TCONS_00020476-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020476-protein
Unique NameTCONS_00020476-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020476-protein ID=TCONS_00020476-protein|Name=TCONS_00020476-protein|organism=Clytia hemisphaerica|type=polypeptide|length=124bp
MINTFRTIERFAGLQNINKVCLCQHLQTRQSSSSGVSLVKPKREKYPLQY
KVRVINQDGSSYFTRYHKPIGVIQLPLDPKTLTEEQLKARHRKQQSEKKI
KIKEYKENVKFDRRAMANIMRKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011508XLOC_011508Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020476TCONS_00020476Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018615Ribosomal_L55_mit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005762mitochondrial large ribosomal subunit
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..122
IPR018615Ribosomal protein L55, mitochondrialPFAMPF09776Mitoc_L55coord: 18..116
e-value: 4.9E-18
score: 64.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020476-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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