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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020097 ID=TCONS_00020097|Name=TCONS_00020097|organism=Clytia hemisphaerica|type=transcript|length=896bp
TTACAACCGATGTTTACAGAGTTTAAAGAATGTCAACAGCATGCATCTCT
GGTCACCATTTTGTCGGGTATCGTGCAAGCGATCACATTGCGTTGTCCAG
CAGCTCTCATCTGGAGCATCACCAAGGTTAATGCATCTAGTAATGACCCA
AACAAGAATCAAGTTTTGGGCTCACCATTAGACAAATTACCATGTCCACC
CAGTGAGTTAATCATTGGCTCCAATGAAGATGAAGCAGATAAAAACGATT
CAGAAGAGGTGCGCCTACGTCTTTTAGTTTAATTTATGATAATGTGGTAA
CAAGTGCAATTAattcaaaatgatgaaaataattctaaacaaatatttca
cGAGTACACTTTTCAAATTTAAGGAGTTATCATCTGATTACAAACTACTC
ACACGATGGACTTAACtctcattttccttttttgctcTTCGAAATTAGAT
TAACACATTCTACAAAAAAGAGCTAAAGGAAAGCAACATCGaactttctt
taaatctttaatCTCGCAAACTATTAGCGTCCCTACGAGAGTGTGACTGA
CGATCTATATTATTTTACTCCACATTGTACTCTATATTTTgcactctttt
tcttttaatgTTTTCACTTTGGCTGTTATTCTTGCCAATGCAATGGTGTG
GTTACATACTACAATGACATGTAGATTTATAATCAATTTGCACTGTGTAA
TTTCAGATTATGAACGCACTCAAAGAGAAAGAGATGGAAATCCGCCAAAG
AAGTATTGCGGTGGAAAATAGATGGCTTTGTCCTGAAAATCAAAGTACCA
AGAAAGGTACAAAACGAGAAGGAAAATTCCCTCTCTttgtttctcaaaaa
aaaagcaTCTGCCAATCGGTAGTGTGAAAAATCCGTTCACAGACTT Run BLAST on NCBI transcript from alignment at sc0000349:45757..46652+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020097 ID=TCONS_00020097|Name=TCONS_00020097|organism=Clytia hemisphaerica|type=transcript|length=896bp|location=Sequence derived from alignment at sc0000349:45757..46652+ (Clytia hemisphaerica)
TTACAACCGATGTTTACAGAGTTTAAAGAATGTCAACAGCATGCATCTCT
GGTCACCATTTTGTCGGGTATCGTGCAAGCGATCACATTGCGTTGTCCAG
CAGCTCTCATCTGGAGCATCACCAAGGTTAATGCATCTAGTAATGACCCA
AACAAGAATCAAGTTTTGGGCTCACCATTAGACAAATTACCATGTCCACC
CAGTGAGTTAATCATTGGCTCCAATGAAGATGAAGCAGATAAAAACGATT
CAGAAGAGGTGCGCCTACGTCTTTTAGTTTAATTTATGATAATGTGGTAA
CAAGTGCAATTAattcaaaatgatgaaaataattctaaacaaatatttca
cGAGTACACTTTTCAAATTTAAGGAGTTATCATCTGATTACAAACTACTC
ACACGATGGACTTAACtctcattttccttttttgctcTTCGAAATTAGAT
TAACACATTCTACAAAAAAGAGCTAAAGGAAAGCAACATCGaactttctt
taaatctttaatCTCGCAAACTATTAGCGTCCCTACGAGAGTGTGACTGA
CGATCTATATTATTTTACTCCACATTGTACTCTATATTTTgcactctttt
tcttttaatgTTTTCACTTTGGCTGTTATTCTTGCCAATGCAATGGTGTG
GTTACATACTACAATGACATGTAGATTTATAATCAATTTGCACTGTGTAA
TTTCAGATTATGAACGCACTCAAAGAGAAAGAGATGGAAATCCGCCAAAG
AAGTATTGCGGTGGAAAATAGATGGCTTTGTCCTGAAAATCAAAGTACCA
AGAAAGGTACAAAACGAGAAGGAAAATTCCCTCTCTttgtttctcaaaaa
aaaagcaTCTGCCAATCGGTAGTGTGAAAAATCCGTTCACAGACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020097-exon-sc0000349-1491911889:45757..46652 | TCONS_00020097-exon-sc0000349-1491911889:45757..46652 | Clytia hemisphaerica | exon |
| TCONS_00020097-exon-sc0000349-1510915933:45757..46652 | TCONS_00020097-exon-sc0000349-1510915933:45757..46652 | Clytia hemisphaerica | exon |
| TCONS_00020097-exon-sc0000349-1575043694:45757..46652 | TCONS_00020097-exon-sc0000349-1575043694:45757..46652 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000349 | supercontig | sc0000349:45757..46652 + |
Blast
The following BLAST results are available for this feature:
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