TCONS_00018469 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018469
Unique NameTCONS_00018469
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4090

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018469 ID=TCONS_00018469|Name=TCONS_00018469|organism=Clytia hemisphaerica|type=transcript|length=4090bp
TAATAGCCGACATAAAAAGATCAGTGGATCGCTTCGATGTCAAGCTGTGA
CATTTTGTCATCGATCTCGCATCAGGAGAATGAAACTGGTTTAATAGCGA
AATTGTGATGAAGGAGAAAATCATATTTTGAACGTATAGAAAATCTCAAT
TTGTGACGGACTGGCCATCATTCTGGATGAGATATTTTGACTGTTTTGAT
TTCAGTTTCTAGGAGAGTGATTTTCTCTCAAGTTGGCAACGAGAAGAAAC
TACTAATTAAGAGGATTGGCTTGATACTTTAATAGGATTATACATTGAGT
GATGTTATCGTAAGATCCTTATCTCGCACAAAACTTTATTCACAAACATC
ACTTTTGTTAATTAATGCTTAGAAAGCAGGCTAGGATTCGACTGTTGAGA
GCACAAGGAGAATGGCTATACAGAGGTTTCTACTTCTACTACTGACGTTG
AATGTTTTGTTTCCAATTTGTTTCACCGATGATTCACATAACATGCATGA
AGAAGCAATGTCGGACGGTATTTCTCCTATCTTCATCACACCAGAGATGT
ATTTACACGCCCACTTGTTCCCGCGCGACGAGCAGAAGCGGCCGCAACCA
CAACGCTTTCATCCACATTACGAGCGCCCTGTGCAAGTAAACCTGACCAT
AGCTCTCATTTCAATCGTGGATATCGAACCTCAAAACGAAGTCATCATCA
TCAATGCCAACTTTGAACAGAGTTGGTTCAACCCTAGCATGAGTTGGGAT
CCGCACAATTTTGCTGGCATCAAAAAGATCAACGTTCGTTCAGGAATGAC
TTGGGTTCCCGATATTTTTGTCCACGCCAACGTGGAAAATGACAAGAAGT
ACAACGGTCTGATGGATAAAGTCAACACGTACGTCAAAGTCAATCACGAA
GGGCTCCATACGTGGAATGCCGCCGTCACTCTACGTATGGGTTGCGGAAT
GAACATTGAGAATTATCCTTTCGATACACAAAAATGTCCCTTAAGGTTCG
GCAGCTTGTCCATGGATGCTACGAGGATGAAATTGGTTCCGAAGCCAATC
AACCTGAAGTCTTATGGAGCAAGCCCTGAATGGATTTTCATCTCAATGGA
TCACGTGGGCGAAGAAAAGTCGTACCCAGGTTCCGACCATCCACATACCA
CAGCCGTCTACACCGTGGCCATGCGCAGAAAAGCACTTTACCCGATAACC
ATGCTCATCCTTCCAAATTTAATCTTAGCTGGTTTGACCATTCTCGTCTT
CTCCATCCCAACACCAACAGGCGAGCGAGCCATGTACATTTTCACTATCT
TTCTGGCGGTTGCTTGGTACATGACATCGAATATCGAAACAATGCCCAGC
AGTTCACAAACAATCCCCCTCTACACCAAATTTTTGGCTATCAATCTCAT
CAGTTTGTCCTTACTATGTATCAGCTTGTGCTTCACAATCGTGTGTTTTT
ACACGGATCCACAGATCAGTGACATGCCGGGATGGATCCGAGTCAACATT
CTCGGTCACGGTGCAAAGTTCTTCGGAATGGATGTCGATAAAAAAGTCTC
TGAGTGGAGAGAAGAGCTTTGTGAGGCGAGGCAGTACGACCACCTGCTCC
CTGAAGAATATGAGCCGGACCAGGAAGGGGAGGTTCAGGCTGAAGAAGGA
AACGAGAAGGCACCTGGTGATCTGTGGGTAGACTGTAGCAAGCCCGAAGC
TGGAGCTTTGATGAACATTTTCAACCCAGTTGAAATGAGACAAGTACATC
TGTTGATCGAAGATTATTTGCGAAGGCTGGAAGAGATCGAGGATTCAAAA
TGGGCGCAAAGAGAATGGGAACTCGTGGCGCAAATCCTGGACAAAGCCTT
TCTTTATGTTTTCTCCTCGGCCCTGACGTTAACAGTGGTTTCGTGTTCGA
TCCATATCCTGAACCTNTCTACTGCTATGGAATttcactgcatttcaaac
catacccccttggaatagaaatggactcctcaacagggggtgcacggttt
ttttctggaaaagcccattcctcgagggaattctattataatacaattga
aacaatcccacaatgtatcgctttttaagaaaaatcaaaaactccgataa
ggtctattcaaCGAAAATGCGATAGATTTACTGGAAACGTTTTCAACGAT
AGGTAAAACAGTTTCAAGGACCCGATGAAGAAGATTTTGGAAAGTCTTAG
AATAAGAGATATGACTAATTGATTTTTAGAATAACATTATTATTGATTCt
ctcggtcaaaatattaatttgTCTTATTATGGTTATATCTAATTGGAATT
ATTATTGATTCtctcggtcaaaatattaatttgTCTTATTATGGTTATAT
CTAATTGGAATTATTTCCTGAGTTGACAAACCGAATTCCCCAAAGTTGGC
GACTCGGCATCATTACTACGTCATTAATGAACAGTGCCCGGTCTTTTGAA
GATATTACATTTGACCTCAAGCTTCCTCTTGTTGTGTTGCAAAACCTACG
CCAATAAAACTCATTAAGGAAACCGAAGCTTATCTCGAAAagaattattc
gaattagaatttacaaatattttttgtgttgGAACGTTTCCACAGGGGAA
TGTAGACAACTCAAACTCTTAATACATAACTCTCTTAGAAAATTTTCCCA
TCCATCGAGCTCTCTATGAATAATTTGTGACGTCATCTTCAGTTTTCAGC
AACGTCTTCTCTTTGACTTAtctaaaaaatgaattaaaataaaaactatc
tattttatttaaaaatctaaaattctcATAAAAGTATCTAATAAAGACTT
TCAAGAAAAAactatctttgaaaaaattcctaCAAATTTACTATTTTCTC
CGTAAAAATATTACAACCGCGTAAAATGAGATCAGTTTAGCCTCTTCTTC
ATGGAGGGACGGGGGAGAGCGGGAGGAGAGGAGCAGGAGGTTGCTCTTCA
CCGTAGTGATTATTACTTCCATTGTTATTTTCGTTGTTTAGCGGAAGTGG
TGGTTTAATATTAAACGGTTTGCTCTCTTCCGTTGTGTTTCCGGTGGCTG
AGGGAGTTCCGGTTGTCCCACTCGAGCCACCGCCGTGAGCAAAATTAATA
TGAAGTTGCATTTTGTCTTTTCTTACAAAACCTTTGTTGCATTCGGGGCA
TTTAAGTGGAAGTTCGTTATTAGGTAAATGAGTGTACATGTGTCGGTTCA
AATCCCCTTTCCAGCGATAACGTCTTTGACAAATATTACACCCGaatggt
ttttcatttttatgtgcTAATAAATGCTGTTTTAATCCCGTTCCCGATCG
GTACTCTTTCCCGCATAGATAACAAAAGAAAGTCTTTTTATGAGTCGGCA
TATTCTCTTCGTACACTCCGTGAGTGTTGTGAGTATTGTGAGGAGAAGCA
GAATTGCGACGAACAGAATAAGTTGACACAACTTGTAGTTCGTGTGGATC
CCGATGTCCGGTGTTCGGGGATAAAGCGGAAGGGAGCCGATAATTCAGTG
ACCCGTACAAGTCTCTAGTGGCCGCTAACGGCTTTTCCATACTCATTGGA
AAACCACGATGTTCGGGAGGGACGTGCGTGGGAAGCCCTTCTAAGCGCGT
GAAGGGGTTATAAAGGTGATCGGCTTCTCGTCTATCCTCGCGCTCtcttt
ctctttctctctcACGTTCAACGGTAGTTGTGATTTCTTGCTTGATTTGA
GTGGCGCGTTCATGATCCATGTACTGTGGCTCGGGCGGCTCTTCATCGTT
CGTGCTGGGCGTTTGTAAGGGTGGAGGTGGTGGTAAATGCTCGTTTGGTT
CACTAGTGGGCGGTAATGGGCGGGGTTGGCGTTGCTTCAAGATTTTCATC
CTTTTATGTCCGAGGATGGAGATTTTTTCGCTGTCCAAATACATATCCTC
TGTCCGATCTACGTCCGAATTTTCTTCGTCGTTGTATGTATCGAAATTGA
CGCTGGACGAATTATCTTGTTCCGTGTTACGTTCATGTTTGTCGGAGTTT
GACGGCGCAACCACTTGAAGTTCTTCACGAGATTCAGAGTCTGACGTCAA
CACGTAAACCTGCGGTGTCTGGTCACACGGTGAATCAATC
Run BLAST on NCBI

protein sequence of TCONS_00018469-protein

>TCONS_00018469-protein ID=TCONS_00018469-protein|Name=TCONS_00018469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=518bp
MAIQRFLLLLLTLNVLFPICFTDDSHNMHEEAMSDGISPIFITPEMYLHA
HLFPRDEQKRPQPQRFHPHYERPVQVNLTIALISIVDIEPQNEVIIINAN
FEQSWFNPSMSWDPHNFAGIKKINVRSGMTWVPDIFVHANVENDKKYNGL
MDKVNTYVKVNHEGLHTWNAAVTLRMGCGMNIENYPFDTQKCPLRFGSLS
MDATRMKLVPKPINLKSYGASPEWIFISMDHVGEEKSYPGSDHPHTTAVY
TVAMRRKALYPITMLILPNLILAGLTILVFSIPTPTGERAMYIFTIFLAV
AWYMTSNIETMPSSSQTIPLYTKFLAINLISLSLLCISLCFTIVCFYTDP
QISDMPGWIRVNILGHGAKFFGMDVDKKVSEWREELCEARQYDHLLPEEY
EPDQEGEVQAEEGNEKAPGDLWVDCSKPEAGALMNIFNPVEMRQVHLLIE
DYLRRLEEIEDSKWAQREWELVAQILDKAFLYVFSSALTLTVVSCSIHIL
NXSTAMEFHCISNHTPLE
Run BLAST on NCBI

transcript from alignment at sc0000300:122493..129729-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018469 ID=TCONS_00018469|Name=TCONS_00018469|organism=Clytia hemisphaerica|type=transcript|length=7237bp|location=Sequence derived from alignment at sc0000300:122493..129729- (Clytia hemisphaerica)
TAATAGCCGACATAAAAAGATCAGTGGATCGCTTCGATGTCAAGCTGTGA
CATTTTGTCATCGATCTCGCATCAGGAGAATGAAACTGGTTTAATAGCGA
AATTGTGATGAAGGAGAAAATCATATTTTGAACGTATAGAAAATCTCAAT
TTGTGACGGACTGGCCATCATTCTGGATGAGATATTTTGACTGTTTTGAT
TTCAGTTTCTAGGAGAGTGATTTTCTCTCAAGTTGGCAACGAGAAGAAAC
TACTAATTAAGAGGATTGGCTTGATACTTTAATAGGATTATACATTGAGT
GATGTTATCGTAAGATCCTTATCTCGCACAAAACTTTATTCACAAACATC
ACTTTTGTTAATTAATGCTTAGAAAGCAGGCTAGGATTCGACTGTTGAGA
GCACAAGGAGAATGGCTATACAGAGGTTTCTACTTCTACTACTGACGTTG
AATGTTTTGTTTCCAATTTGTTTCACCGATGATTCACATAACATGCATGA
AGAAGCAATGTCGGACGGTATTTGTAAGTATCAAGACTTACAAATTAACT
TTTTCGTCTTTTTTACTCAAGAACTTACCAGAAAACATCCCTGACTGATC
CCCAACACGAGTAGGTGGGACTCCCTCCTCACTCCCGTCCTCACTTCAAT
AGTTATCCTGAAAATCAACTTAAAATCTCACTGGTTAATAATTTCTCACT
AAACAGCGAAATTGTGATTATAAAGAAAACAATTTTGAGCGTTCTTGAAA
ATCATCAGGAAGAAATACTATACAAGATTGAATTGTTCTCTTTCCAGCTC
CTATCTTCATCACACCAGAGATGTATTTACACGCCCACTTGTTCCCGCGC
GACGAGCAGAAGCGGCCGCAACCACAACGCTTTCATCCACATTACGAGCG
CCCTGTGCAAGTAAACCTGACCATAGCTCTCATTTCAATCGTGGATATCG
AACCTCAAAACGAAGTCATCATCATCAATGCCAACTTTGAACAGGTACTT
CAAGAAAGAAGCATATTGTGAAAAATCTAAACAGTTTTCTTTAATGTCTC
GACTTGCTGTCTTTGGAAGCTCTTCAATCCAACCTCAGAACAATCGATAT
CACTCCTACTAAATGATAATGAGGATTTGTCGGTGTCTCGATGGCTTGAA
CGAAGAGCTTCCAAATTAAAATTGTTTTGAAATAACAGAAAATAAGACAA
GAGTAAAAGGAACCTAAACGTTCTTACTCAAACAACTTTTTTCCTCCACA
GAGTTGGTTCAACCCTAGCATGAGTTGGGATCCGCACAATTTTGCTGGCA
TCAAAAAGATCAACGTTCGTTCAGGAATGACTTGGGTTCCCGATATTTTT
GTCCACGCCAAGTAAGAAAATAGCATCTCGTTTGACATCTAGTAACCCGT
CTAAATGTACTGTACACCCCTGTATCCGCACATTTCAGCCAGTTTTTCGT
AATCTTAGTTTCCAAAATGGGGAAAAAGTTTTAACTGTTTTGAACTTGAC
GAATTCTTTGTTCCTCTTGTCAAGAACTAGGGTTGTTGACAGATAAAGCG
TGGATTCTATACAGTAGATTTAAAGATCACTCATCCCAATTGTTTTCCAT
GATTCACCAAACAGCGTGGAAAATGACAAGAAGTACAACGGTCTGATGGA
TAAAGTCAACACGTACGTCAAAGTCAATCACGAAGGGCTCCATACGTGGA
ATGCCGCCGTCACTCTACGTATGGGTTGCGGAATGAACATTGAGAATTAT
CCTTTCGATACACAAAAATGTCCCTTAAGGTTCGGCAGCTTGTCCATGGA
TGCTACGAGGATGAAATTGGTTCCGAAGCCAATCAACCTGAAGTCTTATG
GAGGTAAGTGAGAGCTTTCGGGATTTTTTCTTCTTCTTTTTCGTGCTGGT
TGACAAGGAAACAAAGATTGGAGATATCACCCTTCTGTACAAATTTTAAA
CCTCTCTTCACGAGGAGGCGTTAAGCTTTCTTTTGAAAAGAAATCAGAGC
TTTATGGAATATTTGGAATATATGGAAAGTGGCATCTTTATCATACATTT
TTAGCAAGCCCTGAATGGATTTTCATCTCAATGGATCACGTGGGCGAAGA
AAAGTCGTACCCAGGTTCCGACCATCCACATACCACAGCCGTCTACACCG
TGGCCATGCGCAGAAAAGCACTTTACCCGATAACCATGCTCATCCTTCCA
AATTTAATCTTAGCTGGTTTGACCATTCTCGTCTTCTCCATCCCAACACC
AACAGGTAGTCATTCTTTATACATTATTCTTCTTCGTAAGCGTATGGTAG
TTTGAACATTTACAACGCAGATCAAAACAATTATTCTCCGAAATCAATTC
ATCAACAAACCTCACTCAGAACAAGTAAAAAGAAGCACACATTATTTGAA
TTAAATACATTACTTATTTGATTTCAGGCGAGCGAGCCATGTACATTTTC
ACTATCTTTCTGGCGGTTGCTTGGTACATGACATCGAATATCGAAACAAT
GCCCAGCAGTTCACAAACAATCCCCCTCTACACCAAATTTTTGGCTATCA
ATCTCATCAGTTTGTCCTTACTATGTATCAGCTTGTGCTTCACAATCGTG
TGTTTTTACACGGATCCACAGATCAGTGACATGCCGGGATGGATCCGAGT
CAACATTCTCGGTCACGGTGCAAAGTTCTTCGGAATGGATGTCGATAAAA
AAGTCTCTGAGTGGAGAGAAGAGCTTTGTGAGGCGAGGCAGTACGACCAC
CTGCTCCCTGAAGAATATGAGCCGGACCAGGAAGGGGAGGTTCAGGCTGA
AGAAGGAAACGAGAAGGCACCTGGTGATCTGTGGGTAGACTGTAGCAAGC
CCGAAGCTGGAGCTTTGATGAACATTTTCAACCCAGTTGAAATGAGACAA
GTACATCTGTTGATCGAAGATTATTTGCGAAGGCTGGAAGAGATCGAGGA
TTCAAAATGGGCGCAAAGAGAATGGGAACTCGTGGCGCAAATCCTGGACA
AAGCCTTTCTTTATGTTTTCTCCTCGGCCCTGACGTTAACAGTGGTTTCG
TGTTCGATCCATATCCTGAACCTNTCTACTGCTATGGAATTTCACTGCAT
TTCAAACCATACCCCCTTGGAATAGAAATGGACTCCTCAACAGGGGGTGC
ACGGTTTTTTTCTGGAAAAGCCCATTCCTCGAGGGAATTCTATTATAATA
CAATTGAAACAATCCCACAATGTATCGCTTTTTAAGAAAAATCAAAAACT
CCGATAAGGTCTATTCAACGAAAATGCGATAGATTTACTGGAAACGTTTT
CAACGATAGGTAAAACAGTTTCAAGGACCCGATGAAGAAGATTTTGGAAA
GTCTTAGAATAAGAGATATGACTAATTGATTTTTAGAATAACATTATTAT
TGATTCTCTCGGTCAAAATATTAATTTGTCTTATTATGGTTATATCTAAT
TGGAATTATTTCCTGAGTTGACAAACCGAATTCCCCAAAGTTGGCGACTC
GGCATCATTACTACGTCATTAATGAACAGTGCCCGGTCTTTTGAAGATAT
TACATTTGACCTCAAGCTTCCTCTTGTTGTGTTGCAAAACCTACGCCAAT
AAAACTCATTAAGGAAACCGAAGCTTATCTCGAAAAGAATTATTCGAATT
AGAATTTACAAATATTTTTTGTGTTGGAACGTTTCCACAGGGGAATGTAG
ACAACTCAAACTCTTAATACATAACTCTCTTAGAAAATTTTCCCATCCAT
CGAGCTCTCTATGAATAATTTGTGACGTCATCTTCAGTTTTCAGCAACGT
CTTCTCTTTGACTTATCTAAAAAATGAATTAAAATAAAAACTATCTATTT
TATTTAAAAATCTAAAATTCTCATAAAAGTATCTAATAAAGACTTTCAAG
AAAAAACTATCTTTGAAAAAATTCCTACAAATTTACTATTTTCTCCGTAA
AAATATTACAACCGCGTAAAATGAGATCAGTTTAGCCTCTTCTTCATGGA
GGGACGGGGGAGAGCGGGAGGAGAGGAGCAGGAGGTTGCTCTTCACCGTA
GTGATTATTACTTCCATTGTTATTTTCGTTGTTTAGCGGAAGTGGTGGTT
TAATATTAAACGGTTTGCTCTCTTCCGTTGTGTTTCCGGTGGCTGAGGGA
GTTCCGGTTGTCCCACTCGAGCCACCGCCGTGAGCAAAATTAATATGAAG
TTGCATTTTGTCTTTTCTTACAAAACCTTTGTTGCATTCGGGGCATTTAA
GTGGAAGTTCGTTATTAGGTAAATGAGTGTACATGTGTCGGTTCAAATCC
CCTTTCCAGCGATAACGTCTTTGGCAAATATTACACCCGAATGGTTTTTC
ATTTTTATGCGCTAATAAATGCTGTTTTAATCCCGTTCCCGATCGGTACT
CTTTCCCGCATAGATAACAAAAGAAAGTCTTTTTATGAGTCGGCATATTC
TCTTCGTACACTCCGTGAGTGTTGTGAGTATTGTGAGGAGAAGCAGAATT
GCGACGAACAGAATAAGTTGACACAACTTGTAGTTCGTGTGGATCCCGAT
GTCCGGTGTTCGGGGATAAAGCGGAAGGGAGCCGATAATTCGGTGACCCG
TACAAGTCTCTAGTGGCCGCTAACGGCTTTTCCATACTCATTGGAAAACC
ACGATGTTCGGGAGGGACGTGCGTGGGAAGCCCTTCTAAGCGCGTGAAGG
GGTTATAAAGGTGATCGGCTTCTCGTCTATCCTCGCGCTCTCTTTCTCTT
TCTCTCTCACGTTCAACGGTAGTTGTGATTTCTTGCTTGATTTGAGTGGC
GCGTTCATGATCCATGTACTGTGGCTCGGGCGGCTCTTCATCGTTCGTGC
CGGGCGTTTGTAAGGGTGGAGGTGGTGGTAAATGCTCGTTTGGTTCACTA
GTGGGCGGTAATGGGCGGGGTTGGCGTTGCTTCAAGATTTTCATCCTTTT
ATGTCCGAGGATAGAGATTTTTTCGCTGTCCAAATACATATCCTCTGTCC
GATCTACGTCCGAATTTTCTTCGTCGTTGTATGTATCGAAATTGACGCTG
GACGAATTATCTTGTTCCGTGTTACGTTCATGTTTGTCGGAGTTTGACGG
CGCAACCACTTGAAGTTCTTCACGANTCTACTGCTATGGAATTTCACTGC
ATTTCAAACCATACCCCCTTGGAATAGAAATGGACTCCTCAACAGGGGGT
GCACGGTTTTTTTCTGGAAAAGCCCATTCCTCGAGGGAATTCTATTATAA
TACAATTGAAACAATCCCACAATGTATCGCTTTTTAAGAAAAATCAAAAA
CTCCGATAAGGTCTATTCAACGAAAATGCGATAGATTTACTGGAAACGTT
TTCAACGATAGGTAAAACAGTTTCAAGGACCCGATGAAGAAGATTTTGGA
AAGTCTTAGAATAAGAGATATGACTAATTGATTTTTAGAATAACATTATT
ATTGATTCTCTCGGTCAAAATATTAATTTGTCTTATTATGGTTATATCTA
ATTGGAATTATTTCCTGAGTTGACAAACCGAATTCCCCAAAGTTGGCGAC
TCGGCATCATTACTACGTCATTAATGAACAGTGCCCGGTCTTTTGAAGAT
ATTACATTTGACCTCAAGCTTCCTCTTGTTGTGTTGCAAAACCTACGCCA
ATAAAACTCATTAAGGAAACCGAAGCTTATCTCGAAAAGAATTATTCGAA
TTAGAATTTACAAATATTTTTTGTGTTGGAACGTTTCCACAGGGGAATGT
AGACAACTCAAACTCTTAATACATAACTCTCTTAGAAAATTTTCCCATCC
ATCGAGCTCTCTATGAATAATTTGTGACGTCATCTTCAGTTTTCAGCAAC
GTCTTCTCTTTGACTTATCTAAAAAATGAATTAAAATAAAAACTATCTAT
TTTATTTAAAAATCTAAAATTCTCATAAAAGTATCTAATAAAGACTTTCA
AGAAAAAACTATCTTTGAAAAAATTCCTACAAATTTACTATTTTCTCCGT
AAAAATATTACAACCGCGTAAAATGAGATCAGTTTAGCCTCTTCTTCATG
GAGGGACGGGGGAGAGCGGGAGGAGAGGAGCAGGAGGTTGCTCTTCACCG
TAGTGATTATTACTTCCATTGTTATTTTCGTTGTTTAGCGGAAGTGGTGG
TTTAATATTAAACGGTTTGCTCTCTTCCGTTGTGTTTCCGGTGGCTGAGG
GAGTTCCGGTTGTCCCACTCGAGCCACCGCCGTGAGCAAAATTAATATGA
AGTTGCATTTTGTCTTTTCTTACAAAACCTTTGTTGCATTCGGGGCATTT
AAGTGGAAGTTCGTTATTAGGTAAATGAGTGTACATGTGTCGGTTCAAAT
CCCCTTTCCAGCGATAACGTCTTTGACAAATATTACACCCGAATGGTTTT
TCATTTTTATGTGCTAATAAATGCTGTTTTAATCCCGTTCCCGATCGGTA
CTCTTTCCCGCATAGATAACAAAAGAAAGTCTTTTTATGAGTCGGCATAT
TCTCTTCGTACACTCCGTGAGTGTTGTGAGTATTGTGAGGAGAAGCAGAA
TTGCGACGAACAGAATAAGTTGACACAACTTGTAGTTCGTGTGGATCCCG
ATGTCCGGTGTTCGGGGATAAAGCGGAAGGGAGCCGATAATTCAGTGACC
CGTACAAGTCTCTAGTGGCCGCTAACGGCTTTTCCATACTCATTGGAAAA
CCACGATGTTCGGGAGGGACGTGCGTGGGAAGCCCTTCTAAGCGCGTGAA
GGGGTTATAAAGGTGATCGGCTTCTCGTCTATCCTCGCGCTCTCTTTCTC
TTTCTCTCTCACGTTCAACGGTAGTTGTGATTTCTTGCTTGATTTGAGTG
GCGCGTTCATGATCCATGTACTGTGGCTCGGGCGGCTCTTCATCGTTCGT
GCTGGGCGTTTGTAAGGGTGGAGGTGGTGGTAAATGCTCGTTTGGTTCAC
TAGTGGGCGGTAATGGGCGGGGTTGGCGTTGCTTCAAGATTTTCATCCTT
TTATGTCCGAGGATGGAGATTTTTTCGCTGTCCAAATACATATCCTCTGT
CCGATCTACGTCCGAATTTTCTTCGTCGTTGTATGTATCGAAATTGACGC
TGGACGAATTATCTTGTTCCGTGTTACGTTCATGTTTGTCGGAGTTTGAC
GGCGCAACCACTTGAAGTTCTTCACGAGATTCAGAGTCTGACGTCAACAC
GTAAACCTGCGGTGTCTGGTCACACGGTGAATCAATC

Coding sequence (CDS) from alignment at sc0000300:122493..129729-

>TCONS_00018469 ID=TCONS_00018469|Name=TCONS_00018469|organism=Clytia hemisphaerica|type=CDS|length=9342bp|location=Sequence derived from alignment at sc0000300:122493..129729- (Clytia hemisphaerica)
GCGAGCGAGCCATGTACATTTTCACTATCTTTCTGGCGGTTGCTTGGTAC
ATGACATCGAATATCGAAACAATGCCCAGCAGTTCACAAACAATCCCCCT
CTACACCAAATTTTTGGCTATCAATCTCATCAGTTTGTCCTTACTATGTA
TCAGCTTGTGCTTCACAATCGTGTGTTTTTACACGGATCCACAGATCAGT
GACATGCCGGGATGGATCCGAGTCAACATTCTCGGTCACGGTGCAAAGTT
CTTCGGAATGGATGTCGATAAAAAAGTCTCTGAGTGGAGAGAAGAGCTTT
GTGAGGCGAGGCAGTACGACCACCTGCTCCCTGAAGAATATGAGCCGGAC
CAGGAAGGGGAGGTTCAGGCTGAAGAAGGAAACGAGAAGGCACCTGGTGA
TCTGTGGGTAGACTGTAGCAAGCCCGAAGCTGGAGCTTTGATGAACATTT
TCAACCCAGTTGAAATGAGACAAGTACATCTGTTGATCGAAGATTATTTG
CGAAGGCTGGAAGAGATCGAGGATTCAAAATGGGCGCAAAGAGAATGGGA
ACTCGTGGCGCAAATCCTGGACAAAGCCTTTCTTTATGTTTTCTCCTCGG
CCCTGACGTTAACAGTGGTTTCGTGTTCGATCCATATCCTGAACCTNTCT
ACTGCTATGGAATTTCACTGCATTTCAAACCATACCCCCTTGGAATAGCA
AGCCCTGAATGGATTTTCATCTCAATGGATCACGTGGGCGAAGAAAAGTC
GTACCCAGGTTCCGACCATCCACATACCACAGCCGTCTACACCGTGGCCA
TGCGCAGAAAAGCACTTTACCCGATAACCATGCTCATCCTTCCAAATTTA
ATCTTAGCTGGTTTGACCATTCTCGTCTTCTCCATCCCAACACCAACAGC
GTGGAAAATGACAAGAAGTACAACGGTCTGATGGATAAAGTCAACACGTA
CGTCAAAGTCAATCACGAAGGGCTCCATACGTGGAATGCCGCCGTCACTC
TACGTATGGGTTGCGGAATGAACATTGAGAATTATCCTTTCGATACACAA
AAATGTCCCTTAAGGTTCGGCAGCTTGTCCATGGATGCTACGAGGATGAA
ATTGGTTCCGAAGCCAATCAACCTGAAGTCTTATGGAGAGTTGGTTCAAC
CCTAGCATGAGTTGGGATCCGCACAATTTTGCTGGCATCAAAAAGATCAA
CGTTCGTTCAGGAATGACTTGGGTTCCCGATATTTTTGTCCACGCCAACT
CCTATCTTCATCACACCAGAGATGTATTTACACGCCCACTTGTTCCCGCG
CGACGAGCAGAAGCGGCCGCAACCACAACGCTTTCATCCACATTACGAGC
GCCCTGTGCAAGTAAACCTGACCATAGCTCTCATTTCAATCGTGGATATC
GAACCTCAAAACGAAGTCATCATCATCAATGCCAACTTTGAACAGATGGC
TATACAGAGGTTTCTACTTCTACTACTGACGTTGAATGTTTTGTTTCCAA
TTTGTTTCACCGATGATTCACATAACATGCATGAAGAAGCAATGTCGGAC
GGTATTTGCGAGCGAGCCATGTACATTTTCACTATCTTTCTGGCGGTTGC
TTGGTACATGACATCGAATATCGAAACAATGCCCAGCAGTTCACAAACAA
TCCCCCTCTACACCAAATTTTTGGCTATCAATCTCATCAGTTTGTCCTTA
CTATGTATCAGCTTGTGCTTCACAATCGTGTGTTTTTACACGGATCCACA
GATCAGTGACATGCCGGGATGGATCCGAGTCAACATTCTCGGTCACGGTG
CAAAGTTCTTCGGAATGGATGTCGATAAAAAAGTCTCTGAGTGGAGAGAA
GAGCTTTGTGAGGCGAGGCAGTACGACCACCTGCTCCCTGAAGAATATGA
GCCGGACCAGGAAGGGGAGGTTCAGGCTGAAGAAGGAAACGAGAAGGCAC
CTGGTGATCTGTGGGTAGACTGTAGCAAGCCCGAAGCTGGAGCTTTGATG
AACATTTTCAACCCAGTTGAAATGAGACAAGTACATCTGTTGATCGAAGA
TTATTTGCGAAGGCTGGAAGAGATCGAGGATTCAAAATGGGCGCAAAGAG
AATGGGAACTCGTGGCGCAAATCCTGGACAAAGCCTTTCTTTATGTTTTC
TCCTCGGCCCTGACGTTAACAGTGGTTTCGTGTTCGATCCATATCCTGAA
CCTNTCTACTGCTATGGAATTTCACTGCATTTCAAACCATACCCCCTTGG
AATAGCAAGCCCTGAATGGATTTTCATCTCAATGGATCACGTGGGCGAAG
AAAAGTCGTACCCAGGTTCCGACCATCCACATACCACAGCCGTCTACACC
GTGGCCATGCGCAGAAAAGCACTTTACCCGATAACCATGCTCATCCTTCC
AAATTTAATCTTAGCTGGTTTGACCATTCTCGTCTTCTCCATCCCAACAC
CAACAGCGTGGAAAATGACAAGAAGTACAACGGTCTGATGGATAAAGTCA
ACACGTACGTCAAAGTCAATCACGAAGGGCTCCATACGTGGAATGCCGCC
GTCACTCTACGTATGGGTTGCGGAATGAACATTGAGAATTATCCTTTCGA
TACACAAAAATGTCCCTTAAGGTTCGGCAGCTTGTCCATGGATGCTACGA
GGATGAAATTGGTTCCGAAGCCAATCAACCTGAAGTCTTATGGAGAGTTG
GTTCAACCCTAGCATGAGTTGGGATCCGCACAATTTTGCTGGCATCAAAA
AGATCAACGTTCGTTCAGGAATGACTTGGGTTCCCGATATTTTTGTCCAC
GCCAACTCCTATCTTCATCACACCAGAGATGTATTTACACGCCCACTTGT
TCCCGCGCGACGAGCAGAAGCGGCCGCAACCACAACGCTTTCATCCACAT
TACGAGCGCCCTGTGCAAGTAAACCTGACCATAGCTCTCATTTCAATCGT
GGATATCGAACCTCAAAACGAAGTCATCATCATCAATGCCAACTTTGAAC
AGATGGCTATACAGAGGTTTCTACTTCTACTACTGACGTTGAATGTTTTG
TTTCCAATTTGTTTCACCGATGATTCACATAACATGCATGAAGAAGCAAT
GTCGGACGGTATTTGCGAGCGAGCCATGTACATTTTCACTATCTTTCTGG
CGGTTGCTTGGTACATGACATCGAATATCGAAACAATGCCCAGCAGTTCA
CAAACAATCCCCCTCTACACCAAATTTTTGGCTATCAATCTCATCAGTTT
GTCCTTACTATGTATCAGCTTGTGCTTCACAATCGTGTGTTTTTACACGG
ATCCACAGATCAGTGACATGCCGGGATGGATCCGAGTCAACATTCTCGGT
CACGGTGCAAAGTTCTTCGGAATGGATGTCGATAAAAAAGTCTCTGAGTG
GAGAGAAGAGCTTTGTGAGGCGAGGCAGTACGACCACCTGCTCCCTGAAG
AATATGAGCCGGACCAGGAAGGGGAGGTTCAGGCTGAAGAAGGAAACGAG
AAGGCACCTGGTGATCTGTGGGTAGACTGTAGCAAGCCCGAAGCTGGAGC
TTTGATGAACATTTTCAACCCAGTTGAAATGAGACAAGTACATCTGTTGA
TCGAAGATTATTTGCGAAGGCTGGAAGAGATCGAGGATTCAAAATGGGCG
CAAAGAGAATGGGAACTCGTGGCGCAAATCCTGGACAAAGCCTTTCTTTA
TGTTTTCTCCTCGGCCCTGACGTTAACAGTGGTTTCGTGTTCGATCCATA
TCCTGAACCTNTCTACTGCTATGGAATTTCACTGCATTTCAAACCATACC
CCCTTGGAATAGCAAGCCCTGAATGGATTTTCATCTCAATGGATCACGTG
GGCGAAGAAAAGTCGTACCCAGGTTCCGACCATCCACATACCACAGCCGT
CTACACCGTGGCCATGCGCAGAAAAGCACTTTACCCGATAACCATGCTCA
TCCTTCCAAATTTAATCTTAGCTGGTTTGACCATTCTCGTCTTCTCCATC
CCAACACCAACAGCGTGGAAAATGACAAGAAGTACAACGGTCTGATGGAT
AAAGTCAACACGTACGTCAAAGTCAATCACGAAGGGCTCCATACGTGGAA
TGCCGCCGTCACTCTACGTATGGGTTGCGGAATGAACATTGAGAATTATC
CTTTCGATACACAAAAATGTCCCTTAAGGTTCGGCAGCTTGTCCATGGAT
GCTACGAGGATGAAATTGGTTCCGAAGCCAATCAACCTGAAGTCTTATGG
AGAGTTGGTTCAACCCTAGCATGAGTTGGGATCCGCACAATTTTGCTGGC
ATCAAAAAGATCAACGTTCGTTCAGGAATGACTTGGGTTCCCGATATTTT
TGTCCACGCCAACTCCTATCTTCATCACACCAGAGATGTATTTACACGCC
CACTTGTTCCCGCGCGACGAGCAGAAGCGGCCGCAACCACAACGCTTTCA
TCCACATTACGAGCGCCCTGTGCAAGTAAACCTGACCATAGCTCTCATTT
CAATCGTGGATATCGAACCTCAAAACGAAGTCATCATCATCAATGCCAAC
TTTGAACAGATGGCTATACAGAGGTTTCTACTTCTACTACTGACGTTGAA
TGTTTTGTTTCCAATTTGTTTCACCGATGATTCACATAACATGCATGAAG
AAGCAATGTCGGACGGTATTTGCGAGCGAGCCATGTACATTTTCACTATC
TTTCTGGCGGTTGCTTGGTACATGACATCGAATATCGAAACAATGCCCAG
CAGTTCACAAACAATCCCCCTCTACACCAAATTTTTGGCTATCAATCTCA
TCAGTTTGTCCTTACTATGTATCAGCTTGTGCTTCACAATCGTGTGTTTT
TACACGGATCCACAGATCAGTGACATGCCGGGATGGATCCGAGTCAACAT
TCTCGGTCACGGTGCAAAGTTCTTCGGAATGGATGTCGATAAAAAAGTCT
CTGAGTGGAGAGAAGAGCTTTGTGAGGCGAGGCAGTACGACCACCTGCTC
CCTGAAGAATATGAGCCGGACCAGGAAGGGGAGGTTCAGGCTGAAGAAGG
AAACGAGAAGGCACCTGGTGATCTGTGGGTAGACTGTAGCAAGCCCGAAG
CTGGAGCTTTGATGAACATTTTCAACCCAGTTGAAATGAGACAAGTACAT
CTGTTGATCGAAGATTATTTGCGAAGGCTGGAAGAGATCGAGGATTCAAA
ATGGGCGCAAAGAGAATGGGAACTCGTGGCGCAAATCCTGGACAAAGCCT
TTCTTTATGTTTTCTCCTCGGCCCTGACGTTAACAGTGGTTTCGTGTTCG
ATCCATATCCTGAACCTNTCTACTGCTATGGAATTTCACTGCATTTCAAA
CCATACCCCCTTGGAATAGCAAGCCCTGAATGGATTTTCATCTCAATGGA
TCACGTGGGCGAAGAAAAGTCGTACCCAGGTTCCGACCATCCACATACCA
CAGCCGTCTACACCGTGGCCATGCGCAGAAAAGCACTTTACCCGATAACC
ATGCTCATCCTTCCAAATTTAATCTTAGCTGGTTTGACCATTCTCGTCTT
CTCCATCCCAACACCAACAGCGTGGAAAATGACAAGAAGTACAACGGTCT
GATGGATAAAGTCAACACGTACGTCAAAGTCAATCACGAAGGGCTCCATA
CGTGGAATGCCGCCGTCACTCTACGTATGGGTTGCGGAATGAACATTGAG
AATTATCCTTTCGATACACAAAAATGTCCCTTAAGGTTCGGCAGCTTGTC
CATGGATGCTACGAGGATGAAATTGGTTCCGAAGCCAATCAACCTGAAGT
CTTATGGAGAGTTGGTTCAACCCTAGCATGAGTTGGGATCCGCACAATTT
TGCTGGCATCAAAAAGATCAACGTTCGTTCAGGAATGACTTGGGTTCCCG
ATATTTTTGTCCACGCCAACTCCTATCTTCATCACACCAGAGATGTATTT
ACACGCCCACTTGTTCCCGCGCGACGAGCAGAAGCGGCCGCAACCACAAC
GCTTTCATCCACATTACGAGCGCCCTGTGCAAGTAAACCTGACCATAGCT
CTCATTTCAATCGTGGATATCGAACCTCAAAACGAAGTCATCATCATCAA
TGCCAACTTTGAACAGATGGCTATACAGAGGTTTCTACTTCTACTACTGA
CGTTGAATGTTTTGTTTCCAATTTGTTTCACCGATGATTCACATAACATG
CATGAAGAAGCAATGTCGGACGGTATTTGCGAGCGAGCCATGTACATTTT
CACTATCTTTCTGGCGGTTGCTTGGTACATGACATCGAATATCGAAACAA
TGCCCAGCAGTTCACAAACAATCCCCCTCTACACCAAATTTTTGGCTATC
AATCTCATCAGTTTGTCCTTACTATGTATCAGCTTGTGCTTCACAATCGT
GTGTTTTTACACGGATCCACAGATCAGTGACATGCCGGGATGGATCCGAG
TCAACATTCTCGGTCACGGTGCAAAGTTCTTCGGAATGGATGTCGATAAA
AAAGTCTCTGAGTGGAGAGAAGAGCTTTGTGAGGCGAGGCAGTACGACCA
CCTGCTCCCTGAAGAATATGAGCCGGACCAGGAAGGGGAGGTTCAGGCTG
AAGAAGGAAACGAGAAGGCACCTGGTGATCTGTGGGTAGACTGTAGCAAG
CCCGAAGCTGGAGCTTTGATGAACATTTTCAACCCAGTTGAAATGAGACA
AGTACATCTGTTGATCGAAGATTATTTGCGAAGGCTGGAAGAGATCGAGG
ATTCAAAATGGGCGCAAAGAGAATGGGAACTCGTGGCGCAAATCCTGGAC
AAAGCCTTTCTTTATGTTTTCTCCTCGGCCCTGACGTTAACAGTGGTTTC
GTGTTCGATCCATATCCTGAACCTNTCTACTGCTATGGAATTTCACTGCA
TTTCAAACCATACCCCCTTGGAATAGCAAGCCCTGAATGGATTTTCATCT
CAATGGATCACGTGGGCGAAGAAAAGTCGTACCCAGGTTCCGACCATCCA
CATACCACAGCCGTCTACACCGTGGCCATGCGCAGAAAAGCACTTTACCC
GATAACCATGCTCATCCTTCCAAATTTAATCTTAGCTGGTTTGACCATTC
TCGTCTTCTCCATCCCAACACCAACAGCGTGGAAAATGACAAGAAGTACA
ACGGTCTGATGGATAAAGTCAACACGTACGTCAAAGTCAATCACGAAGGG
CTCCATACGTGGAATGCCGCCGTCACTCTACGTATGGGTTGCGGAATGAA
CATTGAGAATTATCCTTTCGATACACAAAAATGTCCCTTAAGGTTCGGCA
GCTTGTCCATGGATGCTACGAGGATGAAATTGGTTCCGAAGCCAATCAAC
CTGAAGTCTTATGGAGAGTTGGTTCAACCCTAGCATGAGTTGGGATCCGC
ACAATTTTGCTGGCATCAAAAAGATCAACGTTCGTTCAGGAATGACTTGG
GTTCCCGATATTTTTGTCCACGCCAACTCCTATCTTCATCACACCAGAGA
TGTATTTACACGCCCACTTGTTCCCGCGCGACGAGCAGAAGCGGCCGCAA
CCACAACGCTTTCATCCACATTACGAGCGCCCTGTGCAAGTAAACCTGAC
CATAGCTCTCATTTCAATCGTGGATATCGAACCTCAAAACGAAGTCATCA
TCATCAATGCCAACTTTGAACAGATGGCTATACAGAGGTTTCTACTTCTA
CTACTGACGTTGAATGTTTTGTTTCCAATTTGTTTCACCGATGATTCACA
TAACATGCATGAAGAAGCAATGTCGGACGGTATTTGCGAGCGAGCCATGT
ACATTTTCACTATCTTTCTGGCGGTTGCTTGGTACATGACATCGAATATC
GAAACAATGCCCAGCAGTTCACAAACAATCCCCCTCTACACCAAATTTTT
GGCTATCAATCTCATCAGTTTGTCCTTACTATGTATCAGCTTGTGCTTCA
CAATCGTGTGTTTTTACACGGATCCACAGATCAGTGACATGCCGGGATGG
ATCCGAGTCAACATTCTCGGTCACGGTGCAAAGTTCTTCGGAATGGATGT
CGATAAAAAAGTCTCTGAGTGGAGAGAAGAGCTTTGTGAGGCGAGGCAGT
ACGACCACCTGCTCCCTGAAGAATATGAGCCGGACCAGGAAGGGGAGGTT
CAGGCTGAAGAAGGAAACGAGAAGGCACCTGGTGATCTGTGGGTAGACTG
TAGCAAGCCCGAAGCTGGAGCTTTGATGAACATTTTCAACCCAGTTGAAA
TGAGACAAGTACATCTGTTGATCGAAGATTATTTGCGAAGGCTGGAAGAG
ATCGAGGATTCAAAATGGGCGCAAAGAGAATGGGAACTCGTGGCGCAAAT
CCTGGACAAAGCCTTTCTTTATGTTTTCTCCTCGGCCCTGACGTTAACAG
TGGTTTCGTGTTCGATCCATATCCTGAACCTNTCTACTGCTATGGAATTT
CACTGCATTTCAAACCATACCCCCTTGGAATAGCAAGCCCTGAATGGATT
TTCATCTCAATGGATCACGTGGGCGAAGAAAAGTCGTACCCAGGTTCCGA
CCATCCACATACCACAGCCGTCTACACCGTGGCCATGCGCAGAAAAGCAC
TTTACCCGATAACCATGCTCATCCTTCCAAATTTAATCTTAGCTGGTTTG
ACCATTCTCGTCTTCTCCATCCCAACACCAACAGCGTGGAAAATGACAAG
AAGTACAACGGTCTGATGGATAAAGTCAACACGTACGTCAAAGTCAATCA
CGAAGGGCTCCATACGTGGAATGCCGCCGTCACTCTACGTATGGGTTGCG
GAATGAACATTGAGAATTATCCTTTCGATACACAAAAATGTCCCTTAAGG
TTCGGCAGCTTGTCCATGGATGCTACGAGGATGAAATTGGTTCCGAAGCC
AATCAACCTGAAGTCTTATGGAGAGTTGGTTCAACCCTAGCATGAGTTGG
GATCCGCACAATTTTGCTGGCATCAAAAAGATCAACGTTCGTTCAGGAAT
GACTTGGGTTCCCGATATTTTTGTCCACGCCAACTCCTATCTTCATCACA
CCAGAGATGTATTTACACGCCCACTTGTTCCCGCGCGACGAGCAGAAGCG
GCCGCAACCACAACGCTTTCATCCACATTACGAGCGCCCTGTGCAAGTAA
ACCTGACCATAGCTCTCATTTCAATCGTGGATATCGAACCTCAAAACGAA
GTCATCATCATCAATGCCAACTTTGAACAGATGGCTATACAGAGGTTTCT
ACTTCTACTACTGACGTTGAATGTTTTGTTTCCAATTTGTTTCACCGATG
ATTCACATAACATGCATGAAGAAGCAATGTCGGACGGTATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010346XLOC_010346Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018469-proteinTCONS_00018469-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018469-exon-sc0000300-1575043694:129207..129729TCONS_00018469-exon-sc0000300-1575043694:129207..129729Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1575043694:128736..128932TCONS_00018469-exon-sc0000300-1575043694:128736..128932Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1575043694:128369..128478TCONS_00018469-exon-sc0000300-1575043694:128369..128478Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1575043694:127877..128115TCONS_00018469-exon-sc0000300-1575043694:127877..128115Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1575043694:127475..127675TCONS_00018469-exon-sc0000300-1575043694:127475..127675Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1575043694:126276..127302TCONS_00018469-exon-sc0000300-1575043694:126276..127302Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1575043694:122493..124285TCONS_00018469-exon-sc0000300-1575043694:122493..124285Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1510915933:129207..129729TCONS_00018469-exon-sc0000300-1510915933:129207..129729Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1510915933:128736..128932TCONS_00018469-exon-sc0000300-1510915933:128736..128932Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1510915933:128369..128478TCONS_00018469-exon-sc0000300-1510915933:128369..128478Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1510915933:127877..128115TCONS_00018469-exon-sc0000300-1510915933:127877..128115Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1510915933:127475..127675TCONS_00018469-exon-sc0000300-1510915933:127475..127675Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1510915933:126276..127302TCONS_00018469-exon-sc0000300-1510915933:126276..127302Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1510915933:122493..124285TCONS_00018469-exon-sc0000300-1510915933:122493..124285Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1491911889:129207..129729TCONS_00018469-exon-sc0000300-1491911889:129207..129729Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1491911889:128736..128932TCONS_00018469-exon-sc0000300-1491911889:128736..128932Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1491911889:128369..128478TCONS_00018469-exon-sc0000300-1491911889:128369..128478Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1491911889:127877..128115TCONS_00018469-exon-sc0000300-1491911889:127877..128115Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1491911889:127475..127675TCONS_00018469-exon-sc0000300-1491911889:127475..127675Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1491911889:126276..127302TCONS_00018469-exon-sc0000300-1491911889:126276..127302Clytia hemisphaericaexon
TCONS_00018469-exon-sc0000300-1491911889:122493..124285TCONS_00018469-exon-sc0000300-1491911889:122493..124285Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000300supercontigsc0000300:122493..129729 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.897777	0.613902	0.536485	0.427142	0.140993	0.0861873	0.097767	0	0.0514029	0.118281	0	0	10.3378	13.7899	0.177443	0.081058	3.47864	4.56182	18.0722	17.1772	7.15711	6.29749	4.37907	5.26931	7.72319	12.1999	1.56972	0.54595	0.101185	0.100861
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006029Neurotrans-gated_channel_TM
IPR006202Neur_chan_lig-bd
IPR018000Neurotransmitter_ion_chnl_CS
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005230extracellular ligand-gated ion channel activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005230 extracellular ligand-gated ion channel activity
Blast
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BLAST of TCONS_00018469 vs. Swiss-Prot (Human)
Match: ACHA7 (Neuronal acetylcholine receptor subunit alpha-7 OS=Homo sapiens GN=CHRNA7 PE=1 SV=5)

HSP 1 Score: 152.14 bits (383), Expect = 3.274e-38
Identity = 114/453 (25.17%), Postives = 205/453 (45.25%), Query Frame = 1 
Query:  622 ERPVQVNLTIALISIVDIEPQNEVIIINANFEQSWFNPSMSWDPHNFAGIKKINVRSGMTWVPDIFVHANVENDKKYNGLMDKVNTYVKVNHEGLHTWNAAVTLRMGCGMNIENYPFDTQKCPLRFGSLSMDATRMKLVPKPINLKSYGASPEWIFISMDHVGEEKSYPGSDHPHTTAVYTVAMRRKALYPITMLILPNLILAGLTILVFSIPTPTGERAMYIFTIFLAVAWYMTSNIETMPSSSQTIPLYTKFLAINXXXXXXXXXXXXFTIVCFYTDPQISDMPGWIRVNILGHGAKFFGMDVDKKVSEWR-EELCEARQYDHLLPEEYEPDQEGEVQAEEGNEKAPGDLWVD----CSKPEAGALMNIFNPVEMRQVHLL--------IEDYLRRLEEI----------EDSKWAQREWELVAQILDKAFLYVFSSALTLTVVSCSIHIL 1911
             +P+ V  +++L+ I+D++ +N+V+  N   + SW +  + W+   + G+K +    G  W PDI ++ +   D++++      +T V VN  G   +      +  C +++  +PFD Q C L+FGS S     + L  +  ++  Y  + EW  + +     E+ Y     P+    +TV MRR+ LY    L++P ++++ L +LVF +P  +GE+     T+ L++  +M    E MP++S ++PL  ++ A  +I + L  +     +   + DP    MP W RV +L   A F  M   K+  E +    C+ +Q    L    E        A  GN    G   +D       P++G +            HLL          D  + LEE+          ++S+    EW+  A ++D+  L  FS     T++ C+I IL
Sbjct:   48 SQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSA--DERFDA---TFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQEADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRM---KRPGEDKVRPACQHKQRRCSL-ASVEMSAVAPPPASNGNLLYIGFRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFS---VFTII-CTIGIL 487
The following BLAST results are available for this feature:
BLAST of TCONS_00018469 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACHA73.274e-3825.17Neuronal acetylcholine receptor subunit alpha-7 OS... [more]
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