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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018635 ID=TCONS_00018635|Name=TCONS_00018635|organism=Clytia hemisphaerica|type=transcript|length=1082bp
GTAGCCTATAAAGTAGACATCAGACAACCCATCAGACAACCACCAGACAC
CCAAGACTGCAGACGGCGCCTAGAGGACAGACAAATCAGCTATCCTAGTC
ATCCAGTATGGCTGAAGCAACTTCGCAGCCCATGACTGGCTTCTTTGCAG
TTCCCGTTAAAACAGACTGTCCCCATTTTAAGAATGCGTTGAATAACAAT
GTCCATCCAAACACACAAGAGAAATGTGAAAATTGTGAGAATATTGGTGA
GAATTGGGTTTGTTTGACATGCTGTAAAGTGTATTGCAGTCGATACGTGC
GTTCACACATGGTGCAGCATAATACAGGATCAAGACATCCAGTTGCATTG
AGCTTCTCTGATGCCAGTGTTTGGTGTTATACTTGTGATTCATaCATTGA
CGATCCTGTGCTCCGTCCAATATGTGATTCGGTTGCAAATCAGAGTTCAA
CTTTTGTCGTTGGAATTCAACCTAGCAGAAACCTCTGGCACTAACTGGCA
CCGTGGCTTTTttacaatgaagtataagcccaaagggctagaatcgaatc
tccttggtaggatttgaagccaacaaatcctaccaaagttgcgcggcctt
gagcggttCGCCTGgcttttacacaaatgacagattgaaactaaaattta
ccgctaaatttcgaaaaaactatcaatcgtaaacagaggaattgctagat
tcaatctgtcgtcaaaaatacggtgcattttttaaggcttcactttttct
tgcctgagaaaggttggagattctactctagccctacgggctttaaactc
gatgCTTTTTTATAGTATGGtgcaggcccggcggaacaaccgtaaaagtg
gaggGGCTAAAGGCTCAAAGTGAGATAGAATTCGCCAGGAATCGGAGAAC
AAAAGtctattttgcaaaaaaagtgagCGCTGGGCCTGTGGTGCGGATAA
TTTTTTCAAGGGTACTTTTGTTTCATTACTTATTCATGTCATTTTGTTAT
TTAttgtaatataattttattttttattaaaatgaaaaaatattttcgac
tcaTTCGATGGTGCTGGCTAATTAGATTTGGN Run BLAST on NCBI protein sequence of TCONS_00018635-protein >TCONS_00018635-protein ID=TCONS_00018635-protein|Name=TCONS_00018635-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
MAEATSQPMTGFFAVPVKTDCPHFKNALNNNVHPNTQEKCENCENIGENW
VCLTCCKVYCSRYVRSHMVQHNTGSRHPVALSFSDASVWCYTCDSYIDDP
VLRPICDSVANQSSTFVVGIQPSRNLWH Run BLAST on NCBI transcript from alignment at sc0000303:195449..205887- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018635 ID=TCONS_00018635|Name=TCONS_00018635|organism=Clytia hemisphaerica|type=transcript|length=10439bp|location=Sequence derived from alignment at sc0000303:195449..205887- (Clytia hemisphaerica)
GTAGCCTATAAAGTAGACATCAGACAACCCATCAGACAACCACCAGACAC
CCAAGACTGCAGACGGCGCCTAGAGGACAGACAAATCAGCTATCCTAGTC
ATCCAGTATGGCTGAAGCAACTTCGCAGCCCATGACTGGCTTCTTTGCAG
TTCCCGTTAAAACAGACTGTCCCCATTTTAAGGTATCGATTGAATCTATT
TTTTGATTTTTTTCTATATATTTTCACTTTCGTTTTCTATTATAGGTAAT
GATTTTCAATTTCCAGACGATGTCAATCGAACGAATCGAACGCCGAATCA
ATTGAACGCAATCGAACGCAATCGAATGATTGAAATTCGATTGCCGAACG
CAATCGAATATCAATCGAACGTAATCGAATATCAATCGAACGGAATCGAA
TATCAATCGAACGTAATCGAATATCAATCGAACGGAATCGAATATCAATC
GAACGTAATCGAATATCAATCGAACGGAATCGAATATCAATCGAACGTAA
TCGAATATCAATCGAACGGAATCGAATATCAATCGAACGTAATCGAATAT
CAATCGAACGGAATCGAATATCAATCGAACGTAATCGAATATCAATCGAA
CGGAATCGAATATCAATCGAACGTAATCGAATATCAATCGAACGGAATCG
AATATCAATCGAACGTAATCGAATATCAATCGAACGGAATCGAATATCAA
TCGAACGTAATCGAATATCAATCGAACGGAATCGAATATCAATCGAACGT
AATCGAATATCAATCGAACGGAATCGAATATCAATCGAACGTAATCGAAT
ATCAATCGAACGGAATCGAATATCAATCGAACGTAATCGAATATCAATCG
AACGGAATCGAATATCAATCGAACGTAATCGAATATCAATCGAACGGAAT
CGAATATCAATCGAACGTAATCGAATATCAATCGAACGGAATCGAATATC
AATCGAACGTAATCGAATATCAATCGAACGGAATCGAATATCAATCGAAC
GTAATCGAATATCAATCGAACGGAATCGAATATCAATCGAACGTAATCGA
ATATCAATCGAACGGAATCGAATATCAATCGAACGTAATCGAATATCAAT
CGAACGGAATCGAATATCAATCGAACGTAATCGAATATCAATCGAACGGA
ATCGAATATCAATCGAATCAATCGAATTTTACCCAGAATTTTACGTTCGA
TTGATATTCGATTGCGTTCGGCAATCGAATCGCAATCATTCGATTTCGTT
CGATTGCGTTCGATTGATTCGATTGGAATTTTCGTTCGATTCCGTTCGAT
TGACATCGTCTGGCAATTTCCAGTACCATCTAAAATTTTTACACACTGAC
ATACACCAATGATATCAAAAATTATTTACTTATCAATCTTTTTATAGTTC
TCAAATCTCTGCTCTAACCAAACACCAAATAAAACTTTAGCCGTCATTGA
ATCAGATCAGGCAGCTGAGGTCACAAAAAAATTGGACGGGATGCAAACAA
ACCGAAACCAATTTTAATAAAAAATATACAGCCTACATTGAACCACGTCT
AGCAAAAGGTCTATTATAATAAAGCAATAAAGAGGTTGCAGATGTAATAA
TATACTAAGCATGTGGGCTTGCGCTCGATGAAAAAAGACTTTTAGTAGAA
CTCGAGCTTTAGCTATAATATCAGTATTTTTATCGAATCTTTTCATTCAG
AAGACTTTATAACTTTGTCTGCCTATCCCTTTTCACCCGGGTTGCTTCTT
GTACACTGTACTTTAAATCACAGTGAAGGAGAACAAGCCACTAGAAGAAT
ATATTTTTCGCTGACCAAGAGAGTTACTCAAAAGTGGGGGACTACTTAGA
ATTCTAAGAATTCTAAAATTTTTAGGGGTACCAAAATGATTGGGGGTGCC
AAAATGATTGGGGGTGCCAAAATGATTGGGGGTGCCAAAATGATTGGGGT
GCCAAAATGATTGGGGGTACCAAAATGATTGGGGGTACTAAACTTTTTGA
GGGTACCTGAACCCTGGAGGACCCTGTGGCTTAGATCTGTATATATATAA
TCGATTTGAAAGAAATATCTATTGAAAATCTAGAAGTACCAGTCTAGTTC
TAGTTCTAAAACCACCTTAAAACCTCTTATGAATGTACTTTCATAATCAT
AAAAAAACCTAATTTCGGGAATTTCACTTATCACAAAGTGTTATAAAATT
CAAAGTTATCAAAGTTTTAGCAAGAATCTCTTCAAAAAATTAAGTCTCTC
GGACCTAGAGATTACACAAATGTATTTAAGGTCATAAAACCTATACTTTT
TTGGTACCTACACTTATGGCAGGCATGAAAAAATTGGAGAAAAACCTTTG
TATGAACTATAGACATAGCCTGGGAATCCAAGCGTTAAATTTTATTCACA
GTCTAGTTTATGATATTTTTGCTACTTGTTTAACGCTTGGCGCAGGTAAC
TCGCCTGCAGGGAGATTTTTCCCTGCAATGCAGGTTCGGCCTGATTGGCC
AGCTTTCGGCGTATTACTTAGCAGTACTTTCGCGCGCATTTTGCTAAAAT
TTCGATGCAGGCACATAATTTATGGAAAAAGCTGACTCTGCAGAAAAAAG
GAAAACAAATGAAAATGAAAACATAGATTCATTTCGAAACAAAATGGCTG
TTGGCTGGAAGTCTAAATACATGGCTGATGTTTTGATGTGGTTTTTAGTA
GTTTTGAAAGTCTTTAGAGCTTGTGAGTCAGCCATCCTGTAAGGGAGATA
GGCAGGGAGCAGTGGCTGGTCGGGAACATCTTGCAGAAATTGATCAAGTT
GTTTTTTGAAGGAATTTTTGGAACATTTGGTCATGTCCCGTATTTTTCTT
GGTAACACATTGAATAGTCTTGGACCGGTGTCTGAAAGGCAGCTCTTCCA
AATGTTCTTGTTTGTTTTATTCACTGGTTTGAGGTGGCATTTTCTTCCCA
GGCATTGGTTTGTATATGAATAAATACCGCCTTCCCCTTCACCATAGTTA
AAATTTGGCACCAGTTGTTCGATTATACACCATGTATATATAATTTGGTA
TCTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCTTCTCTCGAG
ACTGTACATATTGAGGTGTTTGAGCTTCTCCCAATAATTCAAATTGGGTG
GAAGTTGGATCCCTTTTATAAAGGATTTTTGCAGATAATCCAGTTCTTGC
ACCAGGGATCGCTTTGTAGGAGACCATAGCTGGGAGCAGTATTCCAGATG
TTGAAGTACCAATGTCTTCCAAAGAGTGATCATTACTGATTTATCTCTGG
ACTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATATCCA
GGCACTTATACCCTTGACTCTGTCAGTGATCGTTTGAATGTGCATTTCAT
ATGACAGGTTGTTTGAGAGCAGGATACCCAGGTCTTTCACTGAACTTTTT
ATTTCGATTGGCTGCTGTACATCTGATTTGTAGACTGAGTGTACTTTCAG
TTGTTCATATTTTCCGTATGCAATGTGTTCAAACTTTTTTCCATTGAGCT
CCATATTGTTGATGGATGTCCAGTCATAGACAACGTCTAGATCATCTTGA
AGCAGACTCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAAGATATTG
CCTTCATAAGTCTTGTGTCGTCAGCAAAAGATGAGAGGATGGAATGTTTA
ATCTTTTCGTTTATGTCACTGATCATTACCAGAAACAAAAGGGGTCCCAG
AACTGAGCCTTGTGGAACTCCGCTTGTAACTTTCGCTTCATCTGATAGGA
ACGTGTTTATGGAAACTTTTTGGTATCTCTCAGTAAGGAAGGATTGTATC
CAGTTCAATAGTTCAAATGTCCTTTGATTCCATTGATTTTTAGCTTGTGT
AGCAAGATGTGATGGTCCACCTTGTCAAAGGCCTTGCTGAAGTCAAGGTA
GATTACATCAACATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTGGATTTTTCAGTGGGCCAACTTTAGGTTTAGTTTTTGTGAATCTT
TTTGCATAGGAGTAGAAGTATTTAGGATTGCTTTTGATTTTCAGTGAGGC
ATCTAGCTCTGCTTTATCGCGTTCATTTTTGTGGGATTGCTGTAGCATCA
GTTCAATTTCAATTAGTTTCTGATTTGTTTTATTGGTTTTGAAATTCTTT
TTGGAGAGTCTTTTACGTTTTCTCATAAGAATACGACGATCTCTTGGAAT
CTTTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTGTAGAGGTCAAATTTGCTTATTAA
GTTACGTTCTTCAGTTTCTCCGAATTGATTATCAAAATTCAGATGTGTTG
TAACATCTACAACAAGATGATCTGAATGAATAGTGGGCGAGCATGTGTAA
TTAAATACAGTGTCTGTGTTGTTTGTGAATAGAAAGTCTAAAATATTACC
ATCACGGTGTGTTGATTTGTGTATCAGTTGATTAATGTGCAAGTCTGCTT
TAAAAACATTTAAAACGTCCAGAAGCTGTTTATTGCAATTTCGTGTTGGG
GTTGAAGTCTTATCGTTAAGAGGTATGTGTGGTATGTTAAAATCCCCAAG
GATGTATGTGTCAGGTGTACAATCAGTAATACTATCAAGTTTTGCTATCA
TTGCAGAAAGGAGTTCTTGTAATTCAGGTGCTTCAGATTTGTGGTCTGGA
TTGTTGGGTTGTCTGTAGATAACACAGAGAAGAATATTAAATTGTTTTGA
TAAAAGCATCAATGCTTCATTTACTCCGTTCGAGAATTCGAAAATGGGCT
TGAATAATGGTGCAATGTCATTACGCACATAAAATGCAACGCCTCCGCTT
GCTCTGCCATATTTCGATTTTACTCTGTCTCTGTCTGTTTTTCTTAAAAA
AAGTTTAATTTTCAATCTCTCCTTTTTTGTGATTGTCTGTTAACCAGGTT
TCGGTTAAGCCTAAAAACAGTTGTTTTGAGCTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAGTCACTGTCCCAGTAGATTCCTTGGAAATGTTGGTTCCATTGTGGG
GTGCTGGGGTGGTAGATGATGTAGGGGATGTTGACGATTGAATGTTTGTT
GAAGTTGATGTGACAAATCGTGGTTCCTGAATTGTATTTGTTGGTTTTGG
TTGCTGAAACAATTGTTCACAAGAGAGATTATTTCTGTGCGAAAGTTGTC
CAGGATTGCGAGAAAATCCTGAGGTTCATCATTACGATTGTTTTGCTTTT
TCTGATATCGTTTGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTTCAGTCCATATTTACATT
TTCCTTTTATGTAGAAGCGACATATTTGATCATTTGTCTTTGATTTGGTC
TGAGATCTTGATCCAGGATATTGGGCGTGACCGTTGTTGCTGTTGTTAAA
GTTGATTTCATTTGGTGGTCCGCCAGCTGTTTGGTTTATTATGTTGGAAG
TATCGTCTTCTGTCATTGGTGCATTGATCTCATCGTCCTCATCTACTACT
CCCTCTATAATCTTAGAACTTTGTGAGGTGAGGTATTATTTGTTTTTTTT
TCTAAGATTATGACCTTGGATTCCCATGCTACCATAGACAGCGTATTTTC
AACACAAAAAGTTTCAGTCTAAAATCCCACCTAAATTTTCAAATAGGGTT
TTTTTTTAAGGTTTTAAGGGGTAGCCAATGATAATAATTTTGCACTCGCT
TATAGCTTGAAAAAAGTACAGGTTTTTTGGTGAAGGCTGGAAAAAGGTAC
ATTTTCCAGCTCAAAATACCTGGAAAAAAGGATGTTTTTGACCAAAAAAG
CTGGGTTTTTCATCTAAAATAAGCGTGGCCACCCTTAACAAATTTTTGTT
CAATTTCCCTATTCGTTAAAATTCTGTTTTGGAAAGATATTTTCTTAAAA
GGCAGAAAAGACATTTCTTTATAATCTAAAGCCATTTTAGACTCAATTCT
TAGACAAAAAGTCACTGGAGAATTTCAGAGGAAAGTATCCAGCAATAGAG
TTCACTTTGAAGTAGGCAAGGGTGGCTATAATAACATACATCTCCTGTTT
TTCTATATACACTGGTCTTTTATATCTTATATAATAGTTCAATAGTACAA
GTCCTTATTTCAATTTTTTTTAAAGCAGTTTTTAATTAAGTTATTTCAAT
ATGAATTGAGACATTTCTATATAGATTGATATAAAAAAGATGACATAAAG
ATGTGCATATAAATCCCTTCATAAAGTGTCAAATGAAGTTTGAAAATAGA
ATAGAAATTTCCAAACCATTTTTATAGTTTTGTCTATTGGCTTCAGGTAA
TCTACCTTAAGAAAAGAAATTTTCACTGGATAAATTTTTTGCGGTTTTTT
GACATATCCGCAAAATTAAATTCTGTGTGATTTAAATTAATCAAATTCTC
AGGATTTCAAAAATCATTGCTAAAATTGGTCTTTTTAGGACCAAATAGAC
CCTATTGTAAACAAAAAATTCTCAACCCGGAAATTAAATTCTGCGAAAAT
CTTTCTCTTTTACAGTAAGGTAAGTTATTGCCAAATAAAGACAGGAAATA
TTCTGAAAACGCTGATCAACTTCAAACACTCTAAAATTGAATTGGCATTT
TTAAAGATGGAAAAAACAACATTTCATTTTTATTTCATTTATTAATATTT
AAAGAGGAGCATACATTAGATAAATAAATAAATTTACAACTGCTATCAAC
GTCACTCCTCTCATCAAAACCATGCACATGCTTCACAGAACACCCTCAGG
ATACTCACTCAGAACAAAAACGATATGAAAATATAAAAAAATATAAATAT
AGAATAATAAATACTATATCAAAATAAAATTATTTTAGATTATTATTGAG
GCTTTATATAAATAGGCTAAAGTATAATCGAAAAGGTATAAAAAAGGTTG
CACCTGAAACGGTAAAACTTTGAAGAGCTTTCAAAAGAAAAAGCAACATT
TGAAAGAGATATTACTTAAAAAATCCAAGATTTGCCAAAAACATTGGGGG
CAATGTAGGGTAGGTTCAAACAAGAAAGGATTTGAAAATTTTGGTCAATT
TAATCATATATAAATGGCTACAGTTTGTTTTAAACATAAATATGTACCAA
CAAAACACAAAAATACGCACCATTCAATAAAAACGCTAGTTATATTATTA
TTATATTGTGAGATTTTTGGCTCGTGAGTATTTATTTTATACTCTTTGAT
CATTTTGGTGGCGCATAGAGCAAGTTTTTTTTTTGAAACAGATTTCTTGT
AAAAATGAGGGGATAAGATTTCATTACTGAGGGGGGAGGGTGAAAAAAAC
CTAGGGGCTCATGCAAACTATGACAACTTTGAATAGGCCAAAATTTGGAT
CATATTTTGTCATATTTCCTCATATTTCATTCTAGAATGCGTTGAATAAC
AATGTCCATCCAAACACACAAGAGAAATGTGAAAATTGTGAGAATATTGG
TGAGAATTGGGTTTGTTTGACATGCTGTAAAGTGTATTGCAGTCGATACG
TGCGTTCACACATGGTGCAGCATAATACAGGATCAAGACATCCAGTTGCA
TTGAGCTTCTCTGATGCCAGTGTTTGGTGTTATACTTGTGATTCATGTAC
GTCTCTTTTTAGTAAATTAGAATCCAGGAGGTCCATAAAAAAAGAAAATA
GACAAAGCAATAAAATAAAAGTAAAAACTACCCTTTATTCTGGAATAGCT
GCTGAACACGCCATTTCTTAGACACTTTTAGCTCAAATTTTCGTCCCATA
TCGATTTTGGAGTACATGATTTTTTTTAAAGACTAGTTTTTTTTGCTAAC
CTTGTTGAAAAAATTCGAGGATATTAGTTACATACTGAAGTGCACACTAC
TCATGCACAGACCTCTTACCACAATCTTTTGCATTCATTTTTGCATTTTT
TTTAGACATTGACGATCCTGTGCTCCGTCCAATATGTGATTCGGTTGCAA
ATCAGAGTTCAACTTTTGTCGTTGGAATTCAACCGTAATTATAATATGTG
GTTGTTAAAACCTTGTCATCCTTTGTTTCAATGCAAAATAAATTATATGT
TAACCCAAATACTCTTTACTTTAAAATTCATACAAAGATTTTTCGATTTG
AGAACTCTGACCTCAGTCAAGAAACTGGTTTTAGGATTGAAGATGCGCAT
TACGATTTAACTTTTACCTTCAGCCCAATTTTGTCAATTGTTCTTCAATG
GTTGTCAAACTTTATAACTTGGTACGGTGGGCACGGAAGGCGTTTCTCCT
CGAACATAATATCCTATGTAAATCAAATACAGTAATATAAACTACAGTGC
ACGTTTTTTTTCTATATCAAGGTCCAAAATTTTTGAAGCCTTCGTATGTT
CTTAACATTTTCACCATTTTGTGAGTATTTTTGTCCATTTTCCTGAGAAA
TTAGGCGTTTGCTGCCTGCAAAGCTTTAAAATGTTCTCAACTTGATCAAA
ATATTTTGTCCATCGAAGCCTCATATATTGTTATATATAGTTTGTGAAAA
AACCGTATATGATTTTATTATCTCTTTAGTAGCAGAAACCTCTGGCACTA
ACTGGCACCGTGGCTTTTTTACAATGAAGTATAAGCCCAAAGGGCTAGAA
TCGAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCG
CGGCCTTGAGCGGTTCGCCTGGCTTTTACACAAATGACAGATTGAAACTA
AAATTTACCGCTAAATTTCGAAAAAACTATCAATCGTAAACAGAGGAATT
GCTAGATTCAATCTGTCGTCAAAAATACGGTGCATTTTTTAAGGCTTCAC
TTTTTCTTGCCTGAGAAAGGTTGGAGATTCTACTCTAGCCCTACGGGCTT
TAAACTCGATGCTTTTTTATAGTATGGTGCAGGCCCGGCGGAACAACCGT
AAAAGTGGAGGGGCTAAAGGCTCAAAGTGAGATAGAATTCGCCAGGAATC
GGAGAACAAAAGTCTATTTTGCAAAAAAAGTGAGCGCTGGGCCTGTGGTG
CGGATAATTTTTTCAAGGGTACTTTTGTTTCATTACTTATTCATGTCATT
TTGTTATTTATTGTAATATAATTTTATTTTTTATTAAAATGAAAAAATAT
TTTCGACTCATTCGATGGTGCTGGCTAATTAGATTTGGN Coding sequence (CDS) from alignment at sc0000303:195449..205887- >TCONS_00018635 ID=TCONS_00018635|Name=TCONS_00018635|organism=Clytia hemisphaerica|type=CDS|length=1548bp|location=Sequence derived from alignment at sc0000303:195449..205887- (Clytia hemisphaerica)
TAGCAGAAACCTCTGGCACTAAACATTGACGATCCTGTGCTCCGTCCAAT
ATGTGATTCGGTTGCAAATCAGAGTTCAACTTTTGTCGTTGGAATTCAAC
CAATGCGTTGAATAACAATGTCCATCCAAACACACAAGAGAAATGTGAAA
ATTGTGAGAATATTGGTGAGAATTGGGTTTGTTTGACATGCTGTAAAGTG
TATTGCAGTCGATACGTGCGTTCACACATGGTGCAGCATAATACAGGATC
AAGACATCCAGTTGCATTGAGCTTCTCTGATGCCAGTGTTTGGTGTTATA
CTTGTGATTCATATGGCTGAAGCAACTTCGCAGCCCATGACTGGCTTCTT
TGCAGTTCCCGTTAAAACAGACTGTCCCCATTTTAAGTAGCAGAAACCTC
TGGCACTAAACATTGACGATCCTGTGCTCCGTCCAATATGTGATTCGGTT
GCAAATCAGAGTTCAACTTTTGTCGTTGGAATTCAACCAATGCGTTGAAT
AACAATGTCCATCCAAACACACAAGAGAAATGTGAAAATTGTGAGAATAT
TGGTGAGAATTGGGTTTGTTTGACATGCTGTAAAGTGTATTGCAGTCGAT
ACGTGCGTTCACACATGGTGCAGCATAATACAGGATCAAGACATCCAGTT
GCATTGAGCTTCTCTGATGCCAGTGTTTGGTGTTATACTTGTGATTCATA
TGGCTGAAGCAACTTCGCAGCCCATGACTGGCTTCTTTGCAGTTCCCGTT
AAAACAGACTGTCCCCATTTTAAGTAGCAGAAACCTCTGGCACTAAACAT
TGACGATCCTGTGCTCCGTCCAATATGTGATTCGGTTGCAAATCAGAGTT
CAACTTTTGTCGTTGGAATTCAACCAATGCGTTGAATAACAATGTCCATC
CAAACACACAAGAGAAATGTGAAAATTGTGAGAATATTGGTGAGAATTGG
GTTTGTTTGACATGCTGTAAAGTGTATTGCAGTCGATACGTGCGTTCACA
CATGGTGCAGCATAATACAGGATCAAGACATCCAGTTGCATTGAGCTTCT
CTGATGCCAGTGTTTGGTGTTATACTTGTGATTCATATGGCTGAAGCAAC
TTCGCAGCCCATGACTGGCTTCTTTGCAGTTCCCGTTAAAACAGACTGTC
CCCATTTTAAGTAGCAGAAACCTCTGGCACTAAACATTGACGATCCTGTG
CTCCGTCCAATATGTGATTCGGTTGCAAATCAGAGTTCAACTTTTGTCGT
TGGAATTCAACCAATGCGTTGAATAACAATGTCCATCCAAACACACAAGA
GAAATGTGAAAATTGTGAGAATATTGGTGAGAATTGGGTTTGTTTGACAT
GCTGTAAAGTGTATTGCAGTCGATACGTGCGTTCACACATGGTGCAGCAT
AATACAGGATCAAGACATCCAGTTGCATTGAGCTTCTCTGATGCCAGTGT
TTGGTGTTATACTTGTGATTCATATGGCTGAAGCAACTTCGCAGCCCATG
ACTGGCTTCTTTGCAGTTCCCGTTAAAACAGACTGTCCCCATTTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018635-exon-sc0000303-1575043694:205706..205887 | TCONS_00018635-exon-sc0000303-1575043694:205706..205887 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1575043694:196992..197202 | TCONS_00018635-exon-sc0000303-1575043694:196992..197202 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1575043694:196604..196682 | TCONS_00018635-exon-sc0000303-1575043694:196604..196682 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1575043694:195449..196058 | TCONS_00018635-exon-sc0000303-1575043694:195449..196058 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1510915933:205706..205887 | TCONS_00018635-exon-sc0000303-1510915933:205706..205887 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1510915933:196992..197202 | TCONS_00018635-exon-sc0000303-1510915933:196992..197202 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1510915933:196604..196682 | TCONS_00018635-exon-sc0000303-1510915933:196604..196682 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1510915933:195449..196058 | TCONS_00018635-exon-sc0000303-1510915933:195449..196058 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1491911889:205706..205887 | TCONS_00018635-exon-sc0000303-1491911889:205706..205887 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1491911889:196992..197202 | TCONS_00018635-exon-sc0000303-1491911889:196992..197202 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1491911889:196604..196682 | TCONS_00018635-exon-sc0000303-1491911889:196604..196682 | Clytia hemisphaerica | exon |
| TCONS_00018635-exon-sc0000303-1491911889:195449..196058 | TCONS_00018635-exon-sc0000303-1491911889:195449..196058 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000303 | supercontig | sc0000303:195449..205887 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
BLAST of TCONS_00018635 vs. Swiss-Prot (Human)
Match: HDAC6 (Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.386e-19 Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 3
Query: 141 FFAVPVKTDCPHFKNALNNNVHP------NTQEKCENCENIGENWVCLTCCKVYCSRYVRSHMVQHNTGSRHPVALSFSDASVWCYTCDSYIDDPVLRPICDSVANQS 446
F+AV CPH V P + + C +C I ENWVCL+C +VYC RY+ HM+QH+ S HP+ LS+ D S WCY C +Y+ L + ++A+Q+
Sbjct: 1104 FYAVTPLPWCPHLVA-----VCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDV-KNIAHQN 1205
The following BLAST results are available for this feature:
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