TCONS_00018812 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018812
Unique NameTCONS_00018812
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3050

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018812 ID=TCONS_00018812|Name=TCONS_00018812|organism=Clytia hemisphaerica|type=transcript|length=3050bp
AGGTCAGTCACGCCCGACTGATCACAAACTGGAGAAGACAAACAAGCTGG
CGGATTCATGCATGATCAGTAGACcataagatttttaaaaaatggaaatt
ttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGATAAACATGT
AGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCTTGATATCA
GCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAACCCAAAACA
ATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAAAAGTCAGG
TCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACGGAAGACCTT
TACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCATCAAGGAGTT
CGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGGTTGTGTAAG
TAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGACCTGGAGTTA
TTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTTCAAAAGATA
TCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGAAATTCGAGA
AAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTCCCAGTGTAA
GCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGTAGTCTTTCC
AAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGAAATCATCAA
AGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTGCAATCCCGA
TTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAATAAGTTACCA
CACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGTTCAACAACC
AAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAGCACACCAAG
TTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAATGGAATGGCA
ATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGCTGACACACC
TAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAACGGAGGACA
ATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCTTCTCTCGAA
GCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCCGTCTTCACT
TGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCAATACAACCA
GCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATCTCAGCCTCC
AATAAAATCTTGATGAAGACAACACTGAACATCAACACAGACTCTCAAGA
AGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCACTAAATACA
TCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAAGCAAGACAT
CCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCAAACATCCCC
GGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTCGACGTTTAA
GGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTGGCCTTCAAG
AAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGCCACCAAAAA
TCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATAAAAGAGCCA
AGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCATCTAAGAGA
AGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATATCATCCACA
CATGACACCAACATACGTTCCTTTATCACAACAACATTCACAAATCTTTC
ATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAATCGCTCTC
ATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCGAAGGAATC
TGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGTAGCAACAG
CCAATGAACATTCCCCTAAAAATATAACATACATTACTGCACCTACATTG
AATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCACCACCGCAC
ACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTGAACAGACTA
ATCTTGACACGACTGACGACTCACCATTGACAATAACAAATGCTAACTTA
CATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATCCAAACATGT
TCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTCACCATCCAT
CACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaaaattcggCT
GCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTTGACACCGTC
ACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGATGATGATTTT
CTGGGAAACTTTGCTGTGCAAATATACCAATGCGGTGAAATCACCATCAT
TGTGACAATTAACGATTACTAACAACACAAATTAACTACTTTACAATAAC
ATCATTTACATTTACATCTACTTGCTTGTTGGAATCTTTAAGAGTAGTAG
GAGGTAACAGGGCACTTTTTAAAGTTCTGAAATGAGTCCACTCAGCAGGT
TGTCAATGACGTGTCTAAGGATATTTTTGGCATAATAGGCTTTAGATATT
AGATATTCGATTATATTTAgagattttgggaatttttaCGGGTGTGACGT
GACGACTGACGACTTTTCGTTATCGTCCCCTGAAATTAGTAGATTTCATG
TTCAATGTCCTTTTCATCATACGCAGAGTACAGAAtagaatattttttat
taatttttctagttttttttttggaattgtaAAAAATTATCTATATGGat
gttaaaatttcttttagagtcgagtttttatatataaatagtataatttc
gttatttttggtATGGACTTTTTATCCATAATTTTTTGGAGCaaattttg
ggaatatttaaAATGGAATTAATCAATGaatttattctttcaattttctt
Run BLAST on NCBI

protein sequence of TCONS_00018812-protein

>TCONS_00018812-protein ID=TCONS_00018812-protein|Name=TCONS_00018812-protein|organism=Clytia hemisphaerica|type=polypeptide|length=782bp
MEIFKHHRSLFEIESVDKHVVSTNSEAISSSTDLDISQTLQDEAAALQSE
PKTITKNEDGNTQSCSQKSGHGGVNQLGGAFVNGRPLPERIRKKIVDLAH
QGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPSVV
QKISEYKLNNPSMFAWEIREKLLSDLICDNETVPSVSSINRIVRNRLASG
SLSKEPTEEEIDTSTNEIIKEEEPTNENPVFQGAIPIPIGALPANLNSLN
KLPHTPYSVNGILGIAVQQPNGTVIMCPPEYFAAHQVQGATDLSPTEHTN
GMAIQVVNEAEDSHTMADTPNLAAAQYLIPIGSTEDNQNLVQINYPPSLP
SLEAETVEKEHPLPQPPSSLVEDVSIPPTKLHINTTSIENKLKENIDNSI
SASNKILMKTTLNINTDSQEEEPLRVHQSPSPTTKYIYTNPSHQEEENYE
ARHPLQIQPAFFPNSPQTSPVSKHFLEHDRKPGRRLRTSFSTEQKQALEV
AFKKTPYPDAIQREQLATKNQIPEARVQVWFSNKRAKHRRLDKNFDLLKP
SKRRNSKSIESPLSPPYHPHMTPTYVPLSQQHSQIFHPSLIPIIPAAGQQ
IALISPSHLYNSVPPSSKESVEEHSKKTNEPTPVATANEHSPKNITYITA
PTLNSEQPTMIPIGAVHHRTHTEEAMEEMPQRPEQTNLDTTDDSPLTITN
ANLHSNNLTNNTETEESKHVLPSMKVLTRYNDRHHPSLSHSFIPPEQWLK
NSAAIALGGRASWTSPLTPSPPPLHVVSSSGQ
Run BLAST on NCBI

transcript from alignment at sc0000309:152317..163277+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018812 ID=TCONS_00018812|Name=TCONS_00018812|organism=Clytia hemisphaerica|type=transcript|length=10961bp|location=Sequence derived from alignment at sc0000309:152317..163277+ (Clytia hemisphaerica)
AGGTCAGTCACGCCCGACTGATCACAAACTGGAGAAGACAAACAAGCTGG CGGATTCATGCATGATCAGTAGACcataagatttttaaaaaatggaaatt ttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGATAAACATGT AGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGNAGTGTTGATAA ACATGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCTTG ATATCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAACCC AAAACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAAAA GTCAGGTATAAACTTTTCAGTCATGTTTAACTTATCATACTAAAAACCTT GCTGTATATCTtactgtgagatcgggtaacttgcatcagtggaggctaac atgcatagccctcaaatgaaggACTCGTCTGGTcatttaaaaatacaaag ttaaatcaaaacaaaaatcgtaGAGTaaagctgcgagcggagctgaatat agtttattttaatgaccagccaggtcactcattttagggctatgcatgtt agcgtccactgatgcaagttacccactctcacggtagTATACTAAAGACA TAATATTGTTATGATGGGGTACCCAGTGTGTCAGCGTGAgtccaggcgta gttaatcgatataatcgataatcttgagtaatcgataaataatcgataag taatcgaatGGATtagacagtcaggcacatcctggcaaatgaacgggtat ttttcacttgcgaccattggcaaatgaacggggtcgaaaacgaaagtgac gtaatagcgccgaatacccagtttaattgaaccgggttggaaatatNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGTAGGCCCTATG CTACCAggggattggattcaattcaaaagtacatcccaattgagatcagc gaaaaatgttgcttttaatttcgcgaaaatggcgaaaatttgagaaatcg agaaatttaatctcgcgaaaatggcgaaagttaatccaattaaagtacca ctccctaaaatctgaGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCAC GAATCGATAGTTGATCGATTAACTATTTGATCgatgattaatcaattttt gatcgatatgtaatcgatcaaaagctgtgatcgatagccGATCAATTTTA Aatcgatacttaatttaattgaagtataatcgatctataatcgataaaca atcgatgacaaaattgatcgataaataatcaagctttgaaaaaatcttaa gTATCGATTACCTTTCGATtttatcggttaatcgatatctaatccggatc gattacttatcgattatttatcgattactcaaaattatcgattatatcga ttaactacgcctggctTAGTTTATAAAGATTCCTGTTTATTTATATCGAC AGTTTATTTTGCTGGGATTTCTTTTTGCTAATagtccagacggtactaat cgaacgttcgattgtgatcgaagtaatcaataatgatcaaTAATAATTGA AGGTGATCAGTGACCacttatcgattctatcggtgatcgaatactcactc AACTCCAAATCATGGCATTTTCTTCgaccattttgatttgttcgaTCGTT TTGATTACTGTTCAATTACTTTCAATCACTTTCAATCATATTGAATACTT CCGATCATATTGTGTCGGATATGTTTCCTGTAGCAAAGCGATGGAATCTG AAACCGAGTTTATCTTGtccaataaattttgagactgaGTTTATTTCCTC CAATAAAAAAACACGCAATTTACACGCGAAAACCACTTTTGCTTTCTCTG ACCAATCAAAATGCGCGATATGGGTTAtttgaggaaacccagggcaAGCA CACTCAAAAATGGCAGGGAAGTACTGAACAGTTACATCATTATgccaaaa cattttgttcaaccaccttcacttcaagataggccaccatataATGAACT Tctttttataggatgaaccatattcatatggctttcagccttgcactcca tcgcaaaggctttcaattttaatgacttttttgactaatgacaagttaaa aattttcaattttttNtatgtgtttcattgtttcaatgtttattgattag ttttgataaccaggtaggtccataaaagtatcacttgttatatttaagta ttaaaaaggcatgcattcaaattataaaggtttaaattttttctctgggc tatttattaaaatatatcaaataggctctgtgatggagtgtaCACATGAA TATGGTACATCCCttaaaggaagttcattctgtGATGGCCTCTCTTAGAG TGAGGATGgctgaacaaaatgttttggtcatatcagggggggggcacgca gttactacaagacagtatgacacttactaccgtggtggtactgtattcag aaattatgaaaacagttactacacaatGTAGTAACTGctttttgggggtg gtgccaaacactaaaactagtacttttggtgtagtaagtgcttatattta attctttttaaagaactttcaaaaattttcacaaaaaatgaatttttttg tgaaaaaattctttgttaaaaaaaatattttaaaataaatggacgaaaaa aaatttgaaatttttctcagatccaactttgaaattatgctttccctaat tatcattgaAATgctctcaacagctgttaaccaagcaaattaaaagaaaa tctagcacaaaaatggctttaggttgaaaaataatcgtaatttagggtaa tttcgagcatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcaaaaacagggg tggtacctggtaatcttttctgaaaacagttactaccaaggtgtagtaac tgcaaagggtggtggtcctgaaaaaaaagtgttgaaaaagcacttactac acatcatgtcttgtagtaactgcgtgcccccctgGGTCATATTGATGTAT ATAACTGCTGAAGGTGATTCTTATGGCTTCTTTTTGTGGTTTGGTTTTag gtcaatgtttttggtttttccaaGGTATCTAGATGTAATCAATCAACTgg ttatcgaagtaatcaattggttatcgaaagtaatcaataacaatcaaagt actcaaaCGATTACCGAGTCTtcgaagggttgttaagaaagtgatcgaag actcatcacaatttttttgaaattttgatacttGAAATTTGATTATTAAT CGATAAATGGTTGTTCGATTACTTCGNtcacaatttttttgaaattttga tacttgaaatttgattgttaaTCGACAAATGGTTGTTTGATTACTTCAAT CATAATAATCGAATGtatcgattagtaccgtctggaatAGTCACTATCGA AGGGAGTACAAAACACTTATTTGATTTATTCTCTTTGATTTAGTGGCTTA CTGGTCATGTGGCTTACCCTACCTAGAAATTTTGAAGGCTGAGTTCTCAA TAATAGAAACAGTCAGAAATATACTTTCTTTTCAGCATTGCCAGCAAAGG GCTAATTTTTCATTAGATGCACTGATTTGTGGCTTAGAGTTTGTTAAGTG GGCAAAAATGTGGCTTACACAAGGGAAATATAGGTGAAAAGGTGAATTTA GGTGAATATGTAGGTGAAATATCTGGAAATAAAGGTGAAATTTTATGTCT CAtattttcagtgttttttcCAAGCACCCAAATGCCCCCGTTAGACGGTG GCattaaactcaattcaaattgagttcattgataaattctataattttaa ccgttttaaagtGCTAGTTAATGGTTAAGACAAAAATAGGCTCAGCTTTC TGTGAACCCCCCACCAGGGCTAGCCCTGGACCCACCGGGGGCTcgagggc cccccccccccgggggggggggcccccccccccgggggggggggcccccc cccccgggggggggggcccccccccccgggggggggggggggcgtggCCC CCCCCGTGGGTCCAGGGCTAGCCCTGGACCCACAGGGGGCTCAAGGCGCC CCCAGCCTCTGATATCGCGGCTTACGCCTTTgttaaaaactcaatttgaa agtaCAAACGGAGGCATTGCTTGGTGCTTCATTAAAGTATAACACCAGTA Ggtgtaaaaaattacaaaaaatttgttgtaaaagtacaattttgtggctt acaaagtcacattaaaaattatcgaaaagtaagccacaaaaaaactacat tttaaaacagctagaaagtatgtacatttaacatctttttaaaaattcaa cctttcctctGTCAAATTAAGAAAGTCCCATTCTAAGATGGCTTATCTAA TTTGTGTGGCTTACATTACTAAAAAAGATACGAATTTTGAGTTGAAGCCA CATTTTTAGCCcaattaacaaagaaaaaaactttattcaTAATGTCTTAG TATTTCCCACAacattgtaaaatttcaagacTTATCGATTAAGACTTCAT CAGCTAtgacaaaaagttgtttttgggcatttttcaaaatgtcacactat ttttgattggGATCAGCTATAGAAGACTTACGTCGCATTAGATTCCCAAA CTTCTCAAAGGGATTTGAGCCAAGGCCCTCAGTTAGAGATTGTGTTATGC TTTTCTAGATCTCTAGACACAGGTGTCTTAGTCGAGCAAGATAATTCCTA TGTGGAAAAGGTTAATTTTCAAATCTTGTATTTTGCTAACATaacattaa aaaaacaattgCACAGGAGTAGCCCTCTTCTCTTACTCTTACCTTAATAA GGTAATTAACTTTGGCTAGAACTAATTTTGGTCTGgagcaaaaatcataa aattcatGAATTGAGGAACTTACTTTGGGAAGGGagaatttaactttttt gcccaaaaatgaGTGTTTTCATCGTTTTATCTCTAGGTCATGGAGGTGTC AATCAACTTGGTGGTGCCTTTGTCAACGGAAGACCTTTACCAGAGCGCAT TCGGAAGAAGATAGTGGACCTTGCTCATCAAGGAGTTCGCCCTTGTGATA TATCGAGACAATTACGCGTTTCTCATGGTTGTGTAAGTAAAATACTCGGA CGTTATTACGAGACAGGTTCTATAAGACCTGGAGTTATTGGAGGAAGTAA ACCCAAAGTTGCCACACCCTCAGTCGTTCAAAAGATATCAGAATATAAAC TGAATAACCCTTCAATGTTTGCATGGGAAATTCGAGAAAAGTTATTGAGT GACCTGATATGTGACAATGAAACTGTTCCCAGTGTAAGCTCTATAAACCG TATAGTTCGAAACAGGCTTGCTTCAGGTAGTCTTTCCAAAGAACCAACAG AAGAGGAGATAGACACATCAACCAACGAAATCATCAAAGAAGAAGAACCC ACTAATGAGAATCCTGTTTTTCAAGGTGCAATCCCGATTCCTATCGGAGC TTTACCGGCAAATCTGAACTCGTTGAATAAGTTACCACACACACCATACT CCGTGAATGGGATCCTCGGGATAGCTGTTCAACAACCAAACGGAACTGTC ATTATGTGTCCACCTGAATATTTTGCAGCACACCAAGTTCAAGGGGCCAC TGACTTGTCACCCACTGAACATACCAATGGAATGGCAATCCAAGTGGTGA ACGAAGCTGAAGATTCTCACACTATGGCTGACACACCTAATTTAGCTGCT GCACAATGTGattttttagtttaatttttcgattttttctctTTCGAACC ccttgaaaactatcaaaagGCAGCCTACCTAGATTACTATTGGAGAGCTC CATGGAAGTGTCAACCTCTACGGAATCTGTCTTtctttcattacttttga tagaaacatccatttaaaattaaatttggtgaCAAGTTTAGCACTTTATT CTGCCAAATGccaaatatttttcttgatgttcaaaaatattaaatatgaa aaaatggTAAAAGACAAAACTGACGGATTTACCCAACAATATTGTGAGGG CATTGCTGTTAAAAATGGTTGTCTTTTGGTCATGAAGTTTAAAAATCGCA CGTAAGGCcataattttggaaattataATGAACATGACATATCGACTCTT TATCTGTTGATCTTAAAGTAGACTGATTTTCTGTCAAATTCTTACATCAT GATAGGAATTGTTCAAGAATAACTTCAGGGTTGTGTAAAACTTCTTGATT TTATCAGCcttaatcttcaaaattttcagacttaATACCGATCGGGTCAA CGGAGGACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCT TCTCTCGAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCC GTCTTCACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCA ATACAACCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATC TCAGCCTCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGA CTCTCAAGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCA CTAAATACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAA GCAAGACATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCA AACATCCCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTC GACGTTTAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTG GCCTTCAAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGC CACCAAAAATCAAATTCCGGAAGCCAGAGTACAGGTTGGTTAGGTTTTGT GTTTTTTAAGTGGAGTATCTCAATAAATAtagaaatagttttgaaaatac GTTGAATGATTCGATCTTCTAATCAAAAGGATTGTAATCGAATGAAATTC CAAGCCTTTCAAACAAACAATCTTTCCTTAATCCTACAATAGAATAACAA ATAAAATTATCTTCGTTTTTAAGGTTTGGTTTTCGAATAAAAGAGCCAAG CATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCATCTAAGAGAAG AAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATATCATCCACACA TGACACCAACATACGTTCCTTTATCACAACAACATTCACAAATCTTTCAT CCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAATCGCTCTCAT TTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCGAAGGAATCTG TTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGTAGCAACAGCC AATGAACATTCCCCTAAAAATATAACATACATTACTGCACCTACATTGAA TTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCACCACCGCACAC ACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGTAAGCCACCACACAAC CAACAGTTGGTATATTACGTCATCCAACCTGCACTCACTGAGAATCCGCC TCTTTACGGATCTCCTTACCATCGTCTCTGTCCTCCTTCTCCTTCCAACG AATATGAACATGAAAGTCGAACGTTCAAAGATGAGGAGGTTTCTGATGTT GTCCAAATAAGAGAACAAAAAACTTCTTATACTTCTCTTAGAGATCTCGT TGGCACTTAGATATATCACTAACATTGGTGCTTTTTCAATGAATCAGCTA AATTTCATAGAAGTCTAACGTCAGTCTATTCTGAGAGAAATTTCTTAGAT TGAAAGTCTTAAATGTTCTTAGATTTTGGGCTTTTTGTTCGTCTTAGACT TTAGTGGGAAATAATTTTATGTCATAgtgtaaaaatgtttttctgtttAG TTAGCCAGTTTGAAAGTCATTCGAAGTAACATTTTGTTGGTTTTCTGCTC CTCAGGACCTGAACAGACTAATCTTGACACGACTGACGACTCACCATTGA CAATAACAAATGCTAACTTACATTCTAACAACCTCACTAACAACACTGAA ACTGAAGAATCCAAACATGTTCTTCCTTCCATGAAAGTTTTGACAAGATA CAACGATCGTCACCATCCATCACTTTCTCATTCTTTCATCCCACCCGAAc aatggttgaaaaattcggCTGCTATCGCTCTTGGCGGTCGAGCTTCATGG TAAGTAAACACCTTTTTACGAGCGATTCTTGCTTGCATTGAAGTATTCAA ACATTTAGAAAAGAAATGAGATCGTACACAATACTTTACAGAAACTAATT CGGGAGGTTAGTTTTAACAACCAGCAAAAGTCCTACTTTAATCGGGTTAA ATattgcgagattaaatttcgcgatcgaaaaaaatcgcaaaattttctgg GTTTAATTTCACAggtcagagttttgaaaaatttcgcgtggatttaattt cgcgaataagcctgaaaacagATGAAAAATGTTTCGCTTCAAATGGAGAC TTTGAACTGGTTTCTCCGCCAAAATtgcgattttaaaaattttgcagtaa aaaaaaattcgcgacatcgcgaaatttaatctcgcgaaagttaatccgat taaagtagaaaatttgacgAGTGATTTTGCCTTTGATGAATATTTGGCTA AATTCCCcaaaatcattaaaatcaaaTCACTTAATAATAAACAACCTCTG TCTGAAGGTGGGAGGGAAATATATGTTTGCGTCGTTTCTAAACCAGAAAA GCGCAAAAGCCTTGAGATATCTAACGTTTcgaaggtttttgttttttggg gGTGTCAAGAAAGGGGAACAGACGTCTTTCTGCATTTCGAACTTATTGCT TGTACGATCAGAAACATCAGGTGATATGCGATAAATTGATtggagtttta ttttatttttttcaggacaTCTCCCTTGACACCGTCACCTCCTCCGTTAC ATGTTGTCTCATCTTCTGGACAATGATGATGATTTTCTGGGAAACTTTGC TGTGCAAATATACCAATGCGGTGAAATCACCATCATTGTGACAATTAACG ATTACTAACAACACAAATTAACTACTTTACAATAACATCATTTACATTTA CATCTACTTGCTTGTTGGAATCTTTAAGAGTAGTAGGAGGTAACAGGGCA CTTTTTAAAGTTCTGAAATGAGTCCACTCAGCAGGTTGTCAATGACGTGT CTAAGGATATTTTTGGCATAATAGGCTTTAGATATTAGATATTCGATTAT ATTTAgagattttgggaatttttaCGATTGTGATCGTGACGagagtaaaa taatttttgtaggCCCTGTTGGTACTTGTTCCCAAAGTGTACACAAGCAT TTATTATCCGGCTTGGTATTCTGCCTGAAAaggtacaaaaagaaagagct agagggctttttagaaataagatcataaatcttttttgaaaatcagagat cCTCGAGCCTCCATAATAGTTAACTCCTTTGCGAACAAAGCTAGAGCatt atttgttttttgaaaCAATGGAGGAGGGACAATTTTTTCTCTCCACCGGT CACTTTAGTCGGTTATctagtgtctataataattccttggTGTATTTTTA GGAATATTTTGGTTCGTTTGTCTTTTGGGACTGGTGGACGGGTTCTTCAC CAAAGTTAAGTGCTGAGCGCTGATTATCTTCAAAAGTATATTCAGCATTC CACATTTCAACTCTTGTATTATTAAACCTATGAACTTCTACAAAACCAAA CGGTGTGACGTGACGACTGACGACTTTTCGTTATCGTCCCCTGAAATTAG TAGATTTCATGTTCAATGTCCTTTTCATCATACGCAGAGTACAGAAtaga atattttttattaatttttctagttttttttttggaattgtaAAAAATTA TCTATATGGatgttaaaatttcttttagagtcgagtttttatatataaat agtataatttcgttatttttggtATGGACTTTTTATCCATAATTTTTTGG AGCaaattttgggaatatttaaAATGGAATTAATCAATGaatttattctt tcaattttctt

Coding sequence (CDS) from alignment at sc0000309:152317..163277+

>TCONS_00018812 ID=TCONS_00018812|Name=TCONS_00018812|organism=Clytia hemisphaerica|type=CDS|length=16443bp|location=Sequence derived from alignment at sc0000309:152317..163277+ (Clytia hemisphaerica)
atggaaattttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGA
TAAACATGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATC
TTGATATCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAA
CCCAAAACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCA
AAAGTCAGGTCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACG
GAAGACCTTTACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCAT
CAAGGAGTTCGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGG
TTGTGTAAGTAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGAC
CTGGAGTTATTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTT
CAAAAGATATCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGA
AATTCGAGAAAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTC
CCAGTGTAAGCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGT
AGTCTTTCCAAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGA
AATCATCAAAGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTG
CAATCCCGATTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAAT
AAGTTACCACACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGT
TCAACAACCAAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAG
CACACCAAGTTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAAT
GGAATGGCAATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGC
TGACACACCTAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAA
CGGAGGACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCT
TCTCTCGAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCC
GTCTTCACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCA
ATACAACCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATC
TCAGCCTCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGA
CTCTCAAGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCA
CTAAATACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAA
GCAAGACATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCA
AACATCCCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTC
GACGTTTAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTG
GCCTTCAAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGC
CACCAAAAATCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATA
AAAGAGCCAAGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCA
TCTAAGAGAAGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATA
TCATCCACACATGACACCAACATACGTTCCTTTATCACAACAACATTCAC
AAATCTTTCATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAA
ATCGCTCTCATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTC
GAAGGAATCTGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAG
TAGCAACAGCCAATGAACATTCCCCTAAAAATATAACATACATTACTGCA
CCTACATTGAATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCA
CCACCGCACACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTG
AACAGACTAATCTTGACACGACTGACGACTCACCATTGACAATAACAAAT
GCTAACTTACATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATC
CAAACATGTTCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTC
ACCATCCATCACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaa
aattcggCTGCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTT
GACACCGTCACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGAa
tggaaattttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGAT
AAACATGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCT
TGATATCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAAC
CCAAAACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAA
AAGTCAGGTCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACGG
AAGACCTTTACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCATC
AAGGAGTTCGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGGT
TGTGTAAGTAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGACC
TGGAGTTATTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTTC
AAAAGATATCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGAA
ATTCGAGAAAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTCC
CAGTGTAAGCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGTA
GTCTTTCCAAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGAA
ATCATCAAAGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTGC
AATCCCGATTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAATA
AGTTACCACACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGTT
CAACAACCAAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAGC
ACACCAAGTTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAATG
GAATGGCAATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGCT
GACACACCTAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAAC
GGAGGACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCTT
CTCTCGAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCCG
TCTTCACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCAA
TACAACCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATCT
CAGCCTCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGAC
TCTCAAGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCAC
TAAATACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAAG
CAAGACATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCAA
ACATCCCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTCG
ACGTTTAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTGG
CCTTCAAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGCC
ACCAAAAATCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATAA
AAGAGCCAAGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCAT
CTAAGAGAAGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATAT
CATCCACACATGACACCAACATACGTTCCTTTATCACAACAACATTCACA
AATCTTTCATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAA
TCGCTCTCATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCG
AAGGAATCTGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGT
AGCAACAGCCAATGAACATTCCCCTAAAAATATAACATACATTACTGCAC
CTACATTGAATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCAC
CACCGCACACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTGA
ACAGACTAATCTTGACACGACTGACGACTCACCATTGACAATAACAAATG
CTAACTTACATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATCC
AAACATGTTCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTCA
CCATCCATCACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaaa
attcggCTGCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTTG
ACACCGTCACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGAat
ggaaattttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGATA
AACATGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCTT
GATATCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAACC
CAAAACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAAA
AGTCAGGTCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACGGA
AGACCTTTACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCATCA
AGGAGTTCGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGGTT
GTGTAAGTAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGACCT
GGAGTTATTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTTCA
AAAGATATCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGAAA
TTCGAGAAAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTCCC
AGTGTAAGCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGTAG
TCTTTCCAAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGAAA
TCATCAAAGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTGCA
ATCCCGATTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAATAA
GTTACCACACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGTTC
AACAACCAAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAGCA
CACCAAGTTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAATGG
AATGGCAATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGCTG
ACACACCTAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAACG
GAGGACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCTTC
TCTCGAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCCGT
CTTCACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCAAT
ACAACCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATCTC
AGCCTCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGACT
CTCAAGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCACT
AAATACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAAGC
AAGACATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCAAA
CATCCCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTCGA
CGTTTAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTGGC
CTTCAAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGCCA
CCAAAAATCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATAAA
AGAGCCAAGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCATC
TAAGAGAAGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATATC
ATCCACACATGACACCAACATACGTTCCTTTATCACAACAACATTCACAA
ATCTTTCATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAAT
CGCTCTCATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCGA
AGGAATCTGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGTA
GCAACAGCCAATGAACATTCCCCTAAAAATATAACATACATTACTGCACC
TACATTGAATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCACC
ACCGCACACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTGAA
CAGACTAATCTTGACACGACTGACGACTCACCATTGACAATAACAAATGC
TAACTTACATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATCCA
AACATGTTCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTCAC
CATCCATCACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaaaa
ttcggCTGCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTTGA
CACCGTCACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGAatg
gaaattttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGATAA
ACATGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCTTG
ATATCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAACCC
AAAACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAAAA
GTCAGGTCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACGGAA
GACCTTTACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCATCAA
GGAGTTCGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGGTTG
TGTAAGTAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGACCTG
GAGTTATTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTTCAA
AAGATATCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGAAAT
TCGAGAAAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTCCCA
GTGTAAGCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGTAGT
CTTTCCAAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGAAAT
CATCAAAGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTGCAA
TCCCGATTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAATAAG
TTACCACACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGTTCA
ACAACCAAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAGCAC
ACCAAGTTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAATGGA
ATGGCAATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGCTGA
CACACCTAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAACGG
AGGACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCTTCT
CTCGAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCCGTC
TTCACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCAATA
CAACCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATCTCA
GCCTCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGACTC
TCAAGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCACTA
AATACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAAGCA
AGACATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCAAAC
ATCCCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTCGAC
GTTTAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTGGCC
TTCAAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGCCAC
CAAAAATCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATAAAA
GAGCCAAGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCATCT
AAGAGAAGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATATCA
TCCACACATGACACCAACATACGTTCCTTTATCACAACAACATTCACAAA
TCTTTCATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAATC
GCTCTCATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCGAA
GGAATCTGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGTAG
CAACAGCCAATGAACATTCCCCTAAAAATATAACATACATTACTGCACCT
ACATTGAATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCACCA
CCGCACACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTGAAC
AGACTAATCTTGACACGACTGACGACTCACCATTGACAATAACAAATGCT
AACTTACATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATCCAA
ACATGTTCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTCACC
ATCCATCACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaaaat
tcggCTGCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTTGAC
ACCGTCACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGAatgg
aaattttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGATAAA
CATGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCTTGA
TATCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAACCCA
AAACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAAAAG
TCAGGTCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACGGAAG
ACCTTTACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCATCAAG
GAGTTCGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGGTTGT
GTAAGTAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGACCTGG
AGTTATTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTTCAAA
AGATATCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGAAATT
CGAGAAAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTCCCAG
TGTAAGCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGTAGTC
TTTCCAAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGAAATC
ATCAAAGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTGCAAT
CCCGATTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAATAAGT
TACCACACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGTTCAA
CAACCAAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAGCACA
CCAAGTTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAATGGAA
TGGCAATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGCTGAC
ACACCTAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAACGGA
GGACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCTTCTC
TCGAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCCGTCT
TCACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCAATAC
AACCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATCTCAG
CCTCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGACTCT
CAAGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCACTAA
ATACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAAGCAA
GACATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCAAACA
TCCCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTCGACG
TTTAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTGGCCT
TCAAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGCCACC
AAAAATCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATAAAAG
AGCCAAGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCATCTA
AGAGAAGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATATCAT
CCACACATGACACCAACATACGTTCCTTTATCACAACAACATTCACAAAT
CTTTCATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAATCG
CTCTCATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCGAAG
GAATCTGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGTAGC
AACAGCCAATGAACATTCCCCTAAAAATATAACATACATTACTGCACCTA
CATTGAATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCACCAC
CGCACACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTGAACA
GACTAATCTTGACACGACTGACGACTCACCATTGACAATAACAAATGCTA
ACTTACATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATCCAAA
CATGTTCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTCACCA
TCCATCACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaaaatt
cggCTGCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTTGACA
CCGTCACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGAatgga
aattttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGATAAAC
ATGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCTTGAT
ATCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAACCCAA
AACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAAAAGT
CAGGTCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACGGAAGA
CCTTTACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCATCAAGG
AGTTCGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGGTTGTG
TAAGTAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGACCTGGA
GTTATTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTTCAAAA
GATATCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGAAATTC
GAGAAAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTCCCAGT
GTAAGCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGTAGTCT
TTCCAAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGAAATCA
TCAAAGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTGCAATC
CCGATTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAATAAGTT
ACCACACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGTTCAAC
AACCAAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAGCACAC
CAAGTTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAATGGAAT
GGCAATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGCTGACA
CACCTAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAACGGAG
GACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCTTCTCT
CGAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCCGTCTT
CACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCAATACA
ACCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATCTCAGC
CTCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGACTCTC
AAGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCACTAAA
TACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAAGCAAG
ACATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCAAACAT
CCCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTCGACGT
TTAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTGGCCTT
CAAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGCCACCA
AAAATCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATAAAAGA
GCCAAGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCATCTAA
GAGAAGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATATCATC
CACACATGACACCAACATACGTTCCTTTATCACAACAACATTCACAAATC
TTTCATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAATCGC
TCTCATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCGAAGG
AATCTGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGTAGCA
ACAGCCAATGAACATTCCCCTAAAAATATAACATACATTACTGCACCTAC
ATTGAATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCACCACC
GCACACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTGAACAG
ACTAATCTTGACACGACTGACGACTCACCATTGACAATAACAAATGCTAA
CTTACATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATCCAAAC
ATGTTCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTCACCAT
CCATCACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaaaattc
ggCTGCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTTGACAC
CGTCACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGAatggaa
attttcaaacatcaTCGATCACTGTTTGAAATAGAAAGTGTTGATAAACA
TGTAGTTTCCACGAACTCGGAAGCAATTAGCTCGTCTACAGATCTTGATA
TCAGCCAAACTTTGCAGGATGAAGCTGCTGCATTGCAAAGTGAACCCAAA
ACAATCACAAAGAATGAAGATGGCAACACTCAGAGTTGCAGTCAAAAGTC
AGGTCATGGAGGTGTCAATCAACTTGGTGGTGCCTTTGTCAACGGAAGAC
CTTTACCAGAGCGCATTCGGAAGAAGATAGTGGACCTTGCTCATCAAGGA
GTTCGCCCTTGTGATATATCGAGACAATTACGCGTTTCTCATGGTTGTGT
AAGTAAAATACTCGGACGTTATTACGAGACAGGTTCTATAAGACCTGGAG
TTATTGGAGGAAGTAAACCCAAAGTTGCCACACCCTCAGTCGTTCAAAAG
ATATCAGAATATAAACTGAATAACCCTTCAATGTTTGCATGGGAAATTCG
AGAAAAGTTATTGAGTGACCTGATATGTGACAATGAAACTGTTCCCAGTG
TAAGCTCTATAAACCGTATAGTTCGAAACAGGCTTGCTTCAGGTAGTCTT
TCCAAAGAACCAACAGAAGAGGAGATAGACACATCAACCAACGAAATCAT
CAAAGAAGAAGAACCCACTAATGAGAATCCTGTTTTTCAAGGTGCAATCC
CGATTCCTATCGGAGCTTTACCGGCAAATCTGAACTCGTTGAATAAGTTA
CCACACACACCATACTCCGTGAATGGGATCCTCGGGATAGCTGTTCAACA
ACCAAACGGAACTGTCATTATGTGTCCACCTGAATATTTTGCAGCACACC
AAGTTCAAGGGGCCACTGACTTGTCACCCACTGAACATACCAATGGAATG
GCAATCCAAGTGGTGAACGAAGCTGAAGATTCTCACACTATGGCTGACAC
ACCTAATTTAGCTGCTGCACAATacttaATACCGATCGGGTCAACGGAGG
ACAATCAGAACTTGGTGCAAATCAACTACCCTCCATCATTACCTTCTCTC
GAAGCAGAAACTGTTGAGAAAGAACATCCCCTACCACAACCTCCGTCTTC
ACTTGTCGAAGACGTTTCCATTCCTCCAACCAAACTACACATCAATACAA
CCAGCATTGAGAATAAACTGAAGGAGAACATTGATAACAGTATCTCAGCC
TCCAATAAAATCTTGATGAAGACAACACTGAACATCAACACAGACTCTCA
AGAAGAGGAACCATTGCGTGTCCACCAATCACCTTCACCCACCACTAAAT
ACATCTACACCAACCCATCACACCAAGAAGAGGAGAACTACGAAGCAAGA
CATCCACTGCAAATCCAACCAGCTTTCTTTCCCAACAGTCCTCAAACATC
CCCGGTCTCTAAGCATTTCCTCGAACACGACCGCAAACCAGGTCGACGTT
TAAGGACGTCTTTTTCCACCGAACAAAAACAAGCGTTAGAAGTGGCCTTC
AAGAAAACACCGTACCCTGACGCCATCCAACGAGAACAACTGGCCACCAA
AAATCAAATTCCGGAAGCCAGAGTACAGGTTTGGTTTTCGAATAAAAGAG
CCAAGCATCGGCGGCTGGACAAAAACTTCGACTTGCTGAAACCATCTAAG
AGAAGAAATTCCAAAAGCATCGAATCTCCATTATCTCCACCATATCATCC
ACACATGACACCAACATACGTTCCTTTATCACAACAACATTCACAAATCT
TTCATCCATCTCTTATCCCCATCATACCAGCAGCAGGCCAACAAATCGCT
CTCATTTCGCCATCACATCTTTATAACAGTGTCCCTCCATCGTCGAAGGA
ATCTGTTGAAGAACATTCGAAGAAAACGAACGAGCCAACGCCAGTAGCAA
CAGCCAATGAACATTCCCCTAAAAATATAACATACATTACTGCACCTACA
TTGAATTCTGAACAGCCAACAATGATACCGATTGGGGCGGTTCACCACCG
CACACACACGGAAGAAGCGATGGAAGAAATGCCGCAAAGACCTGAACAGA
CTAATCTTGACACGACTGACGACTCACCATTGACAATAACAAATGCTAAC
TTACATTCTAACAACCTCACTAACAACACTGAAACTGAAGAATCCAAACA
TGTTCTTCCTTCCATGAAAGTTTTGACAAGATACAACGATCGTCACCATC
CATCACTTTCTCATTCTTTCATCCCACCCGAAcaatggttgaaaaattcg
gCTGCTATCGCTCTTGGCGGTCGAGCTTCATGgacaTCTCCCTTGACACC
GTCACCTCCTCCGTTACATGTTGTCTCATCTTCTGGACAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010541XLOC_010541Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018812-proteinTCONS_00018812-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018812-exon-sc0000309-1491911889:152317..152462TCONS_00018812-exon-sc0000309-1491911889:152317..152462Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:152317..152462TCONS_00018812-exon-sc0000309-1510915933:152317..152462Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:152317..152462TCONS_00018812-exon-sc0000309-1575043694:152317..152462Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1491911889:152519..152671TCONS_00018812-exon-sc0000309-1491911889:152519..152671Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:152519..152671TCONS_00018812-exon-sc0000309-1510915933:152519..152671Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:152519..152671TCONS_00018812-exon-sc0000309-1575043694:152519..152671Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1491911889:158153..158923TCONS_00018812-exon-sc0000309-1491911889:158153..158923Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:158153..158923TCONS_00018812-exon-sc0000309-1510915933:158153..158923Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:158153..158923TCONS_00018812-exon-sc0000309-1575043694:158153..158923Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1491911889:159446..160050TCONS_00018812-exon-sc0000309-1491911889:159446..160050Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:159446..160050TCONS_00018812-exon-sc0000309-1510915933:159446..160050Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:159446..160050TCONS_00018812-exon-sc0000309-1575043694:159446..160050Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1491911889:160240..160699TCONS_00018812-exon-sc0000309-1491911889:160240..160699Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:160240..160699TCONS_00018812-exon-sc0000309-1510915933:160240..160699Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:160240..160699TCONS_00018812-exon-sc0000309-1575043694:160240..160699Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1491911889:161172..161415TCONS_00018812-exon-sc0000309-1491911889:161172..161415Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:161172..161415TCONS_00018812-exon-sc0000309-1510915933:161172..161415Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:161172..161415TCONS_00018812-exon-sc0000309-1575043694:161172..161415Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1491911889:162132..162492TCONS_00018812-exon-sc0000309-1491911889:162132..162492Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:162132..162492TCONS_00018812-exon-sc0000309-1510915933:162132..162492Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:162132..162492TCONS_00018812-exon-sc0000309-1575043694:162132..162492Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1491911889:162968..163277TCONS_00018812-exon-sc0000309-1491911889:162968..163277Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1510915933:162968..163277TCONS_00018812-exon-sc0000309-1510915933:162968..163277Clytia hemisphaericaexon
TCONS_00018812-exon-sc0000309-1575043694:162968..163277TCONS_00018812-exon-sc0000309-1575043694:162968..163277Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:152317..163277 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.0677 12.3944 3.23304 2.20574 28.5696 24.2994 20.0139 18.5254 6.92474 11.42 10.3127 5.68014 4.7666 5.35902 7.47382 9.15778 11.5177 10.2907 5.59501 4.88134 7.11012 8.11073 9.72447 10.5831 18.7691 13.9318 4.19669 4.29862 8.80363 8.70477
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001523Paired_dom
IPR001356Homeobox_dom
IPR011991WHTH_DNA-bd_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Blast
BLAST of TCONS_00018812 vs. Swiss-Prot (Human)
Match: PAX8 (Paired box protein Pax-8 OS=Homo sapiens GN=PAX8 PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 1.180e-70
Identity = 126/202 (62.38%), Postives = 151/202 (74.75%), Query Frame = 2
Query:  287 SQKSGHGGVNQLGGAFVNGRPLPERIRKKIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPSVVQKISEYKLNNPSMFAWEIREKLLSDLICDNETVPSVSSINRIVRNRLASGSLSKEPTEEEIDTSTNEIIKEEEPTNENPVFQGAIPIPIGAL-PANLNSLNKLPHTPYSVNGILGIA 889
            S +SGHGG+NQLGGAFVNGRPLPE +R++IVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATP VV+KI +YK  NP+MFAWEIR++LL++ +CDN+TVPSVSSINRI+R ++      ++P    +D+      K   P        G   IP  A+ P      + L  T YS+NG+LGIA
Sbjct:    5 SIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKV------QQPFNLPMDSCV--ATKSLSP--------GHTLIPSSAVTPPESPQSDSLGST-YSINGLLGIA 189          
The following BLAST results are available for this feature:
BLAST of TCONS_00018812 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PAX81.180e-7062.38Paired box protein Pax-8 OS=Homo sapiens GN=PAX8 P... [more]
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