TCONS_00018990 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018990
Unique NameTCONS_00018990
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1272

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018990 ID=TCONS_00018990|Name=TCONS_00018990|organism=Clytia hemisphaerica|type=transcript|length=1272bp
CAGCTAATAGCTACCGTAAATTTGTCAGTTTGGCAAAACCCTCAACGAAT
GACAATAACAAAATCTCTATTATCTACACATCATGTCAAATACCCTCATG
AGGAGAGGAGAGATGAATGGAATAGAAGTTGCTCGCTCAGcaCAAAATAT
TACAATGAATTTCCCAATCGCCCCAATAGTTTTCTCCTCATGTGGATCAT
TTCTTGGCCTTGCTTACTTATTAAAAAAGAAGTCATTTCCAAAGTACTTG
AAGGATCCTGGTAGAAGGAACGCATGGTTGTGGCGAAACACATTTTGCTC
TTTGATTCACTCGTGTGCATCTGCTGTGTGGACCTTTTTCTGTTATTATG
ATGAGCCAAAACTATTGGGCGATATGGTGAACACAACAACGAACCTCTCA
ATACAACTTTTGTCCTTTTCAACAGGTTATTTCATGTATGATTTTCTGGA
TGTTGTTCTGAATGATGGCTTTCGACAAGTCTTTATCCTTACTCATCACA
CAGCTGTAATCACTGCATTCTCGTTGGCACTCACTAATGAACGTTACATG
GGTTTTGGTGTGTGTGCTTTGATCATGGAATTCAACAGCATCTTCTTACA
CATCAGACGTTTGATGAAACTTGTCAATCATTCATCTGGTTGGAAAAGCA
TCAATGGGGTTTTCTTATTGCTAACAATGCTCTTTTGTCGTATCTGCTTA
TCCTGTTGGATGGTGAGATGGCTTTTGCAGAATAGAGACTTATTACAATA
CAGCCATTATGTTGTTGGGCTGGTTGGCATGGTGATTATGACAGTCACCA
ATGTGGGTCTCATGTACCGTCTTTGGATGTCTGATTTCCATAAGAAATCA
ATCAACAAAAAAGTGCTTTCAGAAATCAAGAAATAACCACTACCTCCTCC
ATCACATATTATACTTCACAGATGTCACTCACATCAATGAAAGTACCTTT
ATTAACATCAACTTTCAATTCTGAGTAACGAAGGGAACGGTTCAATATGA
GATGACCACAAAAAGAATACCATGACAGGATCATCCTTATCAACATTTCA
CACTCTACATCCCCTGACTTTTTGTATCAGCCActagattttttatttgt
taaaacaaGATTTTCTACTAAACGTAGCCAAACGAGGGTCTTAGGTAaca
caaagtttttcaaaaaagtaactTGAAACtagatataaaatttttttatc
aatttgtcTGTATTGTATTGGCTACACCAGTACTTTCATCTTGACCATTT
GTGATGATTAATAgcggtacac
Run BLAST on NCBI

transcript from alignment at sc0000314:103547..113320-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018990 ID=TCONS_00018990|Name=TCONS_00018990|organism=Clytia hemisphaerica|type=transcript|length=9774bp|location=Sequence derived from alignment at sc0000314:103547..113320- (Clytia hemisphaerica)
CAGCTAATAGCTACCGTAAATTTGTCAGTTTGGCAAAACCCTCAACGGTA
GGTCTTTTTAAGATCGAGACGTCTTCAGGTCTTTGTTTCTACTTTACAGT
GGATTAGACGTGGGCTTTCTGCCCTCTACCAAATGGAATACGTATTCGCT
TTTATATGTAATATCTTACTGTAGGTCGATAAAAAGTGGCACGATCTTCG
ACCATTCCATTCACGTGCACGAAAGCCATTCACAAACTTGCATAATATTA
AAACAACAGCATGAATTATCTTTAAGAATGACAATAACAAAATCTCTATT
ATCTACACATCATGTCAAATACCCTCATGAGGAGAGGAGAGATGAATGGA
ATAGAAGTTGCTCGCTCAGGTAAAAGACTTAATTAAGAGATATTCTAAGA
AAGTTCAGTCTGACAGGAAAAAAAAGGCAGAAGGGTTGTATTTTTCTGAG
AAATCTTTTCTTTTTACCAATACAATCTAATACAAAGAGTCCCCTCCTGC
CCAGTTGGCGACCGATCTAATTGGCGACCGAACGTCTTTAAACCCAGAAA
ACTCATACAAAAACAAACCTCTGGAGAATTTCTTTTGGTAGTTATATATG
CCTTGACCTATTTCCCATACTGTATACCAGGCGCCTGCGCTCGATAGGAT
CGATCATCGGAACGGCTCGATGACGGATCGATATATGATCGATGGATTAC
TTAACGATCCGAATAGGAGAGATCGTTTGGTTTTTTGTACAAACCTCTGT
ATAAACTATGGGCTAGCAACCAGTTGCTAAGATATTGGCTTGAAATTGAA
AATTAAACCACTGAAAACAAAAATAAAATTTTCCCGCACTCTGAATCCCA
TGACCTTGATATATGACAGTGAGGCTGGAACTTCGATTTTTGAGGATTAT
GATTTTATTTACCAGTTTTTTAGCGATTTTTGCCTCGCTAGCCCAAATCT
CGCAACCTCTTTACTAGAGTTTTTCAGCGTTCCGAAAAAAACGCATAGCA
GAAATGTTTTCATCTTCACAGGATCGTTTCTCAACAACAAAATACATCTT
TTAGTCTTTGGGTTTGTTTCTGACGTTTTTTCTTCAAAGAATATCGATCA
CTTTCCTTTTCCCCTTGAGCGCGCGAGAAAAAAATTATTAGCTTGTTTTC
GTGCGGGCAAATAAAGATGAGGCGGCAATCTTGCACTGAGGGTGCTACTT
AGTTTCCGCCCTATTTTGCGCCCACGATATAATGGTCCAAACACGGGGGT
AGTCCAAATGATAAACTATGTCGTTCTGTAAGTGTTTATTTTCTGAGAGA
TACAAATAGTATATTTGAATATTATTAACTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGAACTCCCATAGGAATTCCGATACCTAACCCGATTGGTTAATTTCGGAA
CGGCTTCAAGAAAGTCATAATGGCAGATAATTTTAAAAGTTTCTGAGGGA
ATGTGAGAATTTATCGATGTTGATGGCTTGTTGATTCTTTAAAGAAAAAA
GATAACAGGTATAGCTTTTTCTAATCCTGGAATATCTAGGTTCCAGCTAC
ACTGTATGAGTTTGAGTCTAAACTGATAGTGCACCTTACAGAAGCACTCT
TAATAGAAGAGACCGCATTCTCGTTTTAGTTCTAGTTGCAGATTTTTATT
TGAAAATCACATAAACTTAAAGAATATTTATGAAGAATGTGTTTATGTGT
CGACTAATGTAGTCACTATATTTGTTGAAATAGGAAATAGAACAGAGGTA
ACTCCAGCCTTGCCTTCAAATTGTTAGCTGTCAGGAGGTGTTGAAAGAAC
TGAAATCTTATTTACATCGAAATGAAAACACATAATTTAATGATAACTGT
TTGTAGAATGCACTATTTTGAGTTAAAGAAAAAGCAGCAAAAATTTTATG
CAATGGCTCCAAAAACATATGAAGAATTGGGCTTGCAAGTTCCTTATCTG
GTAATATCCATGTAGAAATTTTCTTCTGACACACCAAAGCTTTCAAGATC
AGGCAAATTGTCAACATTGTTTAGGTTACAGAATTCTGCCTTGTATCGTC
ACACAGTTTACAGTTGAATTCTGTAGTTGATCCTGACAGTTCATCAAAGG
GCGTCAAACATTGGAAAATTGGCCTCCAGGTTGATAAATTTTTATTTTTT
CATTTAGATGAGAATAAGCTCTTAACACTGTTTTTTTTCAAGCACCCAAA
TGCCCCGTTAGATGGTGGCATTAAACTCAATTTGAAAGAAAATTTATAAG
TTTATTATTCTCTTCTACAAGAAAAAAGTAAAAGATCAAATTTAACCATA
TAAAAAAGTCTCTCTTCCCCTTTTTAAAATGAATGGAACCCATAGTTAGA
GTTTAGAGTTTCATCATCTTCTCAATTAAAAAGAGCTATAATTTAGATAT
TTTCAGTAATTTAAATAACTTTGATCATTTATAAATACTAGGTATATATA
CATTCAACTTTTGCTGATTCAAAGTGCCAGTTGAGACAAAATTTGCTTAG
CTTTTGGGGGCTCAAGGCGCCCCCCCAGCCCCCAGTCTCTGTTACCCAGC
CTTCGGCTGGATAGTGCGGCTTACGCCTTTGTTAAAAACTCAATTTGAAA
GTATAAGCGGAGGCATTGCTTAGTGCTTGGAAAAACCCCTGCCTTATGTG
TTGTTAATACGCCCTAAAGCGTTGACAGTTAAGCTAGGCTAACTTAGCTC
TTTGCTCCTTCCAAATTCAAGAATACAATGCTTAAATTAGTTGACACATA
AAACATGTTATTCAAAAATATTCCCCATGCAACGTTTATATCGAAATCTG
CAAGACAATGAAATTGATCTTTTTTACTCAGTACTTCTGTAGAAGTTTTT
TTAAATTTCAACCAATTTGTGCTGCATTAATGATAAAGGGGGCCAACTGG
CCCAAATCTTTTGCGCTAATGGCTTTTCTGAGCCTTGGGTGGTAGGCTGA
GCCTTAGATGACAGGGTCCTGCTTTGGATGATAGGTGATCTTATAACTGT
CACCCTATTTTTAAGCATCATCTTTATTTGTTTCAATCGGTGATTCTAAG
GGTTGAATTTTTTTGTATCTTAAAAAGTTTTCAAACAAAAGTAGGAATTT
GATGGGAGAGTTACATTGTCAGCAAATCTGTTCTGATTGGATGAAAGTGC
TTAACCTTTATTTGATTGAGTGTTACTTTTTTTAGGGGGTAATGAGCTGA
TTGATATGTGCTGCCCAAATTTTGATATCTTTTAGCCCTATTAGCCCCAG
GGTGGAGTTCTTTTGTGTACATCTCAGAGGAAAATTTTGAAATGACTTGA
AACTTTCTGACTTTAATAAAATCCTATTGCAAGTCTTATTAAAGGGTAGC
CTTTTGTCTTTCAGAATCTTCAAACAGAATCTAAATATCTTTAGTGGTTT
GACTGTTGTAGACATTTTTGTAAACCATGTATTTTTCCTTTTTTCTGAGG
TTGACATTTTGTGATTTTTTTCTTCCTGGAAATTTGTGTCATGATGGAGA
ACATTTGTACCAAATTTCATGACCATAGCTGTTATGTATTATGGTTGATC
GACTGTTGTTTTGTCGTTTTTTACTACTTTATAGAGTTAACCAGCAATAA
ACTTTGTTTGATATCTTTTGATTGAATTATTATTTTTGAAAATTTTTTTG
ACAGTGATGATGATCTAAGATAGAAGAATCACTCCTATAAAAATGGTAAT
TATACCACATTTCTACAAGAAATTGATTTTTTTCTTCTTCATTTTTCATT
TTCATTTTCCATTTTTTTTCCAATTTTTTTACTTGATAATATTCTACTCA
TGAATATCTTTTTAACGAGCACAAAATCGTAACTTGATTCGAATTCTATC
AAAAGTTACAGCCATTTTTGTCTCCAGCTGCAAATTATTTTGAGACAGAC
TTTAGCTATCATGTTTGCTTACTCTTATCCTGAGGTATTAGCTTCTCCAT
GCTACAATCGTTCACTAAATATTTGAGACAAAGGGGAGTTCCCGGTGTAA
TTTTGAACACCACAATTGATTATTAAGTGCCTTAAACTACAGTTGGAAAG
TAGAGTTTTAACTCTTAGTTTTAACATGAGACTTAAGACTTAATGATCTT
AGGATTTAAAAGCTCAAATTTGCTCGAATGAAGTACACTAAAATCTCAAT
ATATTTCGAGGGACATTGTAGCACAAGAAGGGCACTCGCATGAGAAAAGC
TTTGTTTTTATGCTATAAAAATGGTGGCTATAAATAAAAACAATCACATT
TGAAAAATATAGCAAAAGATGATGTGATGGGAAACAAAAGAAACAAGAGA
ATCGGATGGGGAAACTGGGTGCTGGGGTAAAAAAAATGAATAATTTGAAA
ATTTTGAAATATTCAATTTGGAAAATATACACAGCCCAAAGAGCCTCAAT
CAAAACAGCTAGGTACCCCCAATTAATAGGTAGCCCCAAAGAATTGCAAA
ATATTAGCCCCAATTCCTAACCTGGCCTAGGTGCCCTTTAGATTTCTAGG
GGGCTGAAACCACGGTTCTGGGGATACAAAAATCAAGAAAGCTTGGGATT
AATAGGGTTAAGGAGCAAAAAGTTGAAATTTTCCTAATTCCCTGACCCTT
TGTTTTCCATACCCAGATGATTTCAAAAACATGACTTTATCACAGTCATA
TCATTTGAAGTATTTCAGATGATGATCTTACCAGTCGAACCAAATCAAAC
GCAATCAACCAATTGATATTTTATTGCGTTTGGTTGAGATTCTATTGCGT
AAATTTGGTCATGAAAGAATTTCTGGAATACAAATTCCTATGACGTCACT
TTGATCTGCATCATTTATACAAATCATTGTGTCATTTTGTTAAATAGACT
ATATGGCCCTCTCACTCGGATAATAATATGTAATTTTAAATTAACAAAAA
TTTGATTAAGAGTGAAACAGGAGACCAGACCTACATCACCTCCATTTTAG
CTATAATTCACAAATTTTCAACCAAATTCCATTTATCAAAAACATTTGAA
TTTTGTTGTTATTAGAAGTTACTATTTTTGCTGTGTCTACTGCCAATCGT
ATCTAGACTAATTTCACCTGCCTTCACCTCATTGTTTTCAAAGATTTAGT
CTCCTGGTATCACACATTATTGTCGAAACACACAGTAGAAAATTGTCTCT
TGGAATTATTACTATACACTCAAAACTAAATACTAGTTTTCAGCTATAAC
TGAGGAGACTGTTATTCGATTTTGATTTGGTCAATAATTCAGACAGTTCT
CATCAAATATTGTATTTCCAACTGTTACGCAATATTTTTCTCTTGTTATT
TTAGTAGCCACAGAGTACATAAAAAGATTATAAGAAACAAACACTAATTT
TCTGGTTTGTTGTTTTAGGTTGCATTTAGTGGAGTGTCTTATTTTTATCA
CAACACTTTTGCACGTGATTGTTTCTTCTTTCATAACTTTTACAATGTCT
CATCATTTTATGTAACAAGTTTCACATGAATTATTAAATTATTTGTTTAT
TCTGTGTTAAAACAGCTGAAAACAGGGGTGTATTCAGTCAAGTAGAGAGT
TTAGGTAAATTTATTATTCATGAATATTTTATGAGCACTAGATAGTCCAT
GTAAATATTCAAATCTAAATTTATTGAAAAACNACTAGATAGTCCATGTA
AATATTCAAATCTAGATTTATTGAAAAACTTGAATTAGGAAAAGTTTTCA
CCTCTATCATTGCATAACATTGTTAATTTCATAAACATATTTTTCAGGAT
TGTCAAAGGTGTAGGGTAGAAATCTTCGATAGAACCTGATATAAGACCTA
ACAAAAAATTTCATTGGACATTGCTTTCAGTATTTTATCAAAGTTGTTAC
TCTTTTGCCTCTTTTTCGTTTTTATGATAAGCTTTTTAAGATTTCAACTC
ACCACTCCCCTATTTTTATCTTACTTTATTTTTATTGAACCTTTCTCTTA
GTTTTAATCAGACTTTCTTCTGTTTTGTTCTTCTCACTTTAACGGAATCA
TTTATTCTACTCTACCTTGTCTTTTCGTCCCTCACTTTACATAGAGGCCT
ACAACGGAGAAAGCTGTTTGAGTTTTATTTTAAAGGACAAGCAAAAAGTG
TATTATGATCATAACTTGTGACTTTAACATTTTTTCTTGGTTGATTGTTG
CTGGTGTATACTTCAATGGTATTATCAAGAATGGCTTTCCTTTACAGGGT
AGTTTAATTATAATATGTAAGAAAATTATTTTTCAGCACAAAATATTACA
ATGAATTTCCCAATCGCCCCAATAGTTTTCTCCTCATGTGGATCATTTCT
TGGCCTTGCTTACTTATTAAAAAAGAAGTCATTTCCAAAGTACTTGAAGG
ATCCTGGTAGAAGGAACGCATGGTTGTGGCGAAACACATTTTGCTCTTTG
ATTCACTCGTGTGCATCTGCTGTGTGGACCTTTTTCTGGTAAGAAAAGAA
TGTCTTTTATGAAGTATCACCACTCTAGATTTTGCCTTTTTCTTTGGTGA
ATCATCACACAGTTTACACCATGACAAATAGCTACAAAGGGTAGGAGGGA
AAGTATTNCATTCTCTTTGGTGAATCATCACACAGTTTACACCATAACAA
ATAGCTACAAAGGGTAGAAGGGAAAGTATGATTATACTATTAATTTTCTT
TTGAATTTTGTAGTTATTATGATGAGCCAAAACTATTGGGCGATATGGTG
AACACAACAACGAACCTCTCAATACAACTTTTGTCCTTTTCAACAGGTAA
AATTCAGTCAGACTAAATAATCACTTTCAGAAAGTAAGTTTCCAAATCAT
GGCAAATTATACAGTACTAGCCGGTACCCGGCGTCGCACGCCGGTTAAGC
TGTAGCTGAACGCACTAAAAGTCCTTTGGATGTTGAAGCTGGCTTAAAAA
AGCGATCGAAAAAAAAGAAGAAATCTCTACAACGTTTAACTCTAACCTTC
CCCGGGTGTCTTATCTTTTAACCATATTTGGATCGTGTACTGTCCCCCCC
CCCCGTGACATTTAATTTTTTGTTTAAGTCAAAAGTTATAAAAAAGCATC
GTTTACTGTACCAGTGTCGTTTGAAATGACTCTGCAGGTAGTTATTTTTC
TCGCTTCACTCGCGTTAAATATGCCGTCCAGTTTAAATGACAATTTTTCA
GGAAAAAGTGGGAAGGTCACAAAGAATAGTGCAACTCTTTGTTTTTTATC
AGATCGAGAAAAAAATAAGACAATTTAAAGTTGCTTTTTTAATCCCTTGG
CATAATTTTTCGAATTTAAACATAAGAATGACAAACTAAACGACGACTTG
AATATTTTTATAAGAAGAAAGAAGTGAACTAATTTTTTCTTATGCTTGAT
ATCGTCCTTTGAATGCTGTTGTTGTCCACAAACTTTTTGATTTTTATGTT
TTGATTTACTTTTGAAATATTCTTTTCTATGAAATGAAATTGTTTTGTTT
TGAAAAGAATTTGAATGTCATTTATAAATACGATCGTTAAATACATTCGA
AAACATTTAAAACAAAAGAATAGAGAAAAAGACAACTCTGTGCAAAAATT
GAAATTACTAAAATGTAGATGGGCCTTAAATTTCAAAACAAAGGCTGAAT
AAAGTCCAAACCAAGCTCTATCCGATCTTTTGCAAATGGCGCGAATCCAA
TGGAACAAATTTGTGGAGCAAGAGACTAAAAGTCATAATTTTAAAACACA
AACAAAGCGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTT
TTGCGAATGGCGCGAATCCAATAGAACAAATTTGTGGAGCAAGAGACTAA
AAGTCATAATTTTAAAACACAAACAAAGCGAAAGCGAAAACGAAAGTGAC
ACACAGACACACAAAGCACCGCTATTAATATATAGATTAAAAGTTCTTCC
CTCTCAGACGAAGGATTTCCTTCTAAGTGAAGTATATGAAGAGGCTTTTA
CGTCTCAAAATTTTGCATCGGAAGTTTAAGAAGGCTAATTTGCTGTGTTG
TTGGATTTAATTAGTACTTGTAACTATTTTTTATTACCAACATTAAATAA
AGAACAAATAAAATAATAAATGTGTAAAATCCATTTTCCGTCTCAAACGA
AAAGCCCTGCTTTAACCACTGATTATACCCAAAGTCGTACTAAAAACATT
TCCATTGATAGTAACACGTCCAATCATTACTATCAAAAAGTCTATTAATA
TTTTTCTTGCATTTTTATAGGTTATTTCATGTATGATTTTCTGGATGTTG
TTCTGAATGATGGCTTTCGACAAGTCTTTATCCTTACTCATCACACAGCT
GTAAGTTGATGTCGATGATCCTTCTATTGTACTGTAGATGTTTTTTTTTG
CTTGAAAGCTCTGTTTACTCCACTTGGACACTTGTGTTTTTTCAGTGTTG
CAACTAAACGGTCCAGTTAAGATAAAACATACTATTTCCTTTTTCGTCTT
GCCAATAAGAGCGTTTTTGGGTCAACAGGACTCACAAACCAAAGATTAAT
TATATTCATGATATGCACCACTGGAGAGTCTTCTTAGAACTTTTAAAATT
TTCCATCCAATACGTTACTTAAACAATAGAAAAAGTGACGTACGTATTGG
GATGAACAAAAATAGAAAAGTTGCATAGTTTCACGAAGTCATTGCAGTGG
TGCATATCATGAATACCTAGTTGCAATTCTGATCTTTCATGTTTTACTTT
TAGAACGAACTCCTGCTGAAGTTTATTTACTTCATCTTTTCAACTCTTAT
TATTCAGGTAATCACTGCATTCTCGTTGGCACTCACTAATGAACGTTACA
TGGGTTTTGGTGTGTGTGCTTTGATCATGGAATTCAACAGCATCTTCTTA
CACATCAGACGTTTGATGAAACTTGTCAATCATTCATCTGGTTGGAAAAG
CATCAATGGGGTTTTCTTATTGCTAACAATGCTCTTTTGTCGTATCTGCT
TATCCTGTTGGATGGTGAGATGGCTTTTGCAGAATAGAGACTTATTACAA
TACAGCCATTATGTTGTTGGGCTGGTTGGCATGGTGATTATGACAGTCAC
CAATGTGGGTCTCATGTACCGTCTTTGGATGTCTGATTTCCATAAGAAAT
CAATCAACAAAAAAGTGCTTTCAGAAATCAAGAAATAACCACTACCTCCT
CCATCACATATTATACTTCACAGATGTCACTCACATCAATGAAAGTACCT
TTATTAACATCAACTTTCAATTCTGAGTAACGAAGGGAACGGTTCAATAT
GAGATGACCACAAAAAGAATACCATGACAGGATCATCCTTATCAACATTT
CACACTCTACATCCCCTGACTTTTTGTATCAGCCACTAGATTTTTTATTT
GTTAAAACAAGATTTTCTACTAAACGTAGCCAAACGAGGGTCTTAGGTAA
CACAAAGTTTTTCAAAAAAGTAACTTGAAACTAGATATAAAATTTTTTTA
TCAATTTGTCTGTATTGTATTGGCTACACCAGTACTTTCATCTTGACCAT
TTGTGATGATTAATAGCGGTACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010645XLOC_010645Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018990-exon-sc0000314-1575043694:113274..113320TCONS_00018990-exon-sc0000314-1575043694:113274..113320Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1575043694:112952..113044TCONS_00018990-exon-sc0000314-1575043694:112952..113044Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1575043694:106633..106834TCONS_00018990-exon-sc0000314-1575043694:106633..106834Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1575043694:106325..106407TCONS_00018990-exon-sc0000314-1575043694:106325..106407Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1575043694:104771..104850TCONS_00018990-exon-sc0000314-1575043694:104771..104850Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1575043694:103547..104313TCONS_00018990-exon-sc0000314-1575043694:103547..104313Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1510915933:113274..113320TCONS_00018990-exon-sc0000314-1510915933:113274..113320Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1510915933:112952..113044TCONS_00018990-exon-sc0000314-1510915933:112952..113044Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1510915933:106633..106834TCONS_00018990-exon-sc0000314-1510915933:106633..106834Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1510915933:106325..106407TCONS_00018990-exon-sc0000314-1510915933:106325..106407Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1510915933:104771..104850TCONS_00018990-exon-sc0000314-1510915933:104771..104850Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1510915933:103547..104313TCONS_00018990-exon-sc0000314-1510915933:103547..104313Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1491911889:113274..113320TCONS_00018990-exon-sc0000314-1491911889:113274..113320Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1491911889:112952..113044TCONS_00018990-exon-sc0000314-1491911889:112952..113044Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1491911889:106633..106834TCONS_00018990-exon-sc0000314-1491911889:106633..106834Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1491911889:106325..106407TCONS_00018990-exon-sc0000314-1491911889:106325..106407Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1491911889:104771..104850TCONS_00018990-exon-sc0000314-1491911889:104771..104850Clytia hemisphaericaexon
TCONS_00018990-exon-sc0000314-1491911889:103547..104313TCONS_00018990-exon-sc0000314-1491911889:103547..104313Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000314supercontigsc0000314:103547..113320 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.3868	14.2829	155.258	173.967	0.237257	1.63982e-05	3.35316	0	9.9075	7.3068	15.1822	7.72978	13.9973	15.2765	13.5426	23.074	29.8475	34.4213	8.6489	10.5083	21.733	24.8916	27.3914	29.1971	0	5.67734	3.79236	7.16693	33.7584	24.1046
Blast
[Close]
BLAST of TCONS_00018990 vs. Swiss-Prot (Human)
Match: TLCD1 (Calfacilitin OS=Homo sapiens GN=TLCD1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.441e-16
Identity = 64/226 (28.32%), Postives = 110/226 (48.67%), Query Frame = 2 
Query:  197 SFLGLAYLLKKKSFPKYLK-DPGRRNAWLWRNTFCSLIHSCASAVWTFFCYYDEPKLLGDMVNTTTNLSIQLL-SFSTGYFMYDFLDVVLNDGFRQVF-ILTHHTAVITAFSLALTNERYMGFGVCALIMEFNSIFLHIRRLMKLVNHSSGWKSINGVFLLLTMLFC-RICLSCWMVRWLLQNRDLLQYSHYVVGLVGMVIMTVTNVGLMYRLWMSDFHKKSINKK 862
            +F  L   L +   P +++ DP R   W W N   S  HS  S +W   C +  P +L + + T  +LS  LL  FS GYF++D +D+V +   R  +  L HH   + AF   +    ++G GV  L++E ++IFL IR +MK+ N           ++ L M F  R+    ++  + L+  +      +++G+  ++++ V  +    RL  SDF  + + KK
Sbjct:   18 TFRALRRALCRLPLPVHVRADPLR--TWRWHNLLVSFAHSIVSGIWALLCVWQTPDMLVE-IETAWSLSGYLLVCFSAGYFIHDTVDIVASGQTRASWEYLVHHVMAMGAFFSGIFWSSFVGGGVLTLLVEVSNIFLTIRMMMKISNAQDHLLYRVNKYVNLVMYFLFRLAPQAYLTHFFLRYVNQRTLGTFLLGI--LLMLDVMIIIYFSRLLRSDFCPEHVPKK 238
The following BLAST results are available for this feature:
BLAST of TCONS_00018990 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLCD11.441e-1628.32Calfacilitin OS=Homo sapiens GN=TLCD1 PE=2 SV=1[more]
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