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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018157 ID=TCONS_00018157|Name=TCONS_00018157|organism=Clytia hemisphaerica|type=transcript|length=337bp
AGCAAGCATAACAAGCAAAGAGTAAATTGTGAAATACAAATTGCTAACAC
ATTCAAAGACAGAAGAAGATCAGTTAGTTTGAGCTCGTCAAAAggaaAGC
CATGAAGAGTCTGGCATTGTTATTGGTCATTGCCATCATCGCCCAGTCAC
ACGCACGTACCTTACGAGGTGATTGCGAGGGAGTTCACTGTCAATACGGA
GGGAAGTGTAAGGAGCTCGTTTATGGCGGCTTTGAATGTAAATGCACAAG
AGGATTCGCAGGAAAGTTCTGTGAGATCGACACTAACAAATGCAAAGGAG
TCCATTGTCAATACGGAGGAACATGCAAAACTGTTGG Run BLAST on NCBI transcript from alignment at sc0000290:331642..332574- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018157 ID=TCONS_00018157|Name=TCONS_00018157|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at sc0000290:331642..332574- (Clytia hemisphaerica)
AGCAAGCATAACAAGCAAAGAGTAAATTGTGAAATACAAATTGCTAACAC
ATTCAAAGACAGAAGAAGATCAGTTAGTTTGAGCTCGTCAAAAGGTATTT
TTAACTTTTTTTAATCTTTGTCATCAGTTACATATTTTATTTAACATGTC
ATTGCAGGCATTTTTCTTCTTATAAAGTTTCAACCCTTTAATCATTTCAT
CCCTTAACAGAAATCACGAAAAGAAATCTGACCTTTTTATTTGATTTTTT
TTTCATTTTAGGAAAGCCATGAAGAGTCTGGCATTGTTATTGGTCATTGC
CATCATCGCCCAGTCACACGCACGTAAGTTGATGTCAGATTCATATACCG
GGTGTGCCACAAAAAAGTTTCACTTTAAAACTAGAAATCTAGAAATCTAA
ATTAAAAAAAAAACATTCCTATTTTATTGGAAAGAATAATGATAAACTAA
AATTTTGATGGGTTATTTATTAAATTCGATTCATTAGATCAAATCAAATT
ATGCTCAATTGAATAATAAAGTTACTTTCAGAAAGTGCTCGAAATGTTTG
TTTCTACTTCTTTTTATCCTTCAAAGTATATATTCGCATTACAAGAAAAA
TAAGTTTTTGAAATTATTTTCTTCCAGCTTACTGCTCATGAATTTTAGGG
AAAATATCTTTAAAAGTCCCTTCGTTGATCTAAAATCGAAACTGTCAAAA
GAATTATACACTGTTAAACACGATATCAGAAAATAATATCATTTCTATTT
AGGTACCTTACGAGGTGATTGCGAGGGAGTTCACTGTCAATACGGAGGGA
AGTGTAAGGAGCTCGTTTATGGCGGCTTTGAATGTAAATGCACAAGAGGA
TTCGCAGGAAAGTTCTGTGAGATCGACACTAACAAATGCAAAGGAGTCCA
TTGTCAATACGGAGGAACATGCAAAACTGTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018157-exon-sc0000290-1575043694:332481..332574 | TCONS_00018157-exon-sc0000290-1575043694:332481..332574 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1575043694:332252..332313 | TCONS_00018157-exon-sc0000290-1575043694:332252..332313 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1575043694:331642..331822 | TCONS_00018157-exon-sc0000290-1575043694:331642..331822 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1510915933:332481..332574 | TCONS_00018157-exon-sc0000290-1510915933:332481..332574 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1510915933:332252..332313 | TCONS_00018157-exon-sc0000290-1510915933:332252..332313 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1510915933:331642..331822 | TCONS_00018157-exon-sc0000290-1510915933:331642..331822 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1491911889:332481..332574 | TCONS_00018157-exon-sc0000290-1491911889:332481..332574 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1491911889:332252..332313 | TCONS_00018157-exon-sc0000290-1491911889:332252..332313 | Clytia hemisphaerica | exon |
| TCONS_00018157-exon-sc0000290-1491911889:331642..331822 | TCONS_00018157-exon-sc0000290-1491911889:331642..331822 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290 | supercontig | sc0000290:331642..332574 - |
Blast
The following BLAST results are available for this feature:
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