TCONS_00020079 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020079
Unique NameTCONS_00020079
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3496

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020079 ID=TCONS_00020079|Name=TCONS_00020079|organism=Clytia hemisphaerica|type=transcript|length=3496bp
CtgataagaaaaatatcaataaattttaaaacctTTAGATacatacaaaa
gaaaaaaacaatgtcTATTGGTAGAGGAAGGGGATTTCTTCTATCAAAGA
TTTCCAACACTGCTCCTGCTCCTATTGGTCAAAATTTAATGACCCCAAGT
CAATTTGTTAAAGCTGATCAGACAAACATTACAACAGAAGTGCAAGAGCC
AAAGAAAGTTGAAGATGTGCAAATGAAAAAGAACAACCAACAGAAAGAAA
ATCCAAAGGTTGACGTTTCAAGTCAAAAATTGAAGGATGTCCAAGACAAG
ATAAAGAACATGACAATGTCACAAGAAGATATCGATTGGCAGGTCTACAA
ATTTGCAAGGAAAATCAAACAGACTTTAAAGAATGTCACTGAAGAGAATC
TTGGCGATGTTTATGaatcaatcaaaacaatgatCAATGATCGTCCTTTG
TCATCACGATTCACTGGTGTCTCCGAGACAAAAGATATTCTTGAAGTTAT
CATTCAAAACAGCATTGCAGAGGAAACGTTCATCCAATATTCACCTTGCT
TTGTCAAAATGATTCATGAGTGTTCAGAAGTTGAATTCATCAAGTATTTT
GCTGATATCATGCATGAAAAACGAAAAGAAGTTATCAGAGTTGTTGCGTC
TCCTGAAATTTTACTTTCACAAAGTGCGAAGAACTTTTGTACATTTCTTG
GGAAGCTCTTTATACTGCCTCGCCAGAAGAGTCGAAAGTTTTTTGACACT
GTGCGAGAAATGGTGGAAGGCTTCATTGAGACGTGGACACTCAATGATTT
GGTTAATGTAAGTTGTCAAAATGANCGGCTTAATTGAGACGTGGACACTC
AATGATTTGGTTAATGGTTCGAGTATAACTGGTCATGTATTGGCAGAAAA
GAAGGTGGAGGCAGAAGCAGCACACCAATTGATCAAAACTATATCTACTG
GAATGCTGGATTGTGACTATTTGTTAACCGAAAAGATGGAGTCCTTTCTG
TGGTTTATCAAAGAAAGTGTCTTATCTGATCAAATTGCACGAGAATTGAA
AGAGTTGTTCTTGGACGCGTACATAGACATTCAGTGCACCATCAATACAC
AACCCCCCATCAATGAACAGCGTTCTGATGAAGAAAGTGAGGTCGAAATT
GAGGAAGAAATATTGATTTTGGACCAAGAAGAAGAGAATGTCAAAGAAGT
GGAAttgaatgaagaaaaagaagagccAACCGAACGTTCGGATTACCGAA
CGATCGCATATCTGTTGAACATTTATGACTGGAATGACCTCTTGCAAGAT
TTCACCGATCATAATCTAACGgataGTCGTATTGGTGAATTAGTGGAACA
GAAGCATCTCTTGTCCTCCTTAAAGGAAGCTGGTATATCAACTTTACTTC
AACGGAATATAGAAAAAGCTATCGATAAAAAAGGATGGAGTGAGTGGAAA
AAAGAGTCCTTGCATCCATACGAACTTCAATCACCCACAACGCCCACAGG
CCGCCCTCGAAGCTCTGTCTCTAACAGAATGGCAATGTCTTTCCCTAAAT
TCGGAAACTCAGAAGAAAAGAAAAGCGAACCTTCTACACCAGTAAGTCCT
CGTGTTTATTCTACAGACCAGATTGATAACAATTCTCTGGAAATTGCAGA
CCCGACATCCTTTGATTTTACGAAATTCGCAAACAATATGACACAAAGTG
AAACTATATTCTCGAAAAGTTACGAGACTTCGTATACGAATGGGGTTCAA
GAAGACGATTCAAGCGAGGAAACGAACTCTGATGTCGAGATTGAAATCGA
TGATACTTCTTCGCAAGAGAATCTCGATACTTCTTCGCAAGACAATGAAA
ACAACCTGGATGCTGAAATCGCTGGCTATACAAATACTAATGCCGAACAA
ACCCAACCAGAAGGGTCTCAAGTTCCTTTGATAGACCACGAACTGCCTAA
AATCTCTGTCGGCCGTGGGCGTGGTATGGTCAAATTTCTTGCTTCAAAAC
CTCGAGTAGGTGGCGCAAATTACAATTATGCGAAAAATGATAAGCCAGTA
GCGAAAGTACACCCGAGTGGTAGAGATGTGCAACAAAATGGTCGCCATGG
AAACTCTCCGCCATCATGGAGAAACAATCAACAAGAGAACAACCTAAGTA
GGAATTCTCCACAAACCTGGAGGAATAATAACCAACAAAGAAATGGTAGA
GAGTCAGATAACACACAAAATCGAGTTCATAGACAAAAGAATGGTTCACc
ttatcaaaagaaagaaaaaacgaaagcattcaacaacaaaaattctAAGA
AAATGAACTTCCAATCGAACTCCAATTCTAATCAAGGACAATCTTCAGGT
CGTTTCCAGACTGTCTATCGGCCTAAAGACTCACAGCAAAAACAAGTTGC
ACAGAAACCTGTGGCGGAGTTCGGTTCCAGACCTCCCAACATGTGCTTCA
AATGTAGCTCGCTAGACCACATGACTGAAGAATGCTctgtcaataatttt
tttttctgaaaacattTCTACACACAGgataaactgaaaataaaatttgt
gcctttataatattttaagatttttttttgggCAAGTGAATATTAACTTT
TAAGCTTTATAACTTTATGCGAGTCAAGCTGATATAAAAAGGTTTGTACT
TTGTTTCTTGTgttcaaattgttttgaaatttcttttatcCATTATATCT
GCAGTATTCTTTCACTACTGCAAAGATCCAACGAGGAAGTGTGAATATCA
TAAGACACGCCCTTGAATTGTAATGAATACCATCATCCAGTACTGAGAGA
ACTGAAAGAGGCACGGTTCTGggcttttgaaaatttaaccATTTTCCAGA
GGGTTTCCGCatattttcaagacttttttgcGCAAAAAGGTTCGTCTACC
CCCTGTACATATATAAAATGGAATATCCCAGTAATGAGATagtagcaagt
ttatgtattcgagataaatcgaggggaacggtataaagcaaagttgacat
gtctccaaaatcaccgtccactttgctcgacgacggtaaaaacaccaaaa
taccgtcgtctgtttaggtgagcaaaggcgatatagagccgtgcatcaac
tatcgactttgttttgtaccatttcacttaccgtcgccctcgatatcctc
ctatacataaactcggtagtgTTTATATTTAGCGTGAGAATATTTAAGAT
GCGTTTACCATGTTGAATTTTAAGATGTAACTAACATTTTTAAACTGTAC
ATAGCATAACAACATTCAATACTTTATTTTGGTCTTGTTAAGATTTTTAT
TTACACCATGTAACCTAATCACGTAACGAAAAAAGAGAGGTATGTCATAA
GGTTATATAACTTCTTTTACTTTTTGGATTATCTTATTCGGCTCTAGGTC
ATCTTACTGTTACATAAGTTACacgaaatgtttttaaaattctttcGAAA
GCGAAacttatcaatcaatcaaaagcctttctgaaatttaatctcg
Run BLAST on NCBI

transcript from alignment at sc0000348:299091..312924-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020079 ID=TCONS_00020079|Name=TCONS_00020079|organism=Clytia hemisphaerica|type=transcript|length=13834bp|location=Sequence derived from alignment at sc0000348:299091..312924- (Clytia hemisphaerica)
CTGATAAGAAAAATATCAATAAATTTTAAAACCTTTAGATACATACAAAA
GAAAAAAACAATGTCTATTGGTAGAGGAAGGGGATTTCTTCTATCAAAGA
TTTCCAACACTGCTCCTGCTCCTATTGGTCAAAATTTAATGACCCCAAGT
CAATTTGTTAAAGCTGATCAGACAAACATTACAACAGAAGTGCAAGGTAT
TATTCGTTGTTTTTTTCGGAATGTGCTTTGCTTTTTAAAAATGTTGGATT
AAAATTTTGAAAAAAATCAGCATGTTTGACATATAACGCCAAACCAGGGG
AACGAACCTTTTCTGTGTGAACCACACCTAAAATAGAAGTTCTTGGGAAG
GGTCGGGTTTCCATTTTGGTCAACCAGCAACCTTTCCTTCAAGCAAGACA
CTTTACTAGCATTGACTAGTTTTAGATTGATGTAAAATCTTGGATTGTCT
TGGGTGGGGCTGATTCCCCTCTTAACTTTTACAGAGCCAAAGAAAGTTGA
AGATGTGCAAATGAAAAAGAACAACCAACAGAAAGAAAATCCAAAGGTAA
CACAACTCTTATGTAATATAGCATTTACCTCGAAAGATCAAAATTTGTTT
CAAGATATGATCTTGCATTCTATTGCTTTTGTAAATAAAAATTCTGTAAA
GTCAAAAATACAAACAATTTAAATCTGTCTTTTAAAAGATTTTAAACTAA
GGGGCTAAGTTGTAAAAATTGAACACTGGCTGTTCTTAACCCAATGTTTT
TGTAACCATAATAGGAAGGAGCTATTAATTTAATGATTACTTTAAGGTTG
ACGTTTCAAGTCAAAAATTGAAGGATGTCCAAGACAAGATAAAGAACATG
ACAATGTCACAAGAAGATATCGATTGGCAGGTCTACAAATTTGCAAGGAA
AATCAAACAGGTATTGTCTTATTAGTTCTTCAAAGCCAGTTGTTCATTGT
GGAACTTATTATGGCAAAGATTACCTTATATATAAGACGTGGAAAATTCA
CCAACACCTATAAGCCATGTTCTATCTGAGTAATGCAGAAAAACAACTCA
CTAAACATTGTTCTTTTTTCATCCAAGACTTTAAAGAATGTCACTGAAGA
GAATCTTGGCGATGTTTATGAATCAATCAAAACAATGATCAATGGTAGGT
AATGAGGATTTTCAAGACGAAAGCTTTTTGAACTGATAATGGACCAATAG
TTTTACAAAGTTTGTCTTGTGGCTCAGCACCTGCATCAATAGACATCCTT
AGATTATAAAGCGAACCTGTTGTTATCCTCTTACCCTATCACATCTTTTC
CTGAGAGAATCTGCAGGTGAGGGTTAGCTTTTAGAATCCATAACCAGCCG
ATAATTTTAAAAACCATAAAACAAAAGAAAGTTCGAAAAGATTCATTCTG
ACATCAAAAATCTTGAAGTAATAGATGAAGTGATCTCAAGTAAAATATGC
TATATTTCGTATTCTATCTAATACATCATTCACCAGGCAAAATGTAAGTA
CAAAGAATAAAAGCTACTATTTATAAAAGTCATGGTAAAAAATCGTAAAA
AATGTTATCAATAAAAAGGCAATTAAAATGTAAAATTAGCTAAGTATAAT
TGATCCCAAGTGACTAATGATGAAAAGAAACTATTCTCGAGAAAAACTAA
ACAAAGAAATCAGGGCTATGAAAACAAATATAACTCTCTTGAGGCTTTCA
GGCCACTATTCAAAATTGGTGTATGTCTTTTAATATATAAAGTCTCTTTG
TTGAGCAAAATACTTTAATCGTAGAAATTTTAGCGAGACTAATTTTAGCG
TTTTAGCGAGTTTTCCCTATTTTCGCTAAAATAAATCTCGCTAAAACACA
ACCAATCGACAGATCGCTAAAATTTATCCGCGCTAGATTTCTGGTTATAT
TGCCTTGATACATTTTTATCAATAGGAAGGGTTTCAGTGCATAGAAATGC
TAGAAAACGAACTCAGTCAATAATGTAACGCGAGTGTTCGCTAAAATTTA
TCCACGCGAAATTTTTTGAAATCGTGATTCGCTAAAATAAATCCAAAAAA
AATCTAGATTTTCTTGACTCGCTAATATACGCTAAAATTAGTCTCGCTAA
AATTTCTACGATTAAAGTACTCCAATTGTTTGCGGAGTCGATAATTTTTG
TATTGTCTTTGACCAAATTGATGTAATACAATCTTTTATCACCACGAGTA
ACGTTGTCAATATCAAATAGCAACATCGTTCTTGATAATTTTAAAAATTG
GGTGCATTCTCTTAGGTGATCGAAAATGGCACTATCCTTTCTTGTTGCAT
GTTCAACACAGCGTTCCTGTAAATTCCTTTCAGTTTTTCCAATATACGCG
GCGGAGCAACCAGGACAACAAAAGCGATATACCACATTAGCTTTGTAATC
ATCAGGGGTTTTGTCTTTGTTGTTGGACCTACCCCGGTGGGGTGGAGGTC
CTATAAATTAACCCCTGTTCGTTAGTTAGTTAGTTAGTTAGTTCGTTCGT
TAGTTACCAACTTTTCTCGAGATTGGCTCATTCAATTTTTCTGATTTTTT
GCACAAAGGTGCATTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
ATGTAAAATGGCAATGCCCAAAATTATACATTACTTCCATTAAATTCTAA
TTATTCGTTTTATAAATAGGTAGGTCCATTAAAGTATTACTTGTTTGTAA
AGAAATTAACTTTGGTCGTAGAAAATGACGTTTTAAAGCGTAATCTTTTG
TCAGGGCGAATGCATCTTTTCAATTTATTTTCGAGGGAATGTGTCATCTG
TTTACTTTTATCACCGAAGTATGGTAATTTTAACCAAATAACTGTCTCAT
TTTCATTGGCTTCGTTCGTTTCTAATGGTGGGCAGTTAACTTTGTCAAGC
GTTGTCTTAATGATTGAGTTGCTAATTTTGCATGGGAATGAATTCCAAAA
AGCGAATTTGTGAATTTTGGACATGGTTAGCTTTTATTCTATACACTTTC
TATATCTTTTAGATCGTCCTTTGTCATCACGATTCACTGGTGTCTCCGAG
ACAAAAGATATTCTTGAAGTTATCATTCAAAACAGCATTGCAGAGGAAAC
GTTCATCCAATATTCACCTTGCTTTGTCAAAATGATTCATGGTATTTTTT
AAAACCAATAAATTTCAGTTTTTCTATTGTGATCTTACGGTCTTACTCAT
TGAGTTTAAAGCCTAAAAGACCAGGGGAATTTCCTTAACGTGTTATCCAC
ATGACTTTTAGGCATCCTCTAGATTGAAAGTAAAGCCTATTTAAGATTTC
AAAAAATGTGCCTTATGAAGTCCCGTCGTCCTAAATACCGCACAGATTTT
AAGGAAGTTTGAGAAAGGTTTCCCTCTCTACCCTATCGGGCTTTATAATG
CTCCCAAAATTTGTCACCTTAGCTCTAAACAATTTTTCCTCTCCTCTATA
CTTTGATATTTTGTTCCAAAATTATTTTGCCCTTAAACAAGGGGTGGGGT
ATTATATAGACTAGATATACACCAATTAATTAATTGAGAAGGGTTAGGTT
GAATAACAATGCCCACGGTGGAACGTCTTCAGAAATGGTTGATAGACAGG
AGGGAGAGTCCAAATTTCGTTTACAAAACATTGTTAACATTTTGATACGA
ATTATTTTAGAGTGTTCAGAAGTTGAATTCATCAAGTATTTTGCTGATAT
CATGCATGAAAAACGAAAAGAAGTTATCAGAGTGAGTCAAAAGCTAATCT
GTTTCTTTATTACATCTATCAACTCTACAACTGGATTAAATGCAAGTTCG
CCAGGTTGGAGTGACACNGTTCAACTCTACAACTGGATTCAATGCAAGTT
CGCCATGTTGGAGCGACACCAAGTTGCTACATTTTTAGTGGAAACAAAAT
CAATTAATATCAAGAAAATAGCCTTCAAAGTAATGTCTAGCATCATTAAC
TGTCCAAGATAATTAGATTAATAGATAATTGGATGAATGATTATGATAAT
GTTTTATTTTAGGTTGTTGCGTCTCCTGAAATTTTACTTTCACAAAGTGC
GAAGAACTTTTGTACATTTCTTGGGAAGCTCTTTATACTGCCTCGCCAGA
AGAGTCGAAAGTTTTTTGACACTGTGCGAGAAATGGTGGAAGGCTTCATT
GAGACGTGGACACTCAATGATTTGGTTAATGTAAGTTGTCAAAATGANCG
GCTTAATTGAGACGTGGACACTCAATGATTTGGTTAATGTAAGTTGTCCA
TATAATAAGATTTTACACCCTTCCCCCTGATGTTGCAGAGGTCATTGTTG
GGAGGCCAGTGCCAGCCTTCTTTGATTTCTTTTTTAATTTCAGAGACTTT
TCATTGATTTCTGTCTATTTTTGAGAGACCCCTTGCCCTTGGGTTTTTTA
TTTTACATAAAAATATTTTATTTTAAATGGTTTATTCTGCATAATATATT
AACTTGATTTTCTCCAACTTCTTTTCATTAGGGTTCGAGTATAACTGGTC
ATGTATTGGCAGAAAAGAAGGTGGAGGCAGAAGCAGCACACCAATTGATC
AAAACTATATCTACTGGAATGCTGGATTGTGACTAGTAGGTTTCCACAGG
ATACTTCCAATAATAGTTGAACTTCCTGTGTATTTCGGTTCACGATCTTC
AAGGCGTACAGTTAACTCTCGCTAATTCGGAATTGGGAATCTTATTTGGT
TGAATTACAGAGAGATTCGAATTATAAAAAGTATTTTTAGAGGTTTTCAT
TAAAAAAGGGGACTAGAAACAAATTCGAGTTATAGAAAGATTCAAAATGA
TAGAAATTCGAATACTGTAAGTGAGAGGTTACTGTATTAATAATGAATTT
CTTTAAACCTCACTGAACATTCTCTTTTTTTACGATTTAACGAGAAAAAA
AAAGTTACAAACACTCGTCCTAGTCCTAAGGTTGTTATGAAAGTAATGTG
TTTTTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCTGT
GTTCGTCCGTTCGTCCGTCCGTCCGTTCGTCTGTTACCAACTTTTCTCAG
GATTGAATCATAAGAATCTTTTGATTTTTGGTACAAAGGTACAAAATGGT
GGTGGCTAAAATGTGACGGAGCCCGATTTTGGGAAAAAAAATTTTGGGGG
TAAAATTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGA
AAAATTGGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACC
ATCAGGCATTATAGGTAAAAAAATTTGTTGGCTCAGAAAACGTATGTTTA
TCGATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATT
ACTCAATTTTTTTATGAGATAGATGCTTTTTTTGCTCATGAGGGCTTACT
TTTGAAGAATATGTATGTTTAAACATGAAATTTTGGTTGCTTGGCGTGTT
TTTATAGAGTAGAGAAGTTGGCCAAATTCGATATTTTTTTACAAGCACAT
TTATCAATTACTTAGGTATTAGCTTTTCTCAAGATTGGCTCTTTCATTCT
TTATAATTTTTTGCACAAAGATGCATAACTATGAACCCTCGAATGTGACG
GAGCCCAATTTTCGAAAAACAATGTTTTTGGGCAAATTTGGGCCAAAAAA
CGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAATATTGGATATTTGTTT
TTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGA
TAAAAAAAAGTGGCTAGAAAACAATTTTCGTGACACACATCTTAGAACTA
ACTTTTTTTGGTGGAAACTCACGAATTAGTATATGTAGATTCCAAAATCA
AAAAGTTTCCACGATATTATCGTGCAAGAAACGAGTAATTGGCGATTTTT
TGCGTTTCCAAGCAAAATTGCAAGGCCTGGAAATGATTTTTGGGGGGTCT
TCAAATTAAAAAAAAAAACCTATATCACATGATAGAGCTCTTCAAACTGA
GCAAAAAATGTATTACACCAAAGTCCCAACTTCTCTAGATCAAAAGTTAT
GGGCCTAATTGTGGCCAAAAAGGTGTTTAATTTTGCATAAATTAATGCAG
ATTGTGGGGAAATTCCCTGTTTTCCATCCGTTTTTGACCACAAATAGGCC
CATAACTTTTGATCTAGAGAAGTTGGGACTTTGGTGTAATACATTTTTTT
GCTCAGTTTGAAGAGCTCTATCATGTGATATATNGAAATTCCCTGTTTTC
CATCAGTTTTTGACCACAAATTTCCAGGCCTTGCAATTTTGCTTGGAAAC
GCAAAAAATCGCCAATTACTCGTTACTTGCACGATAATATCGTGGAAACT
TTTTGATTTTGGAATCTACATATGCTAATTCGCGAGTTTCCACCAAAAAA
AGTTAGTTCTAAGATGTGTGTCATGAAATGAAACATTTATCGACCTCAGC
AGCGGGACTATTTGTGAAATATTGGATATTTGTTTTTTTTCAGATTATTT
TGCATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTTAAAAAATA
ATTTTTCAACTCAAAAAAACGCATCTTTATCTATAAGAATCACTATTAAT
AAGCATACATCAATGTTCTTAGCCAAATCACTAAATTTTTTGATGAGATA
GATGTTTTTTTGCTCACGAAGTCTTGAATATGAAAGAATATTTCAAGAGT
ATGAAATTTTGGTTTCTAAACGTTTTTTTATAAGAAATTTTAAAATTTTT
AATAGATCGTCACGTATTTGTGTTCTGAATGATTGTTTAACGGTCATGCT
CACCTAGATATCAATTACTGTATATGTGTTAAATGCATAACTAGGTAGGT
CCATAAAAGTATCACTTGTTATTTAATATGTGATATGAGATGAGATAGAA
AAAAGAACAATGAATTACATACATCTTTTCAACAAATACTTTCAGATGTT
CACCTCCCATTCCANTTCACCTAGATATCAATTACTGTATATATGTGTTA
AATGCATAACCAGGTAGGTCCGTAAAAGTATCACTTGTTTATTTTCTTTT
TATCATAGTTTGTTAACCGAAAAGATGGAGTCCTTTCTGTGGTTTATCAA
AGAAAGTGTCTTATCTGATCAAATTGCACGGTAATTAATTATTTGGTGAT
TTGTGTTTGTGTCCAACAGCAGTAAAACAAGTGTTGCAATCTTTTTCTTG
CCTTCAGGAAAACGTATTCATGATATGCCTACCGCTAGAGAATGTTGTTC
CAAATGCTTTACTTATTCTATTGTTCAAATGTTGTCTTGTATTAAGTTGA
AAATTTTGAAAGTTTTTGGTCGACTCCATTTGCTACGTTATAATAGTGAA
TACCAATTAAGATATAGTGTGTATAGAAATTAAAGTGTTATCTCTCATTC
GGCACTTTCGTAGAGAATTGAAAGAGTTGTTCTTGGACGCGTACATAGAC
ATTCAGTGCACCATCAATACACAACCCCCCATCAATGAACAGCGTTCTGA
TGAAGAAAGTGAGGTCGAAATTGAGGAAGAAATATTGATTTTGGACCAAG
AAGAAGAGAATGTCAAAGGTATTTAGACAGTTTCGCCGTCGAGATGTCTT
ATCTAATCTAATATCTTTAATTGACTTTCATGGAGAAGAAGGGACGAAGA
GGTCTGAGAACCAGGGGAATTTTGCATTTTTCATCTATTTACTGTTTTGA
TATTTATAGAAGTGGAATTGAATGAAGAAAAAGAAGAGCCAACCGAACGT
TCGGATTACCGAACGATCGCATATCTGTTGAACATTTATGACTGGAATGA
CCTCTTGCAAGATTTCACCGATCATAATCTAACGGTATTCCCCATAATTC
TTCAATGTTTCTGTTCCTCCGTCTTTGTTGACNTGAAACTCTTGGCCTAT
TTCGATAGATAGGATTCTCTAGTCTAGCTATACCTTTTTTGGGTTAACTA
ACATATTTAAAGAATTTCAGCCGCTTAAAGGATCAATCAATGTTTTTAAG
AGTGTCTTGTGTACACTAACACTTATCCAATTGAAGTCTTCGTTCTTAAC
TCTTTTCGAAGGAATTATTCCAATTCTCATTCTCTCCTCCCTAGAACGTT
CATCCAATCAAAAGGAGCAACATAACATTCAAAAAGAAAGCCGAACAAAG
GCATTGGACAAACTTAAAGTATTCTTTTCCCTCTTTTCTTTCCATACTTT
ATCCAAGTTTTTCATCCATAGATTTTGAAAAATTGCAGGGGAAAACAAGT
TGGGTAAAGTGATAATTTTTGTTGTATAGCACATTATAAATCTATTCCCC
CAATATGAAATAAATATAAATCGGACCATTTTCCTCGATGAGGTATTATT
GATGAATTAATATATTTTTCGATGTATACTCTTGTTTTTTTATCGGAAGG
ATGAAATCGAAGGTGCTCTGCTCGACAATCGTACGTTGGCTGAAAGATAT
GTGGAATATCAAAATTGTCACATGGATCAGAAAAATGCGTTTATTTCTTC
ATACGAGAAAGCTCTTATCGCACACGATAGTCTGAAAGACAAAGAGAACG
TAAGAAAGCATGCTGTGTTATACACACTATTTTCACATTTTCAAACGTGA
CAGTCAGTTACCACATTCTTGTTGAATTACTTTTTTGCTGTACATAATGC
TATCTACCTTCGAACAAACCATGTGTGGTTGTGTCCCAGGGATCCATAGG
ATTGGTTGATAAAACTTTTAACGTGGTTACAGACTAAACATGAATACAAA
GTCTCTTTTATCCTTTATTATTTACCTTGTTCATACAATTCTAGCTTTGT
GATCTACACACTCGTCTACACGAGGCGTTGGAATGTTACTACCAATTACG
TGGGATACAAACCAAAGCCAGCCTATCACGTTTCGAGAAGATGACTCATC
ACAGCAACCGAAAGCTTGAGAATATCCAAACGAACTTGGAAGTTGCCACT
CGAAATATCACATTGTTCTTGAAAGCTAATAACTTAACACATCAACATAT
CCGAGATATGTCAAAAGCTATGGGCAAACTTTCGGTTTGATTGATTTGAC
GTTCCTCCTTTGGACTTTAAAGCAGTGTTTTTAAATGGCTTGATTGTTTT
TTACTTAATATGTGATATGAGATGAGATAGAAAAAAGAACAATGAATTAC
ATACATCTTTTCAACAAATACTTTCAGATGTTCACCTCCCATTCCAGGTA
ATGAAATTTTTATTCTCCCAAATATACTGTATTATATTTTTGTACAAAAG
AGTATGTGGATATTTATTTTTTAATCAGGATTTGTGTACATAGAAAATGA
TCATCAATCAAAGTATACACTTAAGTTATTATTCAAAATTGACGTATTAA
CTTTGTCTTGCAGTCATTCAAATTTATGAAAATCTAACTCGTTAAATCGT
ATAGCACCTACATCTCTGGATTTAAGGATGAAAATCTTTTCATCACACGG
AATGAAAAACCTCACAACCTCATGCTTTTTATAAGAACCAGTAAATTTTG
GTTTTGATTCAAAGGTCGAAATTTTCAGGTTTGATTGTTCTTAAGGTGCA
CTCGATTTCTGAACGACCGTATGTACCGCCAAAACAATGGCTTTCACAAT
CGGACCGTACTTTTAAAGATACGAGCGATTTTGTTATTTATGTCCAAAAG
GACGAGGAAAATTCGAGACAAAAAAATCACGAGTGCGATTTGCGAATTTT
ACGACTTATCATTTAATTACGAGCTAATCGGACGATGGGTTTTTTTCCGT
TGGAAAGAAAATTACAGTTACACTGAAAGTATTATTTTTCTCTTTATGTT
TTCTTTTATTGTTGATCATAGTTTTCCTTTCTCACAAAATGAATTTCGAA
TGAAGTTAAAAAGCTCGATAATAAAACGAAAGAAAAAACATTAAACTCCT
TTTTGTAAACATTGACAAGTCATTGGCTGCGTTTAGACCAGCCTGGTACT
TGTAATTGCTTGTAGTATTCTTTTGAATTCTATTGTTCCGCGCAATTGTT
CGGTTTGTCAAATGCCTAAAATAATGCCAGCGTGTTGGCATTTCGTTGGC
ATTTGNGTCTTTGTTGACCGCTTTAATTTAAAATTAGTTTTATTCCTTGT
TATGACCTCTTTTTTCGTTTAGGTGATTTAACTATTGATGAAGGAATTTA
AGAATCGCCAACCGCATTTCATTTGAAATTTAGTGTTCATTTTTTTTCAA
AGGATAGTCGTATTGGTGAATTAGTGGAACAGAAGCATCTCTTGTCCTCC
TTAAAGGTAAGTAATTGCTTATTTTTGATTTTCTAGCTTCTTCTCGTGCG
TAAAAGCATAACCCATTCATGTTCCTAAAGTCGTTCATTAAAATATACAA
AGGTAGACGATTCCCAAGTTTAAAGAAGTTCACGTTCGTCGTCTCATATC
ATATCTGTAGGATCTGATGGTTAAAAATGAAATTTTCAAGTCGAAAAAAG
TATTTCGTTTAAATGATGTTTGAATTTCTCTTATGTGTAGGAAGCTGGTA
TATCAACTTTACTTCAACGGAATATAGAAAAAGCTATCGATAAAAAAGGT
CAGTAATTAAAGACGTTCATCGACAGATTTCGTTCTATTTTTTGTCAAAC
CCTTCTTAATAGAACTTACGCTCTCTCCACTGAGCTCAAATTAAATGTCT
TTTTGATAGTTCGGAGGCTCGATTGTAGAAGTAATGAAAAGATCGTCCCA
TGCCTCAAAAAATAGAATTTTTAAAATAGTTCAAAGAACAAGCGTGCTGA
AATTCAGCCGAATCTGACCATTTGACATACACAACAGACAAACATACTAG
ACATTCTGAGACTCCTGCTTGTTTTCGGGAATAGTATCTTAAGTCCTTAT
TATGTCGATTTCCCCCCACAGGATGGAGTGAGTGGAAAAAAGAGTCCTTG
CATCCATACGAACTTCAATCACCCACAACGCCCACAGGCCGCCCTCGAAG
CTCTGTCTCTAACAGAATGGCAATGTCTTTCCCTAAATTCGGAAACTCAG
AAGAAAAGAAAAGCGAACCTTCTACACCAGTAAGTCCTCGTGTTTATTCT
ACAGACCAGATTGATAACAATTCTCTGGAAATTGCAGACCCGACATCCTT
TGATTTTACGAAATTCGCAAACAATATGACACAAAGTGAAACTATATTCT
CGAAAAGTTACGAGACTTCGTATACGAATGGGGTTCAAGAAGACGATTCA
AGCGAGGAAACGAACTCTGATGTCGAGATTGAAATCGATGATACTTCTTC
GCAAGAGAATCTCGATACTTCTTCGCAAGACAATGAAAACAACCTGGATG
CTGAAATCGCTGGCTATACAAATACTAATGCCGAACAAACCCAACCAGAA
GGGTCTCAAGTTCCTTTGATAGACCACGAACTGCCTAAAATCTCTGTCGG
CCGTGGGCGTGGTATGGTCAAATTTCTTGCTTCAAAACCTCGAGTAGGTG
GCGCAAATTACAATTATGCGAAAAATGATAAGCCAGTAGCGAAAGTACAC
CCGAGTGGTAGAGATGTGCAACAAAATGGTCGCCATGGAAACTCTCCGCC
ATCATGGAGAAACAATCAACAAGAGAACAACCTAAGTAGGAATTCTCCAC
AAACCTGGAGGAATAATAACCAACAAAGAAATGGTAGAGAGTCAGATAAC
ACACAAAATCGAGTTCATAGACAAAAGAATGGTTCACCTTATCAAAAGAA
AGAAAAAACGAAAGCATTCAACAACAAAAATTCTAAGAAAATGAACTTCC
AATCGAACTCCAATTCTAATCAAGGACAATCTTCAGGTCGTTTCCAGACT
GTCTATCGGCCTAAAGACTCACAGCAAAAACAAGTTGCACAGAAACCTGT
GGCGGAGTTCGGTTCCAGACCTCCCAACATGTGCTTCAAATGTAGCTCGC
TAGACCACATGACTGAAGAATGCTCTGTCAATAATTTTTTTTTCTGAAAA
CATTTCTACACACAGGATAAACTGAAAATAAAATTTGTGCCTTTATAATA
TTTTAAGATTTTTTTTTGGGCAAGTGAATATTAACTTTTAAGCTTTATAA
CTTTATGCGAGTCAAGCTGATATAAAAAGGTTTGTACTTTGTTTCTTGTG
TTCAAATTGTTTTGAAATTTCTTTTATCCATTATATCTGCAGTATTCTTT
CACTACTGCAAAGATCCAACGAGGAAGTGTGAATATCATAAGACACGCCC
TTGAATTGTAATGAATACCATCATCCAGTACTGAGAGAACTGAAAGAGGC
ACGGTTCTGGGCTTTTGAAAATTTAACCATTTTCCAGAGGGTTTCCGCAT
ATTTTCAAGACTTTTTTGCGCAAAAAGGTTCGTCTACCCCCTGTACATAT
ATAAAATGGAATATCCCAGTAATGAGATAGTAGCAAGTTTATGTATTCGA
GATAAATCGAGGGGAACGGTATAAAGCAAAGTTGACATGTCTCCAAAATC
ACCGTCCACTTTGCTCGACGACGGTAAAAACACCAAAATACCGTCGTCTG
TTTAGGTGAGCAAAGGCGATATAGAGCCGTGCATCAACTATCGACTTTGT
TTTGTACCATTTCACTTACCGTCGCCCTCGATATCCTCCTATACATAAAC
TCGGTAGTGTTTATATTTAGCGTGAGAATATTTAAGATGCGTTTACCATG
TTGAATTTTAAGATGTAACTAACATTTTTAAACTGTACATAGCATAACAA
CATTCAATACTTTATTTTGGTCTTGTTAAGATTTTTATTTACACCATGTA
ACCTAATCACGTAACGAAAAAAGAGAGGTATGTCATAAGGTTATATAACT
TCTTTTACTTTTTGGATTATCTTATTCGGCTCTAGGTCATCTTACTGTTA
CATAAGTTACACGAAATGTTTTTAAAATTCTTTCGAAAGCGAAACTTATC
AATCAATCAAAAGCCTTTCTGAAATTTAATCTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011284XLOC_011284Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020079-exon-sc0000348-1575043694:312729..312924TCONS_00020079-exon-sc0000348-1575043694:312729..312924Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:312379..312440TCONS_00020079-exon-sc0000348-1575043694:312379..312440Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:312015..312128TCONS_00020079-exon-sc0000348-1575043694:312015..312128Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:311781..311847TCONS_00020079-exon-sc0000348-1575043694:311781..311847Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:308934..309062TCONS_00020079-exon-sc0000348-1575043694:308934..309062Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:308344..308414TCONS_00020079-exon-sc0000348-1575043694:308344..308414Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:307837..308062TCONS_00020079-exon-sc0000348-1575043694:307837..308062Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:307490..307593TCONS_00020079-exon-sc0000348-1575043694:307490..307593Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:304895..304966TCONS_00020079-exon-sc0000348-1575043694:304895..304966Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:304457..304611TCONS_00020079-exon-sc0000348-1575043694:304457..304611Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:304191..304315TCONS_00020079-exon-sc0000348-1575043694:304191..304315Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:301769..301822TCONS_00020079-exon-sc0000348-1575043694:301769..301822Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:301477..301534TCONS_00020079-exon-sc0000348-1575043694:301477..301534Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1575043694:299091..301153TCONS_00020079-exon-sc0000348-1575043694:299091..301153Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:312729..312924TCONS_00020079-exon-sc0000348-1510915933:312729..312924Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:312379..312440TCONS_00020079-exon-sc0000348-1510915933:312379..312440Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:312015..312128TCONS_00020079-exon-sc0000348-1510915933:312015..312128Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:311781..311847TCONS_00020079-exon-sc0000348-1510915933:311781..311847Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:308934..309062TCONS_00020079-exon-sc0000348-1510915933:308934..309062Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:308344..308414TCONS_00020079-exon-sc0000348-1510915933:308344..308414Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:307837..308062TCONS_00020079-exon-sc0000348-1510915933:307837..308062Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:307490..307593TCONS_00020079-exon-sc0000348-1510915933:307490..307593Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:304895..304966TCONS_00020079-exon-sc0000348-1510915933:304895..304966Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:304457..304611TCONS_00020079-exon-sc0000348-1510915933:304457..304611Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:304191..304315TCONS_00020079-exon-sc0000348-1510915933:304191..304315Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:301769..301822TCONS_00020079-exon-sc0000348-1510915933:301769..301822Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:301477..301534TCONS_00020079-exon-sc0000348-1510915933:301477..301534Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1510915933:299091..301153TCONS_00020079-exon-sc0000348-1510915933:299091..301153Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:312729..312924TCONS_00020079-exon-sc0000348-1491911889:312729..312924Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:312379..312440TCONS_00020079-exon-sc0000348-1491911889:312379..312440Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:312015..312128TCONS_00020079-exon-sc0000348-1491911889:312015..312128Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:311781..311847TCONS_00020079-exon-sc0000348-1491911889:311781..311847Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:308934..309062TCONS_00020079-exon-sc0000348-1491911889:308934..309062Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:308344..308414TCONS_00020079-exon-sc0000348-1491911889:308344..308414Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:307837..308062TCONS_00020079-exon-sc0000348-1491911889:307837..308062Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:307490..307593TCONS_00020079-exon-sc0000348-1491911889:307490..307593Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:304895..304966TCONS_00020079-exon-sc0000348-1491911889:304895..304966Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:304457..304611TCONS_00020079-exon-sc0000348-1491911889:304457..304611Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:304191..304315TCONS_00020079-exon-sc0000348-1491911889:304191..304315Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:301769..301822TCONS_00020079-exon-sc0000348-1491911889:301769..301822Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:301477..301534TCONS_00020079-exon-sc0000348-1491911889:301477..301534Clytia hemisphaericaexon
TCONS_00020079-exon-sc0000348-1491911889:299091..301153TCONS_00020079-exon-sc0000348-1491911889:299091..301153Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:299091..312924 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.09162	2.66124	0.617996	0	4.41634	4.0715	2.10518	2.62779	11.3299	11.6519	14.1544	8.36117	3.74185	2.82432	7.13251	2.32821	1.63895	5.03966	2.53891	1.2143	1.58316	2.31664	3.12908	3.41375	0.568058	2.61502	1.49623	0.798728	3.63485	6.17247
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020079 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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