TCONS_00019070 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019070
Unique NameTCONS_00019070
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length262

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019070 ID=TCONS_00019070|Name=TCONS_00019070|organism=Clytia hemisphaerica|type=transcript|length=262bp
CGAAAATAGCATATCGAAATCTCTGTCAAAGCAACCGCGCGAAAATTGAT
TAACCAAAATGCGGAGGTAAACAAATGGTGACCTAAGAGGCTTGATGTCA
GAGCCCATAGTACCTTTTCATCCAGCTCGTCAGCTTGATACAGCGTTATA
TTTTAGgcatacaaactttcgcgagcagaaactttcccGAGGTCgagaaa
tcgcgaaatttacgacatttacttttcGCGAGCTTAAACTTTCACAAATC
GTTGGATAAAAT
Run BLAST on NCBI

transcript from alignment at sc0000317:64962..65223

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019070 ID=TCONS_00019070|Name=TCONS_00019070|organism=Clytia hemisphaerica|type=transcript|length=262bp|location=Sequence derived from alignment at sc0000317:64962..65223 (Clytia hemisphaerica)
ATTTTATCCAACGATTTGTGAAAGTTTAAGCTCGCgaaaagtaaatgtcg
taaatttcgcgatttctcGACCTCgggaaagtttctgctcgcgaaagttt
gtatgcCTAAAATATAACGCTGTATCAAGCTGACGAGCTGGATGAAAAGG
TACTATGGGCTCTGACATCAAGCCTCTTAGGTCACCATTTGTTTACCTCC
GCATTTTGGTTAATCAATTTTCGCGCGGTTGCTTTGACAGAGATTTCGAT
ATGCTATTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010685XLOC_010685Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019070-exon-sc0000317-1491911889:64962..65223TCONS_00019070-exon-sc0000317-1491911889:64962..65223Clytia hemisphaericaexon
TCONS_00019070-exon-sc0000317-1510915933:64962..65223TCONS_00019070-exon-sc0000317-1510915933:64962..65223Clytia hemisphaericaexon
TCONS_00019070-exon-sc0000317-1575043694:64962..65223TCONS_00019070-exon-sc0000317-1575043694:64962..65223Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000317supercontigsc0000317:64962..65223 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.621164	2.16369	2.11684	0	1.35761	2.45685	0	2.14711	1.32977	1.29071	0.848462	4.23641	0.879911	4.70214	3.88163	6.2164	4.90124	2.0314	14.88	4.92701	2.70363	1.46072	1.99201	0	0	0.873438	4.66078	0	0.720329
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019070 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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