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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020026 ID=TCONS_00020026|Name=TCONS_00020026|organism=Clytia hemisphaerica|type=transcript|length=3773bp
tttaattcaagataaaaaatttccCTTTGGTAGTCTGAATGGAATATTCA
GCCAAAacaaattcaggaaaatttttcatgaaaatgaacGTAGCGGGACA
TTTATCCGACCATATCATACGTTgtgaatttattttgaaaattactgGAA
AATCTGCATAATGGACTATTGTTGACAAGAAGGAAATCAGAGgctattgt
ttttgttttatttttgacaaaaaaggaaatttttgtcatttttcactCAG
ATATCATAAGAGTTGAAGAAGGGAAgaaggtgtaaaaaaattgaaaatag
aaGAGAAAGTACAGGAAAGGTCGTGACGTGTttggaaaaattataaaaaa
caaatcGTTGAAAGGTTCTAGTAACGTTGGAAGGAAAACATCGAGTTCAA
CACATTTCAAAAGTAATTAAACCATCATTAACAAACAGAAGCACGAATAG
CTAAAATTCAAATTGAAGACATTTCAATAATAACAATTGATTACACAATC
ATTGGAAATGCAGCGAGCGGTGAATACGGTGCAGTCCATCGGCATAAACT
ACAAAGTCATTCAAATCGAACTTCTCGACGACTCAGATCTatcaagaaat
attttcaagaaaaccAAAACGAAAGAGATcttagaaaatgttttccaaat
caTTGATATCAtcgaaaaagaatattttggattatatttcaaaaatttgc
aaaCGGACGAACGTATGTGGTTAAAGCCCAGTGGTACAGTGTGGAGCCAG
ATTGTCAAAGTTATGGAGCCACCATATCAACTGTACTTTGGTGTGAAATA
TTTCCCCTTTGATCCTCTTTCTTTACAAGAAGACGTGACACTGTATATGA
TGTACCTACAACTGAGACGTGatatcaaagatggcagatgtATTTGCTCT
GATCACGAAAGAGCTGAAATGTTGGCTCACATTCTACAAGCAGAAGCAGG
CGACCACGGTCCGTCATCGGCGCACAAATATCGTCATTTCTTTGTCAACC
TTCAACAAACAACTCCTGAGCTCGAAAGAGCCGTCTTGGATATTTACACA
CACATGGGAGGGATGGATCCACCCACGTGCGAAATGAAACTGATGGAGAA
AGCACTCACAGTCACTTACTACAGTCAAGAGATCTACCACGTGCGCTCTG
ATGCTCAACCGGGCCTCAAGAGGTTGACCCTCACCCTGGGTCCGATTGGG
ATCGGATTATATCAAAATTCAGTGAAGTTGGATATTTTTAATTGGATGGA
AATTTGGAATGTTGGCTACATTAATTCCATTTTCTGGTTCCGCGTCATGA
GAGAAGGGGAGAAAAGCAAAcataaatttcattttaataacAATAAAACG
TGCGAACACGTCTGGAAAGCTTTTCGagatttctttaatttctacATCCA
GGAACGAAAAGTAGATCCGAAGTTAATGTGGGGCCGCCAGCCACCCAAGG
TGCAACGTCTGACATTGTTAAGCGACGCCCACACACCAGCGATGCGACAC
GCAAATGTCGTCCCAAAAATCTCTCGTGATAATTTCTCAAGCCTTATTGT
TGATCCTGGTAACTATGGAAACCCAATAATGGCGGACCCTTATGCTAACG
GAAACAAAATTCAACTTAGCAAGCAAGATTCGGGACCCAAGTTGGTGTTC
ACCTCCGACAAGACGTTGACAGGAAGCGGGCGCGGTCTCCAACAACAGCC
AGATCAACAAGAAGCGAGAAACGGCAATCTTCAAAACATGTTTCGACCTC
ATGACGAGGCTATGTTCACGGTACCGAAACAAGGCGAACAGCCGCATCAC
GAACAGGAACATCAGGGCCCACAAACAGCGGTTCTCTAAACCTTCATCCA
ATCCAACTATTCACCATTCAATGAAAACATTTACGTCAAGGATGAAGCCA
AAAGAGGAAATCTTGGTCTGTTACCTCATGGATAATCAATAACATTGCCA
ATGAGCAGAAGGGCAGATAGTGTCTTTCGAAGCAGTTAGGTTCTCTAATG
GGCTCACAGAATAGTCAAAATAAACTTGATATAGAACAAAATAGAAttct
tgacttttaacaaaggCCTTAATGGaccaaaacattcaaattaCGTCCAG
ATTCTGTGTAAATAAAATCGAATGAAAATATCTTATAATAAAGTTATCAT
TATCTTGATGTAGTAAAGTATTATCTAtataaaattttcgaaaagttaat
aaaaatataaacaaaaatattcctCTAGTAGTCATTATTCTTCAAAAGGC
TATGGTTTGTACTACATATGGTAGCAGTCACACAATGCATCAAAAATACC
ATATTTAATCCAGACATAGATTATGATAATTTAAATTGACTCTAATAACA
AAATTgtagtttttataagaaagacaACGAGATACTCGTTGAAAAGAAGA
GAACTAGCAAGAAAATGCATTCAATTATCAAAGTAATGGAGAGCATGGGG
GCCCCCTACAGGTAATAAATTTAAGCCAATTGCACTGTGGCTGCATCTTG
GTGCTGCACAGTGATCAAAATACTTCGAAACTTATCAATGCAAATAATCA
GTTTGGAGCGAGAAACATTCTCGAAATACATGATGTTCTCTAGGTGATGT
TCaccatcaaaatattttgtcatcCGCAAAAAGAACAGCATATCATCACG
TTCAACGAGGTACGACACAGAAATTATACTTAACTGCATGGCGACGGGGA
AAGCATCAAATATAGTTTTGTCTCCAGTCCCTTTTAACTGAAACCGTTGG
AAAAATGTATTTCTCTGCTCCACCGGGTCGATCTCGTTGTCACGTTCTAA
ATCAATGGCTGCCATGGGAACCATGTAAACAAACGTATGAAGCTGTTTGA
TCAGCCTCTTTTTCAGTAACCACGTGACTATTTGCGCATGCTCAACATGC
TTATCATTACATAATGGATTTCGATAGTCACCCAGGGTTAACGGAAAGGA
GAACTTTTGAAACACGTTATGAAGTGATTGTTCAGGGAATTTCTTCGTGA
ATTCCTCAGAACATTTAGAATCAATTTCAGTGGGAACACTCTCAGCAAGA
ACATAAATATTGCTTTCAGCTAAAGGATAGATAACAATACATTTACCCCA
ATAAATCAAATGAGCAACTATTTGAAAGATTTGTGGTAAGGAGATGTCAG
CATCTTGGCAAAGTGTTTGGAAGTTCTTGACAGGTCGGGATAAAGTGATT
AGTCGGTGTAGCACGGGAGAAGCATCGGGAGGAAGGATTTTGATGAGGTT
TGCAATCTCATTTTCTTCATGTTCATTGTCGTCATCGTCAGTGAGAAGGA
GAGTGTGGTAGGGTTTGATTCTGCGGATGTAAGTATTGAATTTTGATGTA
TCAATCATCGTCTCCCGAATCTCCGCTTTATGGATTTTGTGAGGAAAACA
GTAATTAAGACCAAGCCATCCGTTAACGTTGATGTTGACAATGCCGTAAT
CACACATCGATTGGAACGCAGATACGATGTCTTTGGCCAGTTGACTTTTT
GCCAGCGTTCTTTCGTGAACGTTTTGTTCAGATTCGGGGAGGTCTTCGAT
ACGATCGATTTCTAAGACCATGATCTCGTGCTGGTTGGACAGATATCGTA
CcctatgatttaaaaaaagatgatGGACTCAATTATGGCTagcatttttg
gccattttagcGTTTTTCTGAATCTAAAGTTCGGACGAGAATGACATGTT
AAGGCTTTCTACTTTTATCTAATTAAATATTTCGATTTGGCAGGGGTATA
ATGGCTTCCaagctatattctca Run BLAST on NCBI protein sequence of TCONS_00020026-protein >TCONS_00020026-protein ID=TCONS_00020026-protein|Name=TCONS_00020026-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MQRAVNTVQSIGINYKVIQIELLDDSDLSRNIFKKTKTKEILENVFQIID
IIEKEYFGLYFKNLQTDERMWLKPSGTVWSQIVKVMEPPYQLYFGVKYFP
FDPLSLQEDVTLYMMYLQLRRDIKDGRCICSDHERAEMLAHILQAEAGDH
GPSSAHKYRHFFVNLQQTTPELERAVLDIYTHMGGMDPPTCEMKLMEKAL
TVTYYSQEIYHVRSDAQPGLKRLTLTLGPIGIGLYQNSVKLDIFNWMEIW
NVGYINSIFWFRVMREGEKSKHKFHFNNNKTCEHVWKAFRDFFNFYIQER
KVDPKLMWGRQPPKVQRLTLLSDAHTPAMRHANVVPKISRDNFSSLIVDP
GNYGNPIMADPYANGNKIQLSKQDSGPKLVFTSDKTLTGSGRGLQQQPDQ
QEARNGNLQNMFRPHDEAMFTVPKQGEQPHHEQEHQGPQTAVL Run BLAST on NCBI transcript from alignment at sc0000348:78794..83325+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020026 ID=TCONS_00020026|Name=TCONS_00020026|organism=Clytia hemisphaerica|type=transcript|length=4532bp|location=Sequence derived from alignment at sc0000348:78794..83325+ (Clytia hemisphaerica)
tttaattcaagataaaaaatttccCTTTGGTAGTCTGAATGGAATATTCA
GCCAAAacaaattcaggaaaatttttcatgaaaatgaacGTAGCGGGACA
TTTATCCGACCATATCATACGTTgtgaatttattttgaaaattactgGAA
AATCTGCATAATGGACTATTGTTGACAAGAAGGAAATCAGAGgctattgt
ttttgttttatttttgacaaaaaaggaaatttttgtcatttttcactCAG
ATATCATAAGAGTTGAAGAAGGGAAgaaggtgtaaaaaaattgaaaatag
aaGAGAAAGTACAGGAAAGGTCGTGACGTGTttggaaaaattataaaaaa
caaatcGTTGAAAGGTTCTAGTAACGTTGGAAGGAAAACATCGAGTTCAA
CACATTTCAAAAGTAATTAAACCATCATTAACAAACAGAAGCACGAATAG
CTAAAATTCAAATTGAAGACATTTCAATAATAACAATTGATTACACAATC
ATTGGAAATGCAGCGAGCGGTGAATACGGTGCAGTCCATCGGCATAAACT
ACAAAGTCATTCAAATCGAACTTCTCGACGACTCAGATCTatcaagaaat
attttcaagaaaaccAAAACGAAAGAGATcttagaaaatgttttccaaat
caTTGATATCAtcgaaaaagaatattttggattatatttcaaaaatttgc
aaaCGGACGAACGTATGTGGTTAAAGCCCAGTGGTACAGTGTGGAGCCAG
ATTGTCAAAGTTATGGAGCCACCATATCAACTGTACTTTGGTGTGAAATA
TTTCCCCTTTGATCCTCTTTCTTTACAAGAAGACGTGACACTGTATATGA
TGTACCTACAACTGAGACGTGatatcaaagatggcagatgtATTTGCTCT
GATCACGAAAGAGCTGAAATGTTGGCTCACATTCTACAAGCAGAAGCAGG
TAGGGTCTTTCCCTTATAAGTTTTTCTATATAAACACAAAACTTCATAAT
TTGAGTCCATTCCCAGTATACACGATTCTTCTTAACTTTCCAATCAACGT
TTCATGTGTAGATCAAGCAAACATCCCTCTCAcggtaattaaaaaaaaat
cagggGATGTAGATTAGACAGACAACATATATTTGATGATTTTCCCATAA
TGCATTTCAGGCGACCACGGTCCGTCATCGGCGCACAAATATCGTCATTT
CTTTGTCAACCTTCAACAAACAACTCCTGAGCTCGAAAGAGCCGTCTTGG
ATGTAAGTATAATAGATCAATTCGGGGCATCCTTTTCACAGCAAGTTATA
GATTCAGAGCATCCCCTTCTCAcggacccggtaggattttttagccagtg
ggggtaaaattaacagaccaaaactcgatggggattgatattcccatgtt
tttgaTGGCtcgggatttgaattccattgttttcgagtcaCAGTGGGAAT
GGAAGAATAgccacaatattttgcagtgagctTTTGCTTATCTCATTATT
TTCGACGGAGACAAaaaatggaatataattttacgggagacgatattttg
gccaatttttccagtgggaaggattcccagttggtctgtgagaagggggt
gtgttaTAAAAAACAAGCGAATTTAACCAAAGTTCTTATTCCTGAAGAGT
TAAAAACTGGAAGCTCCGAGCCTAAGTAAAAGCAAAATATGTCAACATGT
AGCCTGAATGTCGTATACTAACCCATCTTCAATTTTTCTCTTGGTCAGAT
TTACACACACATGGGAGGGATGGATCCACCCACGTGCGAAATGAAACTGA
TGGAGAAAGCACTCACAGTCACTTACTACAGTCAAGAGATCTACCACGTG
CGCTCTGATGCTCAACCGGGCCTCAAGAGGTTGACCCTCACCCTGGGTCC
GATTGGGATCGGATTATATCAAAATTCAGTGAAGTTGGATATTTTTAATT
GGATGGAAATTTGGAATGTTGGCTACATTAATTCCATTTTCTGGTTCCGC
GTCATGAGAGAAGGGGAGAAAAGCAAAcataaatttcattttaataacAA
TAAAACGTGCGAACACGTCTGGAAAGCTTTTCGagatttctttaatttct
acATCCAGGAACGAAAAGTAGATCCGAAGTTAATGTGGGGCCGCCAGCCA
CCCAAGGTGCAACGTCTGACATTGTTAAGCGACGCCCACACACCAGCGAT
GCGACACGCAAATGTCGTCCCAAAAATCTCTCGTGATAATTTCTCAAGCC
TTATTGTTGATCCTGGTAACTATGGAAACCCAATAATGGCGGACCCTTAT
GCTAACGGAAACAAAATTCAACTTAGCAAGCAAGATTCGGGACCCAAGTT
GGTGTTCACCTCCGACAAGACGTTGACAGGAAGCGGGCGCGGTCTCCAAC
AACAGCCAGATCAACAAGAAGCGAGAAACGGCAATCTTCAAAACATGTTT
CGACCTCATGACGAGGCTATGTTCACGGTACCGAAACAAGGCGAACAGCC
GCATCACGAACATGAACATCAGGGACCACAGACAGCGGTTCTCTAAACNG
CCGCATCATGAACAGGAACATCAGGGCCCACAAACAGCGGTTCTCTAAAC
CTTCATCCAATCCAACTATTCACCATTCAATGAAAACATTTACGTCAAGG
ATGAAGCCAAAAGAGGAAATCTTGGTCTGTTACCTCATGGATAATCAATA
ACATTGCCAATGAGCAGAAGGGCAGATAGTGTCTTTCGAAGCAGTTAGGT
TCTCTAATGGGCTCACAGAATAGTCAAAATAAACTTGATATAGAACAAAA
TAGAAttcttgacttttaacaaaggCCTTAATGGaccaaaacattcaaat
taCGTCCAGATTCTGTGTAAATAAAATCGAATGAAAATATCTTATAATAA
AGTTATCATTATCTTGATGTAGTAAAGTATTATCTAtataaaattttcga
aaagttaataaaaatataaacaaaaatattcctCTAGTAGTCATTATTCT
TCAAAAGGCTATGGTTTGTACTACATATGGTAGCAGTCACACAATGCATC
AAAAATACCATATTTAATCCAGACATAGATTATGATAATTTAAATTGACT
CTAATAACAAAATTgtagtttttataagaaagacaACGAGATACTCGTTG
AAAAGAAGAGAACTAGCAAGAAAATGCATTCAATTATCAAAGTAATGGAG
AGCATGGGGGCCCCCTACAGGTAATAAATTTAAGCCAATTGCACTGTGGC
TGCATCTTGGTGCTGCACAGTGATCAAAATACTTCGAAACTTATCAATGC
AAATAATCAGTTTGGAGCGAGAAACATTCTCGAAATACATGATGTTCTCT
AGGTGATGTTCaccatcaaaatattttgtcatcCGCAAAAAGAACAGCAT
ATCATCACGTTCAACGAGGTACGACACAGAAATTATACTTAACTGCATGG
CGACGGGGAAAGCATCAAATATAGTTTTGTCTCCAGTCCCTTTTAACTGA
AACCGTTGGAAAAATGTATTTCTCTGCTCCACCGGGTCGATCTCGTTGTC
ACGTTCTAAATCAATGGCTGCCATGGGAACCATGTAAACAAACGTATGAA
GCTGTTTGATCAGCCTCTTTTTCAGTAACCACGTGACTATTTGCGCATGC
TCAACATGCTTATCATTACATAATGGATTTCGATAGTCACCCAGGGTTAA
CGGAAAGGAGAACTTTTGAAACACGTTATGAAGTGATTGTTCAGGGAATT
TCTTCGTGAATTCCTCAGAACATTTAGAATCAATTTCAGTGGGAACACTC
TCAGCAAGAACATAAATATTGCTTTCAGCTAAAGGATAGATAACAATACA
TTTACCCCAATAAATCAAATGAGCAACTATTTGAAAGATTTGTGGTAAGG
AGATGTCAGCATCTTGGCAAAGTGTTTGGAAGTTCTTGACAGGTCGGGAT
AAAGTGATTAGTCGGTGTAGCACGGGAGAAGCATCGGGAGGAAGGATTTT
GATGAGGTTTGCAATCTCATTTTCTTCATGTTCATTGTCGTCATCGTCAG
TGAGAAGGAGAGTGTGGTAGGGTTTGATTCTGCGGATGTAAGTATTGAAT
TTTGATGTATCAATCATCGTCTCCCGAATCTCCGCTTTATGGATTTTGTG
AGGAAAACAGTAATTAAGACCAAGCCATCCGTTAACGTTGATGTTGACAA
TGCCGTAATCACACATCGATTGGAACGCAGATACGATGTCTTTGGCCAGT
TGACTTTTTGCCAGCGTTCTTTCGTGAACGTTTTGTTCAGATTCGGGGAG
GTCTTCGATACGATCGATTTCTAAGACCATGATCTCGTGCTGGTTGGACA
GATATCGTACcctatgatttaaaaaaagatgatGGACTCAATTATGGCTa
gcatttttggccattttagcGTTTTTCTGAATCTAAAGTTCGGACGAGAA
TGACATGTTAAGGCTTTCTACTTTTATCTAATTAAATATTTCGATTTGGC
AGGGGTATAATGGCTTCCaagctatattctca Coding sequence (CDS) from alignment at sc0000348:78794..83325+ >TCONS_00020026 ID=TCONS_00020026|Name=TCONS_00020026|organism=Clytia hemisphaerica|type=CDS|length=5328bp|location=Sequence derived from alignment at sc0000348:78794..83325+ (Clytia hemisphaerica)
ATGCAGCGAGCGGTGAATACGGTGCAGTCCATCGGCATAAACTACAAAGT
CATTCAAATCGAACTTCTCGACGACTCAGATCTatcaagaaatattttca
agaaaaccAAAACGAAAGAGATcttagaaaatgttttccaaatcaTTGAT
ATCAtcgaaaaagaatattttggattatatttcaaaaatttgcaaaCGGA
CGAACGTATGTGGTTAAAGCCCAGTGGTACAGTGTGGAGCCAGATTGTCA
AAGTTATGGAGCCACCATATCAACTGTACTTTGGTGTGAAATATTTCCCC
TTTGATCCTCTTTCTTTACAAGAAGACGTGACACTGTATATGATGTACCT
ACAACTGAGACGTGatatcaaagatggcagatgtATTTGCTCTGATCACG
AAAGAGCTGAAATGTTGGCTCACATTCTACAAGCAGAAGCAGGCGACCAC
GGTCCGTCATCGGCGCACAAATATCGTCATTTCTTTGTCAACCTTCAACA
AACAACTCCTGAGCTCGAAAGAGCCGTCTTGGATATTTACACACACATGG
GAGGGATGGATCCACCCACGTGCGAAATGAAACTGATGGAGAAAGCACTC
ACAGTCACTTACTACAGTCAAGAGATCTACCACGTGCGCTCTGATGCTCA
ACCGGGCCTCAAGAGGTTGACCCTCACCCTGGGTCCGATTGGGATCGGAT
TATATCAAAATTCAGTGAAGTTGGATATTTTTAATTGGATGGAAATTTGG
AATGTTGGCTACATTAATTCCATTTTCTGGTTCCGCGTCATGAGAGAAGG
GGAGAAAAGCAAAcataaatttcattttaataacAATAAAACGTGCGAAC
ACGTCTGGAAAGCTTTTCGagatttctttaatttctacATCCAGGAACGA
AAAGTAGATCCGAAGTTAATGTGGGGCCGCCAGCCACCCAAGGTGCAACG
TCTGACATTGTTAAGCGACGCCCACACACCAGCGATGCGACACGCAAATG
TCGTCCCAAAAATCTCTCGTGATAATTTCTCAAGCCTTATTGTTGATCCT
GGTAACTATGGAAACCCAATAATGGCGGACCCTTATGCTAACGGAAACAA
AATTCAACTTAGCAAGCAAGATTCGGGACCCAAGTTGGTGTTCACCTCCG
ACAAGACGTTGACAGGAAGCGGGCGCGGTCTCCAACAACAGCCAGATCAA
CAAGAAGCGAGAAACGGCAATCTTCAAAACATGTTTCGACCTCATGACGA
GGCTATGTTCACGGTACCGAAACAAGGCGAACAGCCGCATCACGAACAGG
AACATCAGGGCCCACAAACAGCGGTTCTCTAAATGCAGCGAGCGGTGAAT
ACGGTGCAGTCCATCGGCATAAACTACAAAGTCATTCAAATCGAACTTCT
CGACGACTCAGATCTatcaagaaatattttcaagaaaaccAAAACGAAAG
AGATcttagaaaatgttttccaaatcaTTGATATCAtcgaaaaagaatat
tttggattatatttcaaaaatttgcaaaCGGACGAACGTATGTGGTTAAA
GCCCAGTGGTACAGTGTGGAGCCAGATTGTCAAAGTTATGGAGCCACCAT
ATCAACTGTACTTTGGTGTGAAATATTTCCCCTTTGATCCTCTTTCTTTA
CAAGAAGACGTGACACTGTATATGATGTACCTACAACTGAGACGTGatat
caaagatggcagatgtATTTGCTCTGATCACGAAAGAGCTGAAATGTTGG
CTCACATTCTACAAGCAGAAGCAGGCGACCACGGTCCGTCATCGGCGCAC
AAATATCGTCATTTCTTTGTCAACCTTCAACAAACAACTCCTGAGCTCGA
AAGAGCCGTCTTGGATATTTACACACACATGGGAGGGATGGATCCACCCA
CGTGCGAAATGAAACTGATGGAGAAAGCACTCACAGTCACTTACTACAGT
CAAGAGATCTACCACGTGCGCTCTGATGCTCAACCGGGCCTCAAGAGGTT
GACCCTCACCCTGGGTCCGATTGGGATCGGATTATATCAAAATTCAGTGA
AGTTGGATATTTTTAATTGGATGGAAATTTGGAATGTTGGCTACATTAAT
TCCATTTTCTGGTTCCGCGTCATGAGAGAAGGGGAGAAAAGCAAAcataa
atttcattttaataacAATAAAACGTGCGAACACGTCTGGAAAGCTTTTC
GagatttctttaatttctacATCCAGGAACGAAAAGTAGATCCGAAGTTA
ATGTGGGGCCGCCAGCCACCCAAGGTGCAACGTCTGACATTGTTAAGCGA
CGCCCACACACCAGCGATGCGACACGCAAATGTCGTCCCAAAAATCTCTC
GTGATAATTTCTCAAGCCTTATTGTTGATCCTGGTAACTATGGAAACCCA
ATAATGGCGGACCCTTATGCTAACGGAAACAAAATTCAACTTAGCAAGCA
AGATTCGGGACCCAAGTTGGTGTTCACCTCCGACAAGACGTTGACAGGAA
GCGGGCGCGGTCTCCAACAACAGCCAGATCAACAAGAAGCGAGAAACGGC
AATCTTCAAAACATGTTTCGACCTCATGACGAGGCTATGTTCACGGTACC
GAAACAAGGCGAACAGCCGCATCACGAACAGGAACATCAGGGCCCACAAA
CAGCGGTTCTCTAAATGCAGCGAGCGGTGAATACGGTGCAGTCCATCGGC
ATAAACTACAAAGTCATTCAAATCGAACTTCTCGACGACTCAGATCTatc
aagaaatattttcaagaaaaccAAAACGAAAGAGATcttagaaaatgttt
tccaaatcaTTGATATCAtcgaaaaagaatattttggattatatttcaaa
aatttgcaaaCGGACGAACGTATGTGGTTAAAGCCCAGTGGTACAGTGTG
GAGCCAGATTGTCAAAGTTATGGAGCCACCATATCAACTGTACTTTGGTG
TGAAATATTTCCCCTTTGATCCTCTTTCTTTACAAGAAGACGTGACACTG
TATATGATGTACCTACAACTGAGACGTGatatcaaagatggcagatgtAT
TTGCTCTGATCACGAAAGAGCTGAAATGTTGGCTCACATTCTACAAGCAG
AAGCAGGCGACCACGGTCCGTCATCGGCGCACAAATATCGTCATTTCTTT
GTCAACCTTCAACAAACAACTCCTGAGCTCGAAAGAGCCGTCTTGGATAT
TTACACACACATGGGAGGGATGGATCCACCCACGTGCGAAATGAAACTGA
TGGAGAAAGCACTCACAGTCACTTACTACAGTCAAGAGATCTACCACGTG
CGCTCTGATGCTCAACCGGGCCTCAAGAGGTTGACCCTCACCCTGGGTCC
GATTGGGATCGGATTATATCAAAATTCAGTGAAGTTGGATATTTTTAATT
GGATGGAAATTTGGAATGTTGGCTACATTAATTCCATTTTCTGGTTCCGC
GTCATGAGAGAAGGGGAGAAAAGCAAAcataaatttcattttaataacAA
TAAAACGTGCGAACACGTCTGGAAAGCTTTTCGagatttctttaatttct
acATCCAGGAACGAAAAGTAGATCCGAAGTTAATGTGGGGCCGCCAGCCA
CCCAAGGTGCAACGTCTGACATTGTTAAGCGACGCCCACACACCAGCGAT
GCGACACGCAAATGTCGTCCCAAAAATCTCTCGTGATAATTTCTCAAGCC
TTATTGTTGATCCTGGTAACTATGGAAACCCAATAATGGCGGACCCTTAT
GCTAACGGAAACAAAATTCAACTTAGCAAGCAAGATTCGGGACCCAAGTT
GGTGTTCACCTCCGACAAGACGTTGACAGGAAGCGGGCGCGGTCTCCAAC
AACAGCCAGATCAACAAGAAGCGAGAAACGGCAATCTTCAAAACATGTTT
CGACCTCATGACGAGGCTATGTTCACGGTACCGAAACAAGGCGAACAGCC
GCATCACGAACAGGAACATCAGGGCCCACAAACAGCGGTTCTCTAAATGC
AGCGAGCGGTGAATACGGTGCAGTCCATCGGCATAAACTACAAAGTCATT
CAAATCGAACTTCTCGACGACTCAGATCTatcaagaaatattttcaagaa
aaccAAAACGAAAGAGATcttagaaaatgttttccaaatcaTTGATATCA
tcgaaaaagaatattttggattatatttcaaaaatttgcaaaCGGACGAA
CGTATGTGGTTAAAGCCCAGTGGTACAGTGTGGAGCCAGATTGTCAAAGT
TATGGAGCCACCATATCAACTGTACTTTGGTGTGAAATATTTCCCCTTTG
ATCCTCTTTCTTTACAAGAAGACGTGACACTGTATATGATGTACCTACAA
CTGAGACGTGatatcaaagatggcagatgtATTTGCTCTGATCACGAAAG
AGCTGAAATGTTGGCTCACATTCTACAAGCAGAAGCAGGCGACCACGGTC
CGTCATCGGCGCACAAATATCGTCATTTCTTTGTCAACCTTCAACAAACA
ACTCCTGAGCTCGAAAGAGCCGTCTTGGATATTTACACACACATGGGAGG
GATGGATCCACCCACGTGCGAAATGAAACTGATGGAGAAAGCACTCACAG
TCACTTACTACAGTCAAGAGATCTACCACGTGCGCTCTGATGCTCAACCG
GGCCTCAAGAGGTTGACCCTCACCCTGGGTCCGATTGGGATCGGATTATA
TCAAAATTCAGTGAAGTTGGATATTTTTAATTGGATGGAAATTTGGAATG
TTGGCTACATTAATTCCATTTTCTGGTTCCGCGTCATGAGAGAAGGGGAG
AAAAGCAAAcataaatttcattttaataacAATAAAACGTGCGAACACGT
CTGGAAAGCTTTTCGagatttctttaatttctacATCCAGGAACGAAAAG
TAGATCCGAAGTTAATGTGGGGCCGCCAGCCACCCAAGGTGCAACGTCTG
ACATTGTTAAGCGACGCCCACACACCAGCGATGCGACACGCAAATGTCGT
CCCAAAAATCTCTCGTGATAATTTCTCAAGCCTTATTGTTGATCCTGGTA
ACTATGGAAACCCAATAATGGCGGACCCTTATGCTAACGGAAACAAAATT
CAACTTAGCAAGCAAGATTCGGGACCCAAGTTGGTGTTCACCTCCGACAA
GACGTTGACAGGAAGCGGGCGCGGTCTCCAACAACAGCCAGATCAACAAG
AAGCGAGAAACGGCAATCTTCAAAACATGTTTCGACCTCATGACGAGGCT
ATGTTCACGGTACCGAAACAAGGCGAACAGCCGCATCACGAACAGGAACA
TCAGGGCCCACAAACAGCGGTTCTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020026-exon-sc0000348-1491911889:78794..79742 | TCONS_00020026-exon-sc0000348-1491911889:78794..79742 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1510915933:78794..79742 | TCONS_00020026-exon-sc0000348-1510915933:78794..79742 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1575043694:78794..79742 | TCONS_00020026-exon-sc0000348-1575043694:78794..79742 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1491911889:79954..80045 | TCONS_00020026-exon-sc0000348-1491911889:79954..80045 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1510915933:79954..80045 | TCONS_00020026-exon-sc0000348-1510915933:79954..80045 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1575043694:79954..80045 | TCONS_00020026-exon-sc0000348-1575043694:79954..80045 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1491911889:80542..81304 | TCONS_00020026-exon-sc0000348-1491911889:80542..81304 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1510915933:80542..81304 | TCONS_00020026-exon-sc0000348-1510915933:80542..81304 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1575043694:80542..81304 | TCONS_00020026-exon-sc0000348-1575043694:80542..81304 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1491911889:81357..83325 | TCONS_00020026-exon-sc0000348-1491911889:81357..83325 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1510915933:81357..83325 | TCONS_00020026-exon-sc0000348-1510915933:81357..83325 | Clytia hemisphaerica | exon |
| TCONS_00020026-exon-sc0000348-1575043694:81357..83325 | TCONS_00020026-exon-sc0000348-1575043694:81357..83325 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348 | supercontig | sc0000348:78794..83325 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005856 | cytoskeleton |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005856 |
cytoskeleton |
Blast
BLAST of TCONS_00020026 vs. Swiss-Prot (Human)
Match: NPRL3 (GATOR complex protein NPRL3 OS=Homo sapiens GN=NPRL3 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 3.151e-65 Identity = 137/411 (33.33%), Postives = 220/411 (53.53%), Query Frame = -2
Query: 2495 RVRYLSNQHEIMVL---EIDRIEDLPESEQNVHERTLAKSQLAKDIVSAFQSMCDYGIVNINVNGWLGLNYCFPHKIHKAEIRETMIDTSKFNTYIRRIKPYXXXXXXXXXXXXXXXXEIANLIKILPPDASPVLHRLITLSRPVKNFQTLCQDADISLPQIFQIVAHLIYWGKCIVIYPLAESNIYVLAESVPTEIDSKCSEEFTKKFPEQSLHNVFQKFSFPLTLGDYRNPLCND-KHVEHAQIVTWLLKKRLIKQLHTFVYMVPMAAIDLERDNEID----------------------PVEQRNTFF-------QRFQLKGTGD--------KTIFDAFPVAMQLSIISVSYLVERDDMLFFLRMTKYFDGEHHLENIMYFENVSRSKLIICIDKFRSILITVQHQD 3604
R +YL+ + ++++ E+ + D E Q+ L K +LA+D+ A+ S+C G+V +++N WL +++C PHKIH A ++I ++ I+PYH LLL D+ +L+ LP D SP L R+I + VKN Q L QDAD++L Q+FQ+ AHL+YWGK I+IYPL E+N+Y+L+ + + S +E+F+ +FP L +V KFS P++L ++RNPL + + Q+V W+L++RL+ QLHT+V ++ + + R E D P + +L +GD + + + + +I+SV +D+ F R+ YF G HHLE IMY EN RS+L++ DKFRS+L+ H+D
Sbjct: 159 RCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA--SSLIPPEAIERSLKAIRPYHALLLLSDEK---------SLLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHED 558
The following BLAST results are available for this feature:
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