGAAAATCTtaaaacgccggattgaaagtaaa atctatcgctatttaaaaaaatgtatatagtcctccaaaacaaaggaacc gctagatgcAATCCGTTGTAATGATAACAGCATGTTCTTTGCgggttttg gatgggaaataaatagcttcaatttctcttgcctgaggaAGGTTAAAGTt ttgcctctagcccttcgggcttgaaactcacaATGGTTATACCATAGTAt tgcatagctgtcaactctccgaAATTCCCCCTATTTCTTGGATTATCAGG GAAGATTTTTCCAACTTGGAGCTCTCCTGCATTTTTGTGAGGCGAAGCTG ACAGCTATGGTATTGTTATGGTATCAATCAGCCATAGAGTGCAGAGGGGT TGAAGCCCCCCCCTGAAGGTTCAGCCCCCCCCAGAGATTTAGCCCCCACC AAAATACGAAATAGACAGCCCCCCTaccaaaatacacaaaaaacaaaaat gttagaatggaaaaaatttcaaacaatgcaAGGTCTTCATTTTGCATGTC CACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTAGCCCCCCCCTGatcttagggaaa aagagcccCCAACCAGAACTTTAGGCTCTAGCCCCCCCCTAAGAGCCAGG GGGGTTGCATTCTATGTCAGctcaaatattaagaattttccACAAAATGA TGATGACGAACCAGAACCTTGCTCCAAGATGGAATTGAATGAAAggagct gaaaaattatttgaatCAAATTGACTGGAATGACAAACTAAGCAGTGATG ATCAACAAGATATCCTAGAAATAATATCAACCAAATCTGGCTGGATAAAT TAAAAAGCCATATTCCAGCAGAAAAAGTCTAAAGTCTTTTGCAAAAGTCT TTCAATGATTCCAAGTGTTACATTGAAGCTAAAGCGATTAActcaataaa gaaaaagaatgcAATGGCAATTGTGCAGTTTTCTTTTACATTCGCAGCAG TCTTTCTAAATATCCTGTCTTAGCGAATCTTTTATAGTCCCTCTTTTCTC AAAAGGATATCTGTAGATTATCTTTAATGAATGAGGAATGAAGCGTGAAC CATCctattttcacttaaaaaaataaacagcAAACATGAAACCATTAACA ATCTCACAGGATTTTGAATTTGGCAAATAAAAATAGACTGTATAATTATA CCCTTATTAAAATCATAAAGgctggtgagtccagtcaaaacacagatttg atctgtagcgtcacgcttcacctttaTTGTAAGTTTTTCTCCCCAAACGA CAcgttgagactcacggctcGAAAGCCTATTCGTATTCGCCTAACAAAAA GGGGAAAATTTGACAATAAAGCATGggaaattttgtaatttcaaaaaaca gatgaaatattttgcatactgTGTATATGTGTATATATTATGTGTATAta caaaatattggaaaaaaggacgaaaaagatattattattatttttttttt gaaaaatgccaaaaaggaaaaaaaactttcaaaccagGGAAACAATTCCA TAATTTCCCACAGAATgcgaaaaatagaaaaaatcttatactgggaaaca tttttataatctgaaaGATGTTCattagataaaaattttgaaggaaaatc ccATAGATTTCCaatcttttggaaatttttttccggtttcTATAGGCaca tggaaaaatggaaaattttttttagttttaacgcCAAAAATTTTCCACAC TTTTAAAAACTCACAGAAGAAAGTTTCCAGTTGATGATTAAAAGTCTTTA ATGTGGGTTATTTTCAATTGTACACACCTATATTCTATGCGATAAATATT ATAGTTATCATTCTTCATAGAGCGAGCTGTCAGCTTAAAGTTGTTTTGAT GGAAATTCAAAATAGGCACTGATAGAGGCCTTCTAAGGGGTTTCACTGAC CGGTTAAGTCATTGTTATAGGAGAGCAGATGTAAATATACAGGCAagatt aaagttttttatttgtgaaagttgacaaaaacGCCCTGTCGGTTTTTCAA GAAATTAGATCTCTCTTTCATCCAAACCAACAAAATGGGAACAAAACATC AGAATCCCGGAACATAATAATAAAAACACTTCATCATCAAAACTCATCAA AGTATAAAACCAAAGACAAAAAAGTAAAAGAGTAGTAGACAAAGACCTAG CAACAGTGCTATTTATTTTTGCAACCATATTGTTTTGACAGTAGAGATCA GTATGGCCTGATTACCAATACACTTCTGATACGGCCGATGCTTTCCTATG GCAAGGAGAATTGAACGATGTACGCGTTATTTCCTCAACATTTTTCCAAT AAACAATGTTATTTACCTGGGAAAAGAATGTTCTACTGTTTCCAAAAGGA TTACTACatataaaaaaaactcaaattggGTATGTAAGTTCGTATACATC AAATTAAATCTAACGGAGTTAATTTGTCCTATCATTTCCCGGGATATCTT TCATATATTTATTATCTCCCAAATATTAGCGTCACAGGTTACGGAGGGTT TACTCATTCATGGTTAGCAAGATGGCACATTTTGGGTCAGTGCAATCTTT CTTTAAAAGGTTGGCACTTCTAAGAGGGCTGTGCTGATATATAGGAAATA CTGTTTACTTAAACATACTGCAATGATGCAGTTTGTATATAATGTTACac tctttttctgtttttcttttttcctagattcattttcttaaatttaaaag taaattaaaagatgATAAATACATTTAGAACCATCGAGAGATTTGCTGGT TTGCAAAATATCAACAAGGTAAGAGCTCTTTCTCACGGCAGCTGGTAACT AGATCTGTCATTATTTGAAATTGCTGTAGCTACagtaaaaataatattta attttatttattaatgTTATTgtggaaaatctttttcagaATTTCCCTTC TTACTACTTGCGGATACTTTCcatctggtctgcaaaatcttaaaaaaaac ctACTCAGACTTTGATAACTTTGATTTGTTATCTTCACTTGATGTGTAAC TAGAAGTATGAAAAAGTAATTCGAACCAATAAGTTGCTATTTAGTTTTCa taaatttatcattttattctttaatcagattttttgatattttattttag gTCTGCTTGTGTCAGCATTTGCAAACAAGACAGTCCAGCTCAAGTGGTGT AAGGTAAGTTCTCTGAAAGAAAACTATATTCAGAAATAAAGAATCCTCTG TACCATTGTatttattcttttgaaaatattcttgttttcaaaattgtttc ttGTTCTAAACACCCACAGTGACTCATTGACACATTGTAATCAATTACTG CTAGCGCTGAGAAGAAATAGAAACATAATTTGGTGAATTTTATGTTATTT CTTTTACCGATTATATTTTTTAGCTTGGTGAAACCAAAGAGAGAAAAATA TCCTTTACAATACAAAGTACGCGTTATAAACCAAGATGGATCTTCATACT TTACCAGATATCACAAACCTATAGGAGTAATTCAACTACCGCTTGACCCA AAAACTCTAACAGAAGAACAATTGAAAGCACGTCATCGTAAACAACaaag tgaaaagaaaatcaagattAAAGAATATaaggaaaatgtcaaatttGACC GTAGAGCCATGGCTAACATAATGAggaagaaaaaataatacatATTAAAC TTGATAAATTTGAATTCTATAAGGATGTTATTTTATTGTCTATATCTAGA GCATTGAAtggaaatattttgttatcTGGAGAATCCATGGCAGTTTTATT TAGCAGGTTGCTGATATCCGTCTAATGAACCCTAATTCCTATCAAGAAGG AATTTTGTTGGAATTTTTTCAGgcaatttattaatttatttgaacttctt tcaatcaaaatttttccaaattgggCTAGGATATGATTTCTGAGAAAATT ACCAGGACTTTTCAATGtactttttttgaaacatttcaaaattttaaacc ctCTCCCCTTCCCCCAGGTTTATCTATTTAATGATTTTGAATAAGATGGA TGTAATTTGTCAATTCAATgatatactttaggcgtacaaactttcgtgag cagaaactttcgcgaggacgaaaaatcgcgcaattcacgacatttacttt cgcgaatttaacggaaaaatattttttgcgagcataaactttcgcgaatc aagacgtaaaattgagaattttcacatgaaaaatggctcagagggacaaa tacttcttggattggttGAAACATTTGGCTGTTgtcttattagtctttta gcaggctaaaaagtgccataaaagttaagttttacagattttctattttg tcaagaatttttcgcgagcataaacttttgcgaatggcccttcctagaat ttttaaagacatttactttcgcgaaaagggccaaaattcgcgaaaattgc gaaagtttctgctcgcgaaagtttgtacgcgtAAAGTACTGCCTCAGCTA ATAATTTGTTgatactttttttgttttcatgacGAGGTAAAGACCCAGTT TAATTTTGGTAGGTCTGTAAAAGGGCAATTTTACAATCTATGGT

Coding sequence (CDS) from alignment at sc0000357:154611..162854+

>TCONS_00020476 ID=TCONS_00020476|Name=TCONS_00020476|organism=Clytia hemisphaerica|type=CDS|length=1125bp|location=Sequence derived from alignment at sc0000357:154611..162854+ (Clytia hemisphaerica)
atgATAAATACATTTAGAACCATCGAGAGATTTGCTGGTTTGCAAAATAT
CAACAAGgTCTGCTTGTGTCAGCATTTGCAAACAAGACAGTCCAGCTCAA
GTGGTGTAAGCTTGGTGAAACCAAAGAGAGAAAAATATCCTTTACAATAC
AAAGTACGCGTTATAAACCAAGATGGATCTTCATACTTTACCAGATATCA
CAAACCTATAGGAGTAATTCAACTACCGCTTGACCCAAAAACTCTAACAG
AAGAACAATTGAAAGCACGTCATCGTAAACAACaaagtgaaaagaaaatc
aagattAAAGAATATaaggaaaatgtcaaatttGACCGTAGAGCCATGGC
TAACATAATGAggaagaaaaaataaatgATAAATACATTTAGAACCATCG
AGAGATTTGCTGGTTTGCAAAATATCAACAAGgTCTGCTTGTGTCAGCAT
TTGCAAACAAGACAGTCCAGCTCAAGTGGTGTAAGCTTGGTGAAACCAAA
GAGAGAAAAATATCCTTTACAATACAAAGTACGCGTTATAAACCAAGATG
GATCTTCATACTTTACCAGATATCACAAACCTATAGGAGTAATTCAACTA
CCGCTTGACCCAAAAACTCTAACAGAAGAACAATTGAAAGCACGTCATCG
TAAACAACaaagtgaaaagaaaatcaagattAAAGAATATaaggaaaatg
tcaaatttGACCGTAGAGCCATGGCTAACATAATGAggaagaaaaaataa
atgATAAATACATTTAGAACCATCGAGAGATTTGCTGGTTTGCAAAATAT
CAACAAGgTCTGCTTGTGTCAGCATTTGCAAACAAGACAGTCCAGCTCAA
GTGGTGTAAGCTTGGTGAAACCAAAGAGAGAAAAATATCCTTTACAATAC
AAAGTACGCGTTATAAACCAAGATGGATCTTCATACTTTACCAGATATCA
CAAACCTATAGGAGTAATTCAACTACCGCTTGACCCAAAAACTCTAACAG
AAGAACAATTGAAAGCACGTCATCGTAAACAACaaagtgaaaagaaaatc
aagattAAAGAATATaaggaaaatgtcaaatttGACCGTAGAGCCATGGC
TAACATAATGAggaagaaaaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011508XLOC_011508Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020476-proteinTCONS_00020476-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020476-exon-sc0000357-1491911889:154611..154667TCONS_00020476-exon-sc0000357-1491911889:154611..154667Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1510915933:154611..154667TCONS_00020476-exon-sc0000357-1510915933:154611..154667Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1575043694:154611..154667TCONS_00020476-exon-sc0000357-1575043694:154611..154667Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1491911889:160988..161078TCONS_00020476-exon-sc0000357-1491911889:160988..161078Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1510915933:160988..161078TCONS_00020476-exon-sc0000357-1510915933:160988..161078Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1575043694:160988..161078TCONS_00020476-exon-sc0000357-1575043694:160988..161078Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1491911889:161411..161463TCONS_00020476-exon-sc0000357-1491911889:161411..161463Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1510915933:161411..161463TCONS_00020476-exon-sc0000357-1510915933:161411..161463Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1575043694:161411..161463TCONS_00020476-exon-sc0000357-1575043694:161411..161463Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1491911889:161684..162854TCONS_00020476-exon-sc0000357-1491911889:161684..162854Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1510915933:161684..162854TCONS_00020476-exon-sc0000357-1510915933:161684..162854Clytia hemisphaericaexon
TCONS_00020476-exon-sc0000357-1575043694:161684..162854TCONS_00020476-exon-sc0000357-1575043694:161684..162854Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000357supercontigsc0000357:154611..162854 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
53.1206 51.6084 21.9856 15.0608 15.0121 10.946 14.6367 16.4418 13.0605 10.8607 8.63505 7.95349 6.29272 7.29013 8.07387 8.29506 12.7612 12.7896 4.58368 4.98258 9.27199 8.19859 38.341 35.366 13.4277 14.535 10.1208 7.98483 16.2419 17.8932
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018615Ribosomal_L55_mit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005762mitochondrial large ribosomal subunit
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020476 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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