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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018589 ID=TCONS_00018589|Name=TCONS_00018589|organism=Clytia hemisphaerica|type=transcript|length=2298bp
tgaaattttgatttcttcaATGTGTTGAATGTAATTACTCTGGTTGATGA
TGATTGCATACTTTCTTATGTCAACATTTAATCCCACGTACTTGAAAGGt
gcatcaaattcaaaataagttAAACCACCAATCATTAAATTGTAAACACA
TTTATTCAAATGCCACAGCTTGCCCGTTTTTTCCTCTTTGGGTGGTTTGA
TGAGAATTTCTCTGTCAAGTGTGTTGCCCTGTAGAAATGCACCATTGATT
TGCATGTCCAATTGGAGGATGCAATGATTGCATTAAAGTTATCCTCATAG
CCTCCTTTGAGCAAGTAGGTGAATCATGTTCTTCGGTTAGATCCCTCTTT
GTCTTCACATCCTCTTGTATAGAGTCTTGATTTAGTGACGTCAAGACCAT
TCACCTTCTTGGTCTCAATCATCCTACCAACAGCTGATGGCGCGttggtt
ttttttcttcaattttggaGTTGAACTTTGGAGAGAACTGATGATTGGTG
CCTGAGtaccatgaaactctgagtttgaaacatgaatattgtgtcaactc
tttattatagaACGATCTCTATTAACTTATAGAGCACTCTCTGAGGAGAA
GATATAAACCCTCAACAACAACTTTGGAGTATACATTAATATCCGACCAA
TTGTTTAGTTCCTTTTCTTTGGCAGCTTGTATGTTTTCTTTGTTAACAGA
TGATGCATAATACCTCCTCAGTAATTGGATGCCATACGAGCACTTCTGAC
AAAAAATCTAACACCTTGATCTTTTTCTCCTCAGGCTATTTTCCAGTAGC
CTCCCCTGCTCTTCTGTGGATAATACCTTCTGCCAAGTCTTCTGAATCAT
TCATCTTGTATGCGATTTGGGTTCTCATGGGTGGTAAGAGGATCTTTGGT
TTTTCCAATGACTTCTTTGTACTTGGACCTGGCTTTGGAACATTATCCGG
CTCAACAATTTCTGATCTTGATTGGTTTTCTTCTTGAACTTAGTCATGAT
TCTCGTCTTGTTTGTTATCGTCATGCTCCTCGTCACTTTCTACTGTCTGG
ATCTTGGATGCCTTATCCTCAGCTTCTTCTATGTACATGTATACAAGGCT
TGCAGGGTGCACTCTGATGCTGATGGTCTCTCCTCTGTGTTTGATTATGA
CATTCTTATAATCTTGATCGATGACGTTGGCTGTTTCTTATTGTTTAGGG
TTGTTGTTTCTTTTGTAGTACACTTTGTccccattttcaaaaatactttG
TCATTGCAAGACCTGACCTTGTGTTTCAGTGTGCATTTAATTTCTCTGAT
AATTCCGCTTGAATGAAAGCTGTATTAGCGTTAGTTAATACTTTCAGGTT
ATTCTTGACTCTTTTACTGAGAATGTTAGTTTCCAAGGCTGGCAAAGTGT
TGGTAAGGACGTCTGGGTAGTTTGTATTTCTTCCAAAAACCAACATATTG
GGGCTAAATTCTTGATGACCACTTAAGGAATTCACAGTGCTGTTTCCAAA
CTGCATTTTAACTCATTCATTGTCTTCCTAACAGGCTCTTTTATCACAAC
ATTGTATCACCATGACATCTTGCTTCTTAGATCTCCTTACAAAGGCAGCA
GAATACCTTGAAAACAGGTCAATCAAGTGTAGAACCCAAATACCTTGTTC
ATAAGTGACCAAATCCATCACAACTGTTTGGTTGAATTCTGATGCCCAGG
GAATGCTAGAAATTGGTTTCAACTTCCTCTTCTTGTATCTTTTGCACACA
TCACAAGACTTCCTTTATTATTCTTGAAACCTGCTTCGAATCATTCCTAT
ACATAGGGacgtagtggtatagtggttatcatccttgactcccGCTTGGG
AAGCCCGAGTTTGATACCCATCGTGTGAACATACCTTCGCCTGGGTCAAT
TTTTCCACAATTTCCCtatggggccatccatatagtgcgtacgcagtgaa
gggggaagaggggggtttagcaaaagcgtacgtctattgtttaaatgacg
ttTCATATTTCACAAAGCTTGCACGACTTTGAAATATTCTTGTAACTTTT
AATCTGTTTTACTTTTGGCCATTTCAAGgtgattcttttgtttcaattcC
CAAATGCAGAACGACAATCTAGTTTTTGCTGCAAAAATTTGCTGTGTTTA
TTAATTCTAgctttaattttagaaaaacagcaaCCAGAAGACTGAAGCCa
tctaaaaaaatcttttggaagCTCTGAAGACAATAATTCATCCAGTTAGA
AATGTCTTGACAAATAATTTTAAACAGGAAAAAGTTATGGCATGAAAA Run BLAST on NCBI transcript from alignment at sc0000301:183623..185920 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018589 ID=TCONS_00018589|Name=TCONS_00018589|organism=Clytia hemisphaerica|type=transcript|length=2298bp|location=Sequence derived from alignment at sc0000301:183623..185920 (Clytia hemisphaerica)
TTTTCATGCCATAACTTTTTCCTGTTTAAAATTATTTGTCAAGACATTTC
TAACTGGATGAATTATTGTCTTCAGAGcttccaaaagatttttttagatG
GCTTCAGTCTTCTGGttgctgtttttctaaaattaaagcTAGAATTAATA
AACACAGCAAATTTTTGCAGCAAAAACTAGATTGTCGTTCTGCATTTGGg
aattgaaacaaaagaatcacCTTGAAATGGCCAAAAGTAAAACAGATTAA
AAGTTACAAGAATATTTCAAAGTCGTGCAAGCTTTGTGAAATATGAaacg
tcatttaaacaatagacgtacgcttttgctaaacccccctcttccccctt
cactgcgtacgcactatatggatggccccataGGGAAATTGTGGAAAAAT
TGACCCAGGCGAAGGTATGTTCACACGATGGGTATCAAACTCGGGCTTCC
CAAGCgggagtcaaggatgataaccactataccactacgtCCCTATGTAT
AGGAATGATTCGAAGCAGGTTTCAAGAATAATAAAGGAAGTCTTGTGATG
TGTGCAAAAGATACAAGAAGAGGAAGTTGAAACCAATTTCTAGCATTCCC
TGGGCATCAGAATTCAACCAAACAGTTGTGATGGATTTGGTCACTTATGA
ACAAGGTATTTGGGTTCTACACTTGATTGACCTGTTTTCAAGGTATTCTG
CTGCCTTTGTAAGGAGATCTAAGAAGCAAGATGTCATGGTGATACAATGT
TGTGATAAAAGAGCCTGTTAGGAAGACAATGAATGAGTTAAAATGCAGTT
TGGAAACAGCACTGTGAATTCCTTAAGTGGTCATCAAGAATTTAGCCCCA
ATATGTTGGTTTTTGGAAGAAATACAAACTACCCAGACGTCCTTACCAAC
ACTTTGCCAGCCTTGGAAACTAACATTCTCAGTAAAAGAGTCAAGAATAA
CCTGAAAGTATTAACTAACGCTAATACAGCTTTCATTCAAGCGGAATTAT
CAGAGAAATTAAATGCACACTGAAACACAAGGTCAGGTCTTGCAATGACa
aagtatttttgaaaatggggACAAAGTGTACTACAAAAGAAACAACAACC
CTAAACAATAAGAAACAGCCAACGTCATCGATCAAGATTATAAGAATGTC
ATAATCAAACACAGAGGAGAGACCATCAGCATCAGAGTGCACCCTGCAAG
CCTTGTATACATGTACATAGAAGAAGCTGAGGATAAGGCATCCAAGATCC
AGACAGTAGAAAGTGACGAGGAGCATGACGATAACAAACAAGACGAGAAT
CATGACTAAGTTCAAGAAGAAAACCAATCAAGATCAGAAATTGTTGAGCC
GGATAATGTTCCAAAGCCAGGTCCAAGTACAAAGAAGTCATTGGAAAAAC
CAAAGATCCTCTTACCACCCATGAGAACCCAAATCGCATACAAGATGAAT
GATTCAGAAGACTTGGCAGAAGGTATTATCCACAGAAGAGCAGGGGAGGC
TACTGGAAAATAGCCTGAGGAGAAAAAGATCAAGGTGTTAGATTTTTTGT
CAGAAGTGCTCGTATGGCATCCAATTACTGAGGAGGTATTATGCATCATC
TGTTAACAAAGAAAACATACAAGCTGCCAAAGAAAAGGAACTAAACAATT
GGTCGGATATTAATGTATACTCCAAAGTTGTTGTTGAGGGTTTATATCTT
CTCCTCAGAGAGTGCTCTATAAGTTAATAGAGATCGTtctataataaaga
gttgacacaatattcatgtttcaaactcagagtttcatggtaCTCAGGCA
CCAATCATCAGTTCTCTCCAAAGTTCAACtccaaaattgaagaaaaaaaa
ccaaCGCGCCATCAGCTGTTGGTAGGATGATTGAGACCAAGAAGGTGAAT
GGTCTTGACGTCACTAAATCAAGACTCTATACAAGAGGATGTGAAGACAA
AGAGGGATCTAACCGAAGAACATGATTCACCTACTTGCTCAAAGGAGGCT
ATGAGGATAACTTTAATGCAATCATTGCATCCTCCAATTGGACATGCAAA
TCAATGGTGCATTTCTACAGGGCAACACACTTGACAGAGAAATTCTCATC
AAACCACCCAAAGAGGAAAAAACGGGCAAGCTGTGGCATTTGAATAAATG
TGTTTACAATTTAATGATTGGTGGTTTaacttattttgaatttgatgcaC
CTTTCAAGTACGTGGGATTAAATGTTGACATAAGAAAGTATGCAATCATC
ATCAACCAGAGTAATTACATTCAACACATtgaagaaatcaaaatttca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018589-exon-sc0000301-1491911889:183623..185920 | TCONS_00018589-exon-sc0000301-1491911889:183623..185920 | Clytia hemisphaerica | exon |
| TCONS_00018589-exon-sc0000301-1510915933:183623..185920 | TCONS_00018589-exon-sc0000301-1510915933:183623..185920 | Clytia hemisphaerica | exon |
| TCONS_00018589-exon-sc0000301-1575043694:183623..185920 | TCONS_00018589-exon-sc0000301-1575043694:183623..185920 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:183623..185920 . |
Blast
The following BLAST results are available for this feature:
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