TCONS_00019159 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019159
Unique NameTCONS_00019159
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2680

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019159 ID=TCONS_00019159|Name=TCONS_00019159|organism=Clytia hemisphaerica|type=transcript|length=2680bp
attagatttaaaagaaaaatagaaagcAGGAAATAAAACTTCATAACCAA
GATGACGAACGTGACGATTCCAAACAAGCTTTTCTACAAAGAAGCCATGG
ACCAAGTTCATCTTTACAATTCCAAACTATTGTTGGATCGTCGATTGCGA
ATGCCTTACATTGATAGTCAAACTGGCCTTGCACAACAAGATTGTCATTT
ATGGGTTAGTCGCGTGCAACGTTCCTCCCCCATCCGTGAGGGTCAAGTGT
ACAGCTATCCATCACGTAGATGGCGCGTCAGAAAGCGGCCCGACTTTATC
GGCACCAAAAGCAAGATAACGGAAAAACAAAAGAGTGAGGATGACGGCCA
agGAACGACAACCGAGACAACGGACAGCACTTTGGAAACGATAGAAGATT
CGAAGACCGCTTTTGATACCGCCAGTCAATCTTCAACTACCACGGGCGGT
GGTGGCGGTGGAAATAGCAGTATTTATGAATATTATGACGACATGGCCTT
CGATTCTGAGTTTGATTCCGATGAGGAATTTGGTAgcagaaagaagaaaa
agaagggcGGCAAAGTGGCTAAAGGCAAGAAAAATGCTATGGCTTTGAAA
TACGCAACCAGTATCAAGGTGATGTCGAAAGAAGAATTGAACCTTCTTTC
TTCTGAAGATCGAAAGAAGCCTTACGACTGTCAAATTTGCGGAAAGCGTT
ACAAGAACTCGCAAGGTTTGCGGTATCACTATGAACATCACAATCACGAT
TTAGAAGAGCAGCAGCCCGCCCCTCCACCTGCCCCACTCTCATCCCTTCC
ACCACCCATCGATCCGATCCCTCCGCCTATGCCCGCCCTGACCGTTCAAC
CGGTCGAAGCACCACCTCCCAATCATATTGCAGGAGCCAAACGGGCGAAA
GGAACGCCACCAAGTCATTTCTGTGACACCTGTCTGGGCAACGTGAATGC
GAACAGACAAGGATCTGCGGAAAGATTAATTTGTTGCGCAGACTGTGGNC
CTGTCTGGGCAACGTGAATGCGAACAGACAAGGATCAGCGGAAAGATTAA
TTTGTTGCGCAGACTGTGGCCGTTCAGCTCATCCATCGTGTTTGACATTC
ACGGAGAAGATGACAGAGCAAGTGCAGAAATACCGATGGCAATGTATCGA
ATGTAAATCGTGCTGTTTGTGCGGCACCTCTGACAATGATGATCAGTTGT
TGTTTTGCGATGATTGTGATAGAGGCTACCATCTTTATTGTCTCAACCCT
CCCATGGGTGAACCTCCTGAAGGCCACTGGCAATGTCAACTTTGCAACTC
ACGCATCCAAGGTTTGGATATTTCCCGTGTTGCAGTCTTGCCGGAACACA
TGGATGCCGCCCTTCATGCCACGCCTTCCAAATGAACAAACAAGAAGACA
GGTATGAATGGATTGTTGCTGGTCCTTGCAACCGTACAACTGCTCGTTTT
TTCCGTCCACAGTTATTACATCATCAAAGAAGAAACGAGATCTGATAATG
ATTTTGCTGACGATGCAGAAACCGTCCGTGATGGCATGTCATTCGTCACT
CGACCACGCTTTTCAAGTAACTTGGACAAAAAACGCACTGTCGATCTTTC
AAACGACTACCTTCAAATTCGTGACGAGATTAACGATGACCTGAATGAAA
AAGGATATGTCATCGTTCGTGATGTCACTGCAGACGGTAAGAACGAGGAA
AATGCGGAGCGTCGTCAAATGGATCTTGTGGGTGGACATCGTGGCGTCAA
ATGGGGATTCTTCAGCCCTCAAAAGAAACGTGATTCTGCTCAACCAGTCG
ACTCACGCGCACGTTTTGGTGGACATGTTCGCGAAGCAGACTCTCCAAAT
ACCGCCCATCAACGTCTCGTATTTTCTCGTATCGGAAAACGATCTCATTC
TATCCCTTATGCTGGTATTCATCGACCGCGGTTCAATTCAATGACTAATA
GTGAGAAACGCGAAAACAAAAACTACGAAATTGTGGCCGTGATCAAAGAA
GAGGATTAAGCAGAAACATTTTCCGTACTCAAGTTGTGCACAAAGACTTT
AAAACAATATTCTTATTCCGATATTTAGTCCTGGACATCCCAACCGACAC
CCAGCATCTGGGGATTCGTGAACACGACATTTTAGTAGAGCTTTTGTAAA
AACGAAAAGTAGAAATATAAGGCTAGTTAGCTAGCTAGTAAAGCTAGTTA
GCTATTATTCTCTGTTTTAActtttcttggaagattgaaGTAATGTATTT
CGTATCATTTTTGGAAATATCTCATTCACCTCTGATTTTGTCGGGATTAA
GTTCTctaaataattttcttcttcatatcAAACTAGACCTTATTTTTAGA
CATCTTTTTTCGAAATACGCTCATGATACATATTTTATTGGATTTTGAAA
TTCATCCTAAATGAAAATACTCcctctgaaaaatttgataagaTTTGATA
TATAAGATATATCTTCAtgaatcagaaattttcattgttGTTTGAAATAA
GACACAGTTGCTGTTCTCGCGATTTTCCCATGTCGATTCATTggtctttt
tctaattttattttattttgaaaatagagATGAAATCTGAAAACAAATCA
TACATTCAAATAACAATTCTGATAAGCAGTTGTAAACGCGATGTAGGCGT
CAAATTACAGTTCCATTTTATCTTCAGGAA
Run BLAST on NCBI

transcript from alignment at sc0000320:19404..34561+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019159 ID=TCONS_00019159|Name=TCONS_00019159|organism=Clytia hemisphaerica|type=transcript|length=15158bp|location=Sequence derived from alignment at sc0000320:19404..34561+ (Clytia hemisphaerica)
attagatttaaaagaaaaatagaaagcAGGAAATAAAACTTCATAACCAA
GATGACGAACGTGACGATTCCAAACAAGCTTTTCTACAAAGAAGCCATGG
ACCAAGTTCATCTTTACAATTCCAAACTATTGTTGGATCGTCGATTGCGA
ATGCCTTACATTGATAGTCAAACTGgtaaatgaaattttaatgGCATTGT
TCATCTTaagcaaaactatttttttgaGCAATAAAGTGATTAGAATAGTC
ACGGTTTGCACAAATCTACGAGGCAGTGTTTTTAATTGTGACTAGTTGCC
CAAGTATAGAAAATCTGACGCAATAGCCCATCCACTATTATAATATGTGT
ATTCGCTTTTTATAACAATAGTTAGAAATTTATGTCTAATTTTTACTACA
CTTTGAATTCTTTGATTTCgattttggaaagaaaagatttttgattgTTG
AAGTCACGCAGACGGTTGTATTGACCAAAATACTTGTTTCTCTTCCCTCT
CTCTGAATGTGTAGCATTATTTCTTTTCAGGCCTTGCACAACAAGATTGT
CATTTATGGGTTAGTCGCGTGCAACGTTCCTCCCCCATCCGTGAGGGTCA
AGTGTACAGCTATCCATCACGTAGATGGCGCGTCAGAAAGCGGCCCGACT
TTATCGGCACCAAAAGCAAGATAACGGAAAAACAAAAGAGTGAGGATGAC
GGCCAaggtatttttctttgtttttacctCGAAAAAGTGAAGAACTGATG
TTCTTAAGCATGCAAAGCTAACTCTCTCAAGTTGGACGGATTTTTTGGGA
AATAGTCTATTATATTTCCTTCCGTGAGTTTATCCGTGATGATTGTGGTG
TGAGTATCAATGACCCACATCAAGTTGTGGTACCATTAGGGAACTACTTT
TGGAGAGCAGCAATTAGGATTTTGTTTGGTCGGGATAGAAAATTACCCAC
ATGTATGGATACCTCTGCCCACATCACTTTTcgagttttgaaacttttta
gaTAAGTTTGTTTGTTGGCCCCTTCGAGTGATACagtgttttattatata
tttctAAGGAACGACAACCGAGACAACGGACAGCACTTTGGAAACGATAG
AAGATTCGAAGACCGCTTTTGATACCGCCAGTCAATCTTCAACTACCACG
GGCGGTGGTGGCGGTGGAAATAGCAGTATTTATGAATATTATGACGACAT
GGCCTTCGATTCTGAGTTTGATTCCGATGAGGAATTTGGTAgcagaaaga
agaaaaagaagggcGGCAAAGTGGCTAAAGTAAGAAAAATAACACGCTAT
TGTAATGTTCTAACGCCCACTACAAAGTATTTAGAGTAAAAGCAATTAGT
TcttctttttaattaaaatattttcttacaggCATTAAAGTGCATAATGA
TGTTTTTAAAGAAGATGTTTTGAAATTGCATTCGCTCTCTATTCTACTTG
CTATTCCTTGGTCTGTTTGTTCGTCAACGGTTGAAGAtaacattttcatt
tgaaaccaTGATTAATTCTCTTCACCCTGTTTTCAAATTCTTTAGCCTTT
CTCGTCCTTTTCTTATTCTCACATCATTTTTCGTCGTAAGTTTTTCATTA
GGGCCATGGCAAACCAGTctaacatttcatccaacatgactttccaatgt
tggatgaaatgcttgatggaaaaacttgcgttggatgaagcgaaaatcaa
ggctggggcaaaccgatccaacattttATCCGACATGACTtgggaaaaaa
tttaaaattcaaaaaataaagaaaaaagtactaCCAAACCAATGcaacac
gaaaaattacacaattcaatgaaagagcttctttgatctcgccgcaaatg
ttgaatgaaatgtttgatggcgaattttcatttctttccaaaaatttgaa
ttgacgcaaaccggtccaacatttcatccaacataaAAAAAAGGCATGTT
agatgaaatgttggattggTTTGCTCCATCCTTTACATCACAATTAATGC
AGCAAACCTTTCCCCTTATCTTGCCTTGAATTCACCGAcaatcatttttt
gaattttaacacaaaaacaatcttgaatttctcaaatgaaagaccctTTA
CTAGGATCCTACCCATTAGTGAGATAAAGTTCgcataaaatgtttttatt
ttaacgTTCACTATACAGGGCAAGAAAAATGCCATGGCTTTGAAATACGC
AACCAGTATCAAGGTGATGTCGAAAGAAGAATTGAACCTTCTTTCTTCTG
AAGATCGAAAGAAGCCTTACGACTGTCAAAGTAAGTTTAAAGATCACAGT
TTCTGTCATAATACCAAagataatagacgatatcggcttaacgtgaaaac
tcagatttgacccccgaaaatttcccaaaaagcattgtggggaattctcg
gtggtcaaatctgagttttcatgtgaagCCGATATTGTCTATTGGCTGTT
TGGGCTCCCCTTTCATGTTTTTAAACAGTAGCGACAAGTAATAATACACG
GTTTTTTTCGCTTATTTCTCTATAGTTTGCGGAAAGCGTTACAAGAACTC
GNGAGGAATTTGGTAgcagaaagaagaaaaagaagggcGGCAAAGTGGCT
AAAGTAAGAAAAATAACACGCTATTGTAATGTTCTAACGCCCACTACAAA
GTATTTAGAGTAAAAGCAATTAGTTCTTCTTTTtaagtaaaatattttct
taaaggCATTAAAGTGCATAACGATGTTTTTAAAGAAGATGTTTTGAAAT
TGCATTCGTTCTCTATTATACTTACTATTCCTTGGTCTGTTTGTTCGTCA
ACGGTTGAAGATAACATTTTAATTTGAAACCATGATTAATTCTCTTCACC
CTGTTTTCAAATTCTTTAGCCTTTCTCGTCCTGTTCCTATTCTCACATCA
TTTTCCGTCGTAAGTTTTTCATTAGAGCCAGGGCAAACCAGTCTAACATT
TCCTCCAACATGACTttccaatgttggatgaaatgcttgatggaaaaact
tgcgttgGATGAAGCGAAAATCAAGGCTGGGGCGAActgatccaacattt
catccgacatgacttggaaaaaaattgaaaattcaaaaaataacgaaaaa
agtactaccaaaccaatccaacacgaaaaattacacaattcaatgaaaga
gcttctttgatctcgccgcaaatgttgaatgaaatgtttgatggcgaatt
ttcatttttttccaaaaatttgaattgccgcaaaccggtccaacatttca
tccaacataaAAAAGGCATGTtagatgaaatgttggaccggtTTGCTCCG
GCCTTTACATCACAATTAATACAGCAAACCTTTCCCCTTATCTTGCCTTG
AATTCACCGACaaccattttttgaattttaaccaCAAAACAATCTTGAAt
ttctcaaatgaaagaccctTTACTGCTTTACTGATCCTACCCATTAGTGA
GATAAAGCTCGCATAAAACGTTTTTATTTTAACGTTCACTATACAGGGCA
AGAAAAATGCTATGGCTTTGAAATACGCAACCAGTATCAAGGTGATGTCG
AAAGAAGAATTGAACCTTCTTTCTTCTGAAGATCGAAAGAAGCCTTACGA
CTGTCAAAGTAAGTTTAAGAGCAAAGTTACATACAGATCACTGTTTCTGT
CATAATACCAAagataatagacgatatcggcttaacgtgaaaactcagat
ttgacccccgaaAATTGCCCACAATGGTTTGCGCGGAAAAAATTTCACGG
TGAAATTATTTCCGCACagagcattgtggggaattctcgggggtcaaatc
taAGTTTTCAGgtgaagccgatatcgtctattggctGTTTGGGCtccatt
ttcatgtttttaaacaGTAGCGACAAGTAATAATACACGGTTTTTTTCGC
TTATTTCTCTATAGTTTGCGGAAAGCGTTACAAGAACTCGCAAGGTTTGC
GGTATCACTATGAACATCACAATCACGATTTAGAAGAGCAGCAGCCCGCC
CCTCCACCTGCCCCACTCTCATCCCTTCCACCACCCATCGATCCGATCCC
TCCGCCTATGCCCGCCCTGACCGTTCAACCGGTCGAAGCACCACCTCCCA
ATCATATTGCAGGAGCCAAACGGGCGAAAGGAACGCCACCAAGTCATTTC
TGTGACACCTGTCTGGGCAACGTGAATGCGAACAGACAAGGATCTGCGGA
AAGATTAATTTGTTGCGCAGACTGTGGNCCTGTCTGGGCAACGTGAATGC
GAACAGACAAGGATCAGCGGAAAGATTAATTTGTTGCGCAGACTGTGGCC
GTTCAGGTAAGGGACGTTTTCTCTTCAAAATACTATAAAAAATGTGAAAC
AATGGTTATTACATTACACTAATATGGAATGAGTTTTGCTCAGTAAATAA
ATGTACTTTTTGCTGTCACATAGCTCATCCATCGTGTTTGACATTCACGG
AGAAGATGACAGAGCAAGTGCAGAAATACCGATGGCAATGTATCGAATGT
AAATCGTGCTGTTTGTGCGGCACCTCTGACAATGATGTAAGTAACCCTTG
CAATGAGAGTTCACAATGTTAATTCGTTCTACCACGCTGAAAATGTTGAT
CAAAATTATGTTTTCAAATCAAGATGGTTATGAATGGTGCGAATGACACA
ATATTCAGTTAGTAATAGACTTTGAGTcaaatttaaaagtttattttata
CCCTGTGGCGGACACTTTGTTCCCACTGTTTCTTTTATGAAACCAGTTTT
TACTTGTGTGTTCTTTTTCAGGATCAGTTGTTGTTTTGCGATGATTGTGA
TAGAGGCTACCATCTTTATTGTCTCAACCCTCCCATGGGTGAACCTCCTG
AAGGTATCAAAACCTCTTCTTTTTTAGTTAAGGTCAAGAaaaaaatgagc
gattgacaaCGATTGAATTGTTGTtcattttgatattatttttttgtcgA
CGGTATTTTGAGATTTATTTATGATGTATTTTTCGGTTTAGGATTTGTTT
TATTTCTCGAGTTAATTTGATTGAATGCCCTGTTAAAATTCTAGAGAACT
AACTTTTCTTTAAGATTGTTTGAAGTTTCTGTTGTCATACTTTTACCAAc
gtaaaaatcataatttttagGGAGCTCCGagccaaaatgaactttttttt
taacgGAGGCTTGTGGTGGCACTGTCACGTCGAATCATTTTGGTATAATG
TTCTTCTTCGCCACTCATCCTTGTTCTTCTTTTATTAGGCCACTGGCAAT
GTCAACTTTGCAACTCACGCATCCAAGGTTTGGATATTTCCCGTGTTGCA
GTCTTGCCGGAACACATGGATGCCGCCCTTCATGCCACGCCTTCCAAATG
AACAAACAAGAAGACAGGTATCTtcatttggcccaaattttaggGTTGTT
CTTTTATCATGTTAGCGACGACATAATGACATCACAGCCTCTGTTCAATT
CAGACACATGGAAAAGTTGCTCGTCTTTTCTTTGTTATGGCATTTGTGAG
ACAAGATTTTGAATGGCCAACATAGGAAGCTCGTCGATAGTGAATAATGG
CAgatatcaaaaaagtttcaatgattattttcaatgaaaacagTTAGTAA
CACATTTACCTTGTTGCTAGAGACTTACCCGATGGGATATCTCTATTCAT
GGAAGATGAAACATTCAGCTGTTTTCACAGATCATACGAGCAGAAACATT
ACAGATATGTGTGATGGTGTttctattttatcttttttttatttatgaaa
catttttaatggaataattttaaattacttGTGGTGTTTTTATATTTCAC
ACTTTGAAATTGATGATTTGATATTAAGCTCCCTGATGGTTTGGGAACTT
TTGTTTTGAGATACTGAGTCTTATTTTTCTAACGAAACAACATGATACCG
TGCTTAGCTTAGACTATCAGTGCCTTTCAGTCATCCTTTCTTTCTTCCTT
CCTCCAAATATCTCCCTTATTGACGGTTGTCATGGATGGTTTCGTTGCTA
CTTGTTGAACAAAATCTCGCAATTCTCGTATCAACCGAATGAAAACTTTA
CTTTGGCGCTGTGCTTTATCTTTAAAAAACGTTTGATTTGTTTTAAAAGG
AAACTAAAACATCTTATTTAGAAGGTAATTTCATTTACTTCTAATGTCAA
GGAAGAAAGAAACTAAATTGACTTGAGCTTTTAAAGTATATTGTTTTCAG
ATAATATTGCGAGACCTTTTTGACCATATGCATCAGCTAATCATCAAATT
TCGACCAGGAAGTTTCTCCTAGTAATAAATGACATTAAAACACCTATTAT
TATACAttagtgccgtaggaagcatttttgTATCGGGGGGGCTGAGGTTT
AGGGgaaattttaaaacttgaaGCTCAAAATGGCCGGAAAATGCACTGAA
AATGAAGTTTTATTTggagaaaattttccatttcataAAAAAGCATTTCT
cgaaaaattattggggggcaaCCCCCCGGTAGCTACGGCACTGCATTACC
CAATTTGAACCACCTTGTATTAatttatttcattaaaaaaagttgaagta
tATGGCCCAAGTATGTAGGTTTTAATTCAAATGAGTATTCTATCGCATAG
ATTAGTCGAAATGAGACGAAtttttattacatgttttttttttataagca
agtgtatgccccttggtcaggctcgtgtatgcttaagttctcaaagcatc
caggcatagtttatgcttattatatgcttaagaattatgcttatgattca
ccccgagccaagttttttaatgaattcagaaattttgtattttgaatgca
gctagccgtggaatgtcttatttttttacttggcctctaccaaaccagat
aaaaatgaaacaaaaacagataaaaatgaccacttgaaaaatatttcagg
ctgacatatatgctcatgttatgcttaggaattctgcaaatctgagcctt
catatgcttataagcgttatgcttataaaaaaacaacatgtattttagta
agaaaaacatattttaaatGTTGCCTCAAAATCTGCCAAAAATTGCATTA
AATTCTCTATAGCTCCTTAGAtattgaaatttagaaaatgtagAGGATGT
AGAGTGGGTTGTCCAGTTGGCGTGAGTTTATGAAAATCTCCGTTTATATA
TATCGGCAGCATATTTTCGCATTCAAATGGTCACTACCAAAGTGAGTAAA
TAACACTTATTTGATTTATTCAGTTTGATTtagttttttgtttataactG
TTTAGAAAAAACTTTAAGTTTAGTCTTAGCCAGTTTGCGtagtaaaaaat
atatatagtttggtccagggatatataaaggtcatgGTTGAAATGGaggt
taccttaagggaagaaattttggcgaattacCTGAAAATTTCgctaattt
tgccaaaatttctttccgccaaattaaaatttttaggtcgttcgccaaaa
taaattctcgccaaattcaattttcttttaatttagtgtctatttctcct
aaaaacccattttttcctatttttttcaGCTGAAATATTGAGCAAAAATG
GGGCgttcgcaaaaattaattctcgccaaattaagaagttttattaaatt
tcctaaataaatttccaaattgcaccaaaattggcgaatggatatataat
ataaaggtcagtgggtaaGCTCCATGACGTCATCGAATCTAAAATCTTCA
ATATTTGTTGACTGAAACCACTTTAGGCAATAAAATTTGCCACACTGAAT
GATATTCAgattaagaaaatttataaatttttctgctgacgtcagcagga
ataagcaaaaaaacgaNATATTCAgattaagaaaatttataattttttct
gctgacgtcagcaggaataagcaaaaaaacgaatttttgcaataaaatgc
tgacgtcatcaattttttcaaaaaattttttttgaaagtctaGTTTACCA
CAATAcctttcagtgtgcaaaattttagctttgcaatcaaagtatatcaa
gagttattgcaaaaaacgattttatgacgtcatcagatggcctaaaattg
aaatttcttaatttttgagccaaaattttgaaaaattgtaaatttttata
ttCAGTATCACGAAACACCATTTTCAGCACCGAAATAAATCTAAATGGAC
ATTCGATATCGAAATCCTGAATtttaattgcaatttttgttactttttac
ccccggattttttCGTTACCTCCCAATATAAAAGTGATAttaattctgtg
aaaaagtaaaattttatcaaaatttttttttcaaactgtagTATGATGAT
CAAACATcagctgaaagaaaaaaatcgaaaaggtGTTCACCTAAACTTGG
GTTATagccaaaacttgctcaaaaataagtttttttgactaaaaaaatgc
cTGTTTTTTGNCTGAAGAAACAGAAACttgaaaaaagtcaataaaattta
taaaaaaaaaattaattaagaaaCATTAATTATCGCCAACTCTTGAACGA
GAATTATTCAGTTCAATATCATTTGTATTCAGTTCTCTACTCCAAATGGA
ACGGGATCCACGAATACATAACAAAGACGATCTCAACAAGCTGAATGATA
TCTTTGATCGAATAAACGAAATCGATTCACGGAGACGTACACCATGTTTT
TCCGAAAGCATCACGGCCAATCTTTTGTAGAATGTTTGGCATTCACGTCC
CATACCTCCGTTTGTAGAAAATACTAATGGGGTGAAAGTACCATTTTCGA
CACTATTCACACGTTCATTGTAANGTAAATGCTACAGAGGTCAGCGACCC
CTCGTTGAAACGAGAAAATATAGAGCTTTCCAATGAACCAAGTTTGGACA
GGGGTAgttaaaagttcgaaaatcggcttaatataaaggtcagtgggtaa
GCTCCATTTTTTCATGGTACCCTTATAATATCTTCGATATCCTCTAAACg
gttaaagctttttttatgaaACCTTTTTTAATTGCTAGAGGAAGAGTTCT
TCTCAAATTGAATCCATATATCTTTCATATATACTTACAATAAGGGNTGG
ACGTATTCGCGGTATTGTGCGTCAGTCCTTCGCCGTCAAGGGTGATTAGT
CTCGGCTCGTTTCGTACGTTGACGCATACCTCATCCAAAAGTTTAGCAGT
GATATCTCGTACCTCGTTATGTCTAAGAGTAACGTAGCCTCCTTTCTTGC
ACGACAGAGCATGGCTGATATCAAAACGACTACCACAGACACATTGACTT
GGTAGACGAGGGATATTCCAGTCATAACGAATTCGCAGTGCATCGTGAAA
CTGTTCCTTGTTAAGATCATAGCCTTGATCTCTGATTGGAAGGTTGGTCA
ACCATAGCAACTGGCTTCGTGGATACGTTTTTGATCATCAGTCATTTCCG
CCCTGATACGATCTTGCTTGTCGTGATTTCTTTGGATTTTCTCAGTTTTG
ATCGCTGCtttagtttttgtttcattGTCATTTGGTGGTTGGAGGTTCAA
GATTTGGTTTTGTAGATGTTTGGTGAATTGTCTCGAGTTTTCGTGTTCGA
TAGTTGCGACTCACATACGTATTTGAGACTGAGGTCTAGGTGGTAATGAT
AACAAGTCTCTTTCTAAGTCATTTacaattttaccccctgttAATGGCTG
GAATGAGTTGGTGACTGACGATTGTTTGGATGGGTGTTAAGTAGTTTTCC
ATTTctggaaatgttcttaaaaaatacgaaaaacgATGCTGGTAACCGCT
GGTGTAACACGTGTATGCTGATTGTGGTTGAGTTACCGCTTTTTCTGAAA
GAAGAGTAAGTTCCTTGCACCATTTATCAACAATTTCCTTACAGTAACGG
TCTTTGAAGTTTATACTACCAATAACTGCACCGAGATGCCTTTCACCGTC
TTTCGAGATCTGGATGTTCGTTTCccggaaaatttcttccgccTCTTCCA
GGTATTCCTCTTTAATGATTAGCCACGATTTAGTCGGCTGTGGAAAGTAG
CCAAAGTGAGGACCAACGGTTGTAATTCGTGACCACCAGCGTTTTAACGA
GAGAAGCTTTCCAACAGAAGTTATATCGTCGGCGAATGCTGCCATTTTAT
CGAGAATATCAGCAATTGTTGATAACATTATATTCAAGAGTGGTGTtatt
tagtagggggaaatttgttcgttttttttgaggttttgaggtcgctcgac
ttttttagtcaaagcacattaatccttaaaaacagtggtttttagtgttt
ttcagccagaaacagctgttttgtccagtttttgcgctttcggaagctca
atatctcgagttaggtactgaaatcacctNCGATGATAACATCCTCTTTA
ACGACTGCCATTACGAGCTTTCCACTGATGCGCCTCAAAACCTCTCCTAC
GCCAATTGGTCGAACTCCCGGTTGTTTATCAAGCGGGACTAGTCGTGCAG
CTAAGAAACCCTGTAATGATTCATCTTTAGTTTCTTGGGTGCAAAGTTTT
CGCGTTAGCTTCGCGATCGATTTTCGAAGATATTTTCCACAGTCGCCGTA
AACTTTCGATGTAAGTGGTTTTCGCCATCCATCTTCGTCCATACCCGATG
GTCCCGATCCACCTTGTGTCGATAAGGCTGCTTTCGATACCATCTCTTCA
TCAATACACTCAAAAACAATCGGATCTATATGCTANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttgagagctttccaa
aaatatacaacaggtctccgttttctcaagctagaattttcattaatttt
tcaccctatgatttttgcctgagatcGTCGTATTTgcccgaaaatcacac
caaagtgtccgaaaaaaaattggcacccaagttattttgattcccctacc
ccttagctttccaaaaaNCTCATGTTGTTGGTGAGTAGTTTGATTGCCCC
GTTAACATCgcctttttccatttttatcttAAATTTCTTCGATAGAGCTT
CAATAGTTTTCTTTTTGACCGGCTTTGGCAATCTCGATTGAAGTGTCTCG
GCCTCTTTGACAAGGGCTTCGATATCTCCTCTTCGCCATTGGAGCAGTCT
CCTCTCTAATGTTTCGACGTGATCGTGGGCTTTGGAAGTTTTGCTTGGTT
TCTGAAGAAGCAAAGCTGGCATTATATGGACAGCTTTCATAGATACAACT
CCGAGAGGACTATCTTCGATCCATGCATTGAGTAGCCTTGTCACTTCTCG
GATGAAATCTTTGCCTGTACGTCCACTGGGTAacttgaaaagattttttc
gcCAATAAACTATCTTTTCATAACTATTGTTTATCAGTCTCTCAAAGTCA
GTTCCTTTGATATCTCCCCANGTTATTAAAAGCATTAGAAGCATCAACTA
GTATTACTGCTTTGGCTGTTTCGTTTTCAAATACAGATCGCATCGCGTGG
ATTGCTGCTTCACTGCCACCTTTCTGGCCGGAACACATCTGTACTCTACT
GCCACCGATGATAACATCCTCTTTAACGACTGCCATTACGAGCTTTCCAC
TGATGCGCCTCAAAACCTCTCCTACGCCAATTGGTCGAACTCCCGGTTGT
TTATCAAGCGGGANGATCTGCAACTATTTTGCCTTGTCTTTGATGTTGAA
GAGCACCTCTAGCAGTACGGAacagttttccacattttacaCATGGAACA
GACGGTTCTTCTTGATGCGTACTGTTTACTGTGGCGGGATCACCGGCTTC
TGCAATCATGGTTTTCTTCTAAATCagcttttgaacatttttgtaCTTGA
TTCTTTTTCAGCAATTCGTTGCgtgatcaaatttttcaatgttcaaaaat
aattttcacaaGATTGACAGTTAAGCGTCCGCCATCTTGCGTTGCCACAG
TTCTTCTTCCGTACGGACTTATTTTTTGCGAGGAAAgatcttcttttttc
ttctcaTAAGGCgattaaatgaaaaatagaaaaaaaactattgcgcaaat
tttcatttttccgaTTAGGGTTACAAAATTGTGTACCCTAGCTGCTATGG
TTGATCTTTATTTCGAAATCAAACTTGATTTTCACTGAAACACCATATTT
CGTTCAATTAGTGTGCAAAGTTGAAAATCACGCCAACTGGGTTCCGCACt
ctataggaaactttctaaaCCTAATACTTATACTAGCTTTTTTATAAAGA
TGATGTTTTATTTcatgatggatattcttaactttttgaggaaaaatatt
cttaaggtaTTATGgtatattcttaggttaggatccaacCCAGCCTAAAT
CTagcatgtaatacatacctcGAGTAAAGAAAtggcaattttttgaaagt
ctttagcattgctacacccctgtgtcacagacacgccgggaccccagccc
cactggaaaatttggcaaaaaatgtCGTCCttggtgggaaaataccctga
aaattCAGCCCCACAAGGAAATTGACTtcgattttatccccattcgaaat
tcaatgtttaaaaattgcacttcaaacccatccccactagatttttaacc
ttggaacaatatgatttctatccccattgggatttcaatatgaACTTTTA
TGGGTGTTATAGTTTTTCGGTTATTTCGTAATGAGGCCGCAATATAAATT
TTTGACCTTTAGGGTCGGAAGAACCAGGGTCGATTCACGCTGGGATGAAG
GTTGGGATAGTCGCCTCTAATAATTATTTCTGATTGACTTTTCTTTTGTT
CATCATTCATAACTTCTTTCCTTTTCTTCTGTTACTTTGGTGAAATATGT
TCAAATTCGAAGAGcatattttagttttgatttgtttattgATTGGTAGC
CAGCGGGAAACATTCCGTCCCCCTCCTTCCCTTATTCCTTCCCCATTGGA
AAAATATTCATCGGATGGTAAAAAATTCGTTTCAAGAAGGTGTATCATTG
ACTTTATTAGACTTCTAttaattcatttcatttttcgTACGATGTTTGTA
AGTTTTTTATAAATCCCCATCTATTGGATAGAAGTAAAAGTCTATTTTGA
CtcactaatttttttcttttggaaacTTAGGCCTTGTATAACGTTTGAAC
CTTTTTTTCACTAAATCAAGTTAAGAAATGTCTCTTTTGCCCCTTTTCTG
TTTTGGTGTTTCTAACCTCATGTATATGCTAATTTCAAAACACTAGAACA
CAGCATACACGTTTTACATGCGAAATTTTTGGTTCATTTTTCACAACTTT
TACGTTTAAGGGAAAACCTGACATCACACCCGCTAAATTCTGTCGCGGCA
GTTGAAATTCAAAGTCCATAAAAATTGcctaattatgacgtcacaatagA
ACAGAGAAAGCGCTCGtgagaaaaaggggaaaatacAGAAAAAGACTAAT
ATTATCTGCAtgtttttgatatatttcatttatttttctttgataaTTAA
TTTATGACCCCAAGCTTTCTTCTTTCCTCTTCttttggttttaaattttc
ttttctaaatAATACTTTCCATTGTGTATATTTTTTAGCTGCAATTTTCC
ACCTCCTTTCTCTTCTTCTATATAAACTGGTATCAGGCCTCTTGCTCGTT
ACTTAAAACTTTCGACCACTGAGAGAACTTTGTAAAAAGGTGGTAAATta
actttgaaaaaaaggagaaatttCTTACACGATGGGTAAGCGCTTTTGTC
ATTCATTTTCATATTTACTGCTTTGTatactttgtttattttatgcGCAT
CAGGTCTTCCTGAGGTTGAACCAGTCTGCTTGATAACTGTTTCGGTATAT
AATTTCAATCGATGATTATTTTCTCTCAGGTATGAATGGATTGTTGCTGG
TCCTTGCAACCGTACAACTGCTCGTTTTTTCCGTCCACAGTTATTACATC
ATCAAAGAAGAAACGAGATCTGATAATGATTTTGCTGACGATGCAGAAAC
CGTCCGTGATGGCATGTCATTCGTCACTCGACCACGCTTTTCAAGTAACT
TGGACAAAAAACGCACTGTCGATCTTTCAAACGACTACCTTCAAATTCGT
GACGAGATTAACGATGACCTGAATGAAAAAGGATATGTCATCGTTCGTGA
TGTCACTGCAGACGGTAAGAACGAGGAAAATGCGGAGCGTCGTCAAATGG
ATCTTGTGGGTGGACATCGTGGCGTCAAATGGGGATTCTTCAGCCCTCAA
AAGAAACGTGATTCTGCTCAACCAGTCGACTCACGCGCACGTTTTGGTGG
ACATGTTCGCGAAGCAGACTCTCCAAATACCGCCCATCAACGTCTCGTAT
TTTCTCGTATCGGAAAACGATCTCATTCTATCCCTTATGCTGGTATTCAT
CGACCGCGGTTCAATTCAATGACTAATAGTGAGAAACGCGAAAACAAAAA
CTACGAAATTGTGGCCGTGATCAAAGAAGAGGATTAAGCAGAAACATTTT
CCGTACTCAAGTTGTGCACAAAGACTTTAAAACAATATTCTTATTCCGAT
ATTTAGTCCTGGACATCCCAACCGACACCCAGCATCTGGGGATTCGTGAA
CACGACATTTTAGTAGAGCTTTTGTAAAAACGAAAAGTAGAAATATAAGG
CTAGTTAGCTAGCTAGTAAAGCTAGTTAGCTATTATTCTCTGTTTTAAct
tttcttggaagattgaaGTAATGTATTTCGTATCATTTTTGGAAATATCT
CATTCACCTCTGATTTTGTCGGGATTAAGTTCTctaaataattttcttct
tcatatcAAACTAGACCTTATTTTTAGACATCTTTTTTCGAAATACGCTC
ATGATACATATTTTATTGGATTTTGAAATTCATCCTAAATGAAAATACTC
cctctgaaaaatttgataagaTTTGATATATAAGATATATCTTCAtgaat
cagaaattttcattgttGTTTGAAATAAGACACAGTTGCTGTTCTCGCGA
TTTTCCCATGTCGATTCATTggtctttttctaattttattttattttgaa
aatagagATGAAATCTGAAAACAAATCATACATTCAAATAACAATTCTGA
TAAGCAGTTGTAAACGCGATGTAGGCGTCAAATTACAGTTCCATTTTATC
TTCAGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010752XLOC_010752Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019159-exon-sc0000320-1491911889:19404..19578TCONS_00019159-exon-sc0000320-1491911889:19404..19578Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:19404..19578TCONS_00019159-exon-sc0000320-1510915933:19404..19578Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:19404..19578TCONS_00019159-exon-sc0000320-1575043694:19404..19578Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:19934..20110TCONS_00019159-exon-sc0000320-1491911889:19934..20110Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:19934..20110TCONS_00019159-exon-sc0000320-1510915933:19934..20110Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:19934..20110TCONS_00019159-exon-sc0000320-1575043694:19934..20110Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:20462..20682TCONS_00019159-exon-sc0000320-1491911889:20462..20682Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:20462..20682TCONS_00019159-exon-sc0000320-1510915933:20462..20682Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:20462..20682TCONS_00019159-exon-sc0000320-1575043694:20462..20682Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:22900..23011TCONS_00019159-exon-sc0000320-1491911889:22900..23011Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:22900..23011TCONS_00019159-exon-sc0000320-1510915933:22900..23011Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:22900..23011TCONS_00019159-exon-sc0000320-1575043694:22900..23011Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:23318..23709TCONS_00019159-exon-sc0000320-1491911889:23318..23709Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:23318..23709TCONS_00019159-exon-sc0000320-1510915933:23318..23709Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:23318..23709TCONS_00019159-exon-sc0000320-1575043694:23318..23709Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:23827..23939TCONS_00019159-exon-sc0000320-1491911889:23827..23939Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:23827..23939TCONS_00019159-exon-sc0000320-1510915933:23827..23939Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:23827..23939TCONS_00019159-exon-sc0000320-1575043694:23827..23939Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:24175..24256TCONS_00019159-exon-sc0000320-1491911889:24175..24256Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:24175..24256TCONS_00019159-exon-sc0000320-1510915933:24175..24256Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:24175..24256TCONS_00019159-exon-sc0000320-1575043694:24175..24256Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:24642..24770TCONS_00019159-exon-sc0000320-1491911889:24642..24770Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:24642..24770TCONS_00019159-exon-sc0000320-1510915933:24642..24770Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:24642..24770TCONS_00019159-exon-sc0000320-1575043694:24642..24770Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1491911889:33283..34561TCONS_00019159-exon-sc0000320-1491911889:33283..34561Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1510915933:33283..34561TCONS_00019159-exon-sc0000320-1510915933:33283..34561Clytia hemisphaericaexon
TCONS_00019159-exon-sc0000320-1575043694:33283..34561TCONS_00019159-exon-sc0000320-1575043694:33283..34561Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000320supercontigsc0000320:19404..34561 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2.93685e-07	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00019159 vs. Swiss-Prot (Human)
Match: DPF3 (Zinc finger protein DPF3 OS=Homo sapiens GN=DPF3 PE=1 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 1.230e-41
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 3 
Query: 1002 CLGNVNANRQ-GSAERLICCADCGRSAHPSCLTFTEKMTEQVQKYRWQCIECKSCCLCGTSDNDDQLLFCDDCDRGYHLYCLNPPMGEPPEGHWQCQLC 1295
            CLG  N N++ G  E L+ CADCGRS HP+CL FT  MTE V+ Y+WQCIECKSC LCGTS+NDDQLLFCDDCDRGYH+YCLNPP+ EPPEG W C LC
Sbjct:  265 CLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLC 363

HSP 2 Score: 82.0333 bits (201), Expect = 2.015e-16
Identity = 31/69 (44.93%), Postives = 51/69 (73.91%), Query Frame = 1 
Query:   82 FYKEAMDQVHLYNSKLLLDRRLRMPYIDSQTGLAQQDCHLWVSRVQRSSPIREGQVYSYPSRRWRVRKR 288
            FYKEA++    YNS+L  +R +R+P++DSQTG+AQ +C++W+ +  R   +  GQ+Y+YP+R WR ++R
Sbjct:   16 FYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRKKRR 84
The following BLAST results are available for this feature:
BLAST of TCONS_00019159 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPF31.230e-4171.72Zinc finger protein DPF3 OS=Homo sapiens GN=DPF3 P... [more]
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