TCONS_00020012 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020012
Unique NameTCONS_00020012
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length115

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020012 ID=TCONS_00020012|Name=TCONS_00020012|organism=Clytia hemisphaerica|type=transcript|length=115bp
GAAGCTCGTGTATATGCTTTCTACATGGTCGCGTCcttttgataaacttt
tttggTGTTGTTTTACTATCATAGATGTGGATATGCTTATACACCTAGAC
CATGTCACAGAAAAG
Run BLAST on NCBI

transcript from alignment at sc0000345:192125..192239

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020012 ID=TCONS_00020012|Name=TCONS_00020012|organism=Clytia hemisphaerica|type=transcript|length=115bp|location=Sequence derived from alignment at sc0000345:192125..192239 (Clytia hemisphaerica)
CTTTTCTGTGACATGGTCTAGGTGTATAAGCATATCCACATCTATGATAG
TAAAACAACAccaaaaaagtttatcaaaagGACGCGACCATGTAGAAAGC
ATATACACGAGCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011244XLOC_011244Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020012-exon-sc0000345-1491911889:192125..192239TCONS_00020012-exon-sc0000345-1491911889:192125..192239Clytia hemisphaericaexon
TCONS_00020012-exon-sc0000345-1510915933:192125..192239TCONS_00020012-exon-sc0000345-1510915933:192125..192239Clytia hemisphaericaexon
TCONS_00020012-exon-sc0000345-1575043694:192125..192239TCONS_00020012-exon-sc0000345-1575043694:192125..192239Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345supercontigsc0000345:192125..192239 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020012 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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