TCONS_00017983 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017983
Unique NameTCONS_00017983
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1454

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017983 ID=TCONS_00017983|Name=TCONS_00017983|organism=Clytia hemisphaerica|type=transcript|length=1454bp
ATTCATATCACATGATGAGGTGCTTCTGGTTCCACAATTAGCCGATTTGA
AGATGAATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGAC
CAGAATAAAGATGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATTT
ATCTTCCATTGGCAATTACGTCACACAATTACGTCATGATCCATCACGAT
TACGTAATGTGACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGAT
TTGTTGAAATATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGATT
ATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACCGC
TacaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATGAC
AGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAAGA
CAAAAAATGCCGCGTTTGCAGATATCTTTCTTTCACCATGTTCTTGAACG
ATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTTC
AAAGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTATCTATACTC
CAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCATTTCACAC
CAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGGT
GGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGAGAAAcggtgaaatt
tgaaaaagtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAAG
GGATTCGTTACCATGGAAAGATCATTGAACAGACACAAATCATGGGATAT
TGGTGGGTTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGAA
TCGAGAGTTTGAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGAA
ACGAAGGTTGTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAAA
GCTGTTTTCTGGTACAACCATCATTTGAACCCCCTGAATGATATGGTTGG
ACCTTTAAATCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGGG
TCAAATGGACCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCTT
AAATTACGTACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAAA
AATGCGGAAAATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAAA
TCGAGGAATACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAACT
GGGAATGATTCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGTAA
TGCATTGCAAGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACAAT
TATCCATAATGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTATG
TAAG
Run BLAST on NCBI

transcript from alignment at sc0000282:123609..135334+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017983 ID=TCONS_00017983|Name=TCONS_00017983|organism=Clytia hemisphaerica|type=transcript|length=11726bp|location=Sequence derived from alignment at sc0000282:123609..135334+ (Clytia hemisphaerica)
ATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGT
CTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGG
GATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTC
TCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAA
GTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGAT
GAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTT
CCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACG
GATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGG
TCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTG
GGATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTT
CTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTA
AGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGA
TGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTagttaaatat
ttttgtataaGGTTGTAAGTAAACTCCTCCTTTGGGATTATAATCAAGAC
AGATTCATATCACATGAcgaggtttgttttgatttctccCTCCGAAGAAG
AGTCTCTTAGTTAAAACTTTCCGTGAAAGGTTGTAAGTAAACTCCTTCTT
TGGGATAACTTCAAGACGGATTCATATCACATGTTGAGGTTAGTTTTGAT
TTCTCCCTCCGAAGAAGGGTCTcttaattaaaagtttttcgtATAAGGTC
GTAAGTAAACTCGCATGATCTCTATGCGAAGGTCTCTTTTTAAAGGttat
caataactcttgatgtCCAAGTTAGTAATTTTTCACTGCGAagaagggta
ccttttttaggGAAACtttacaccttttcgactgtagtcgcgcggtcagg
tgcgTGCCACTATATTATTTAATTACCCCCCAAATCAATCCAATCCTTCT
TTTACACCTTTTTTCTGTTGTCCATAGGTGCGAAAAAATGACTAGGACTG
TTTTAGGGTGGTGAaaaggacaaaaaatgcccacgtggcaattggcggct
acggtcgaaaaggtgtattgcgtCCCTCACACGACTTAAGGtttaatctc
aaaattaataccttatgaaatttagagttttactgtggtggtcatctttg
agattgagattgcccttttttcatgtagaggaatagtcgatgttttcata
tgacaaaaaggccaatctcaaaggcagaacaggattgcaagatttccaat
tttccaagacacttattttgagattgaacctttagttAGCCTTTACGAAT
GCCCTCAACagatattgggcttttccagaaaaaaatcgtgcaccccctgt
tgaggaggtccatttccgttccaagggggtaaggtttgaaatgtagtgga
attccataagggtagacgaaaatccgtcaaaaataagcggaattccaagg
gggtaatgattgaaaatttgtaaaaattcggaattccagaggggtttgaT
CCTAAAactgcctggaattccaagggggtaggtcacaaaaggttgaacct
cctcaacagggggtgcacggttttttcctggaaaagcccagctggaaaga
aaaaactttgttttaacGGCTATACAAAACAAACTTTTCCACAGGTGCTT
CTGGTTCCACAATTAGCCGATTTGAAGATGAATTTGGAGCAAGTGGATGA
CATGTTTTTCATGCTCAAAATGGACCAGAATAAAGATGGTAAGATTACTA
GCTATATTGAGAGAAGAGTTTTACACATCCAGTTTCCTGGTTATCCAATA
GCAACTTTTCTAATTTTGTGAGTATAAATTTCATAGGGTGGTGAATTATA
CTGGAAAGAAATAAAGCGGTCAACTTCTCTGCTAGATGATGTTAGGTTAA
GCCTGGGATTAAGGGTGTAGGACAGTTGTAATTGGGCGTaatcagctggc
acacaacgttgcttcaacgttcatctaacattatatggacgttgggaACA
TCATATAAACGtcgaaagaacgttgtgtgtcagctgggtaatcaaaacaa
atcaaaacttgATCTAATTTCTATCAATATAAAGACCAGCAACATTTCAA
GATGGTGAGCATCAAAGATtacatcccagctggcacacaacgttgtttca
acgtttatctaaatgttatatggacgttgtgaacgttagataaacgttga
aacaacgttcataaaatacacttttttcatTCAGGAAAAGTCGAGCTTAA
TGAACTGAAGAAGATCGATTTATCTTCCATTGGCAATTACGTCACACAAT
TACGTCATGATCCATCACGATTACGTAATGTGACGGTCGAAAGTGGTTGG
GTATGGGCGGATGAAGATGATTTGTTGAAATATGAAAAGAACGGATATTT
TGAAGACTATCACGCCAGGTAGGTGATGAGTACCtaaccaaaaaccggga
tttttcattccgCTTTTTGGTGAGATAAAGCCTATACTAGACGGTATGGC
TTTTTTTCTGCGCAGTagcgtctattccactttgctaTTCCACTTtgtga
ctttttcgaatgtttggagctcaacttttctagatccaaacattcgattt
tttttgccgtcactttaaactttcgaaCCTCTTGCTGTAGGGGAAAATAT
AATTTACTTCAGAATACTTAAAAGGCTTCTTTCACTAGAATTAAAGGCCG
TTACATATCATCATCATTGAcgagcaatgatgatgatgatttagGGTAGC
CCCAATCGAAACCTAAAAACTTGTGGTGTCGGAAGGCAAAATTAGATTCA
GTAGATTCATCCAATGTATCTTGTGTTTAGATTATCAACATTAACAGAAG
TCCCGTCCATCCTCTGGGAAATGAGCGAACCGCTacaaatccgccattat
ggagcaTCACAATTCCAAACACATCGCCATGACAGCGAGGCACCAAACAA
AGACATCCCATGCTGTCTCTATGGTGATCAAGACAAAAAATGCCGCGTTT
GCAGgtaggttttatttttatattagaTCTAAACTTTCCGCTATGCTTTT
CAAGGCTGTAagcattgagtttgaagcccagAAGTGGCTAGAGAGtaatc
tttaacctttcctaAGGTGAGGCTTATTCAATTTGTTGTTTAAGCTACCA
AAAAAAGAGGGTTGTttggtcggcgaaaaaataaaaataaaagtagaatt
tcacctataaaatctccaCAAAAAGCAGCAAAAACTACTTCCTCTTGACA
AAAAtgtgaaatagaaaataaaaagacacaaaaaggttGAATACatggat
gaaatgaaaaatttaacataaaattctcaaaagcttggaaaaactaccaa
aattttgaaaatttgtgagTCTGATCTTTTGATTCAACATTAAATCATCG
AACAAACACAATGTCAAATTCAGTCTCTTTATTcgcgttgtttttttttc
aaaaatccctAAAAATGACCCTTTTGACCTTTTGATGACGTTATAATATT
TCATGCaccattttagaattttgatGTAATTGGTGCCTATAATGTGGATA
TATTTCAAGGACATTGGACTACCCTGCTAGAAATCATTGAAGGGGGTTTA
ATGTCCCCccccccaggggggggggggggggggggaaaaaaatttttaaa
aaaaaaattttttttttaaaaaaaatttccccccccccccccccccccgg
ggggggggggtggaggcgAAATGATCTTATAATCAAGAACTTCTCATTTG
AAAACGCCTATCAAAAACTGAATCTCACTTTGGTTCAATGTtgacaaaga
aaaatatatttgaaaaataagattaattaaaattacaataaaatAGTTAA
TTAAACTTTTGAAGGCAATGCATTCAGGTAAAAATAGCCttctgtttttt
tgtttgtttttatttccaaTAGTAGGAAAAGTCTGGATAATTCTTCTCAT
ATCTAATTATCTGATGCCATTACTCGTGGGTGGGGAAAAACCATACAAAA
ATAACGAGTTCATTTCTGTTGGACGTGCAGATGTGCATTTGAAATATTAC
AGTCGTTGCCTTGGAAACGGCTAACAAACTTAACTTACTGGTAGACATGA
ATGAAAACAATAGCTGATTTCAAATCGCCGTAAAAAAAATCTTCAGGAAT
ATCTTTGTAAGACCATTGTTCAAAAGTGTCACGTTTGTTAATTCTTACCA
TTTGTGCGCATTTATTTGAATCGGTAGGGTGGAGCACAGAAATGGTTACA
TTCTCCCATAGGCTTTTTGGGAGCCCTTGAACCATAAATAATCGTTTTTG
TTCCAACATAAGGCACGTGCTCAAAACTAAACCCAAGTAATCTTTACACT
CTTCAAATTCCTTCTTCATAAAGGAGAATTTTTTCGTTCTGTAAAGTTCT
TTGTTCCCCATAAAGGAACTTATATTTTCATACCATTCCTTATACGAGGG
GTACAAATCAACCCGTTGTGTTATGTTTCCTTCAAAAAACATCTCAGCTC
CCCAAACAAGTCGACCTAGCTTAGAAACAGGAGGATTTTGTGCATCATTT
TGTCCCAGCTTTATTTTAAGCAACTCAATTTTATGTTTTAGCGTTTGAAT
TTCACCCTCCAAAGCACGATTAACTGCAGCTTGTTTTTGGTCTACTTTTA
GTTTAATAATTTCTTGGTCATGTTTGAgattttggatttctttttccATC
TCTAAACACTTTATCTGGTGtttcagattttctttttccttgtCTTCTCT
CAACTTTGCATTTTCTTGTTTAAGtctttgaatttcttccctCGGATCCA
TTCCTCGATCGACTGCGCAGTGTGCTTCGTTCATTGTGATTATGATTAAA
GTTTCTCCACTTTACTTTTTTACGTACAACTTTCACTTCTATCTAAATTA
TCGTCAATCATGAAAAGTTTTCGATATCAAAGGTTCAAACCCCCCTATGT
TTAAAAAATCTACAACTTTCCTGTACATATAATGAATTGTGTTTTCAAGT
ATATTGGCTAAAAATGCCTTCtaataccactatttattacctATTAAATA
CAAAATTAATCTTTCAATaccattattttattttatttgttatcTAATTA
ATGTGCATTTAGCATCGACAAGTATTTTGAGTATTTGTTATTAGAAAATG
TATGGTTTTCGATCcgaaattttttaacaaaatctagAACTAGAGTCGTT
GTTGTATAAAAGATTATTTACTCGAAATCGATTTTTTCCAGAGCGAAGCC
TCACTCAGAtatgaacaattttataaaggACCACGAGGCTGAAGTTTTGC
AGAAACTTAAGAACATTCTGAACGACGAGGCTTAAGTTTTGCCGAAACTT
AAGAACATTCTGAACGACGAAttataaagttttaaaataagaaatcgaaa
taataagaacaagtgaggttaagtcaaaattttcaaaatttaatccaGTT
CATCTGATTTCCACTCATAGATATCTTTCTTTCACCATGTTCTTGAACGA
TGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTTCA
AAGTGAGTTCAAAATGTTATTTTAATCCACAAGAGGATATAGAAGTCATT
TGCTATGAAAGTTTGATTCGAGGCAACCAAAAAAAATTGCCGATCCAGAA
cactactctgatacaagagtgtgggtgatatgccagacattgtggtgtgt
ggTTTTACTCATCCCGTTCTGTGCCTGAGACGAGCTATATGCTCTCCCGC
GTAGTCCAAGTGTCACCACTATACATCATGGTATCTGTGTCTCGCCTGCA
CAGAACCAGCGGTGTCTGGACAGTGCTATGCATTCCTACTTGAGAAAGGA
GGAAGGAGTAGTATCCATTCCCCGATGTGGAGGACTCTTATCATTGTATC
AACAACTGCGAAAAAGTGTGAGTCCACGCAAAATGGAAGCTTGGATGCTT
GATAGGCTGTAGATCTAGAACGCCATCGCTTAATTAAAGTTGTTTGATGG
TTGTTTTTTGAATACATTCAACTACCATTGATTTGTTTTCAGGACATCAT
GAAAAATTCTGGTGAATGGCATGGCTATTATCTATACTCCAAAACCACAG
GCAGTAGAACATTTTTCACCGTCGACATGCATTTCACACCAGGAGAAAAC
GACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGGTGGAGAGTTCGT
GTTCCGTAATGCGGTAATTGAAGGTATTTAAATGATTTTTAGGACTTTAG
AGTTCACTTTgtcaacaatttaaaaaaactagaccatagatttataaagc
ccgaagggctagatgtcctGAGATGTCGTGCTTTTTGTCGTGAGGTtaag
taggaaatcctacctaggtcacgtgatattacaatagaatttcagcgctt
gaccaagaAGAAGCTCTGGcagtcaagaacaccttcaaattagcctatca
tagactgattagcctatcataggctatttagactattttatataggctat
ttagccgaaaatcgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTTTCTGATAATGAAGTTCTGCTGAATCGA
CAAAAAGCCCGATTTTCTTACCCTGCGCATGCGCACGCATGCGCAGTacc
aaaaagtggaatatttcctaaaccaaaactgacccaaagtcaaaatttgt
catgagcatttctctgacaatgagaaaccatgtattccttagagaagacg
cgactatttatatttcgtcataaatcgaggtttttatcgattttcggcta
aatagcctatataaaatagtctaaatagcctatgataggctaatttgaag
gtgtcctTGACTGTCTgggggttttcgaaaacaatagcagcaatattatt
tgcgatattcacttttttcttttgcttggaagagcttaaagcacgacacc
TAGCCCTTCGGGATTATTTTACGGGATTTTGTCGATGTTTTATCTTTTAG
CtagaccactgacctttataaagcATGGACAAAGCTATATCTACCATCTT
TGACTACTCGATGTGGGGTCAATTTatatttcaatgaaatttaCTGCGTT
TAACAAAGGTTTCCACCCACCGAAAAACTCTGATAAAAAATTTGAGTGAC
TGTGTCCAAGCAATATAAAGGTCAGTAAGCTAGACTCCTTTGTAGTGTAG
TCTTGAACAACTTAAActaacaaactttaaacatactgaaatgaaaatca
aaatcaaaaacaacaaactttGTCTCTTTATTGTGTTATATTTTCACCGG
GATTTTCGCTTCCTTGACGTTAGAAAAATGGCGTCTGAAATATATTGGCA
AAAAGTGAATTCGTCTCGATTTCATGCAAAATTCTGATGCTATTTCGTTT
GAAACTTTTGCCTGTGGCATTTTCAAATTATATCACCTtttcttttaaca
ttttcttttaacTGTCCCTTCAACATTTTGACCATTTCTATCATAGACCG
TTTCACGGTCGAAATGAATTATGGGTAATCATGACTGATTAAATCAACGA
CTTCTCTTTAACACAATCAGAATTTTAGAGCAGCGCAACAGAAGGATGCA
ATGAAACGCTGTGGTCCTACTTACCCATGATTCCTTCGACCGTGAAATGA
CGTATATAAGTAAGTCCGATTGGGAAATAtagaccacagatatcttataa
aacactagataaagCTACTCTATCCTGCTTTACCAAGCTAAGGAGGGAAG
CAAAATAATACGCCATCTTTGCTGAGAGTAGGTCACAGTAGAAGCCCAGG
TTTTCACTGTTGAAGTTTTTTTGActctgcaatgacttcaaaatttcaag
gatcGCGCAAACGAAATTGTGACGTCAGTTTATTCAAGATAGCGCGTCAT
TTTGCTTCAAATAGGGATTAAGAGGAAACTCTATCGAGTgctttatataa
gatatctgtggaaGAGACAGGATCTCCCACTTCAAGGACATTCTTCTTTC
GCATCTAGGAGAAAcggtgaaatttgaaaaagtttacaaacCATCCGAAG
CTGAAGAGACTGGAAACGAACAAGGGATTCGTTACCATGGAAAGATCATT
GAACAGACACAAATCATGGGATATTGGTGGGTTCCTGGCAATCAACGAAT
GAATGGCCGTTTCTTCATGTGGAATCGAGAGTTTGAGGTACGTCTTttac
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttctcAG
CTCTTCTTGGAGgaatattggaaagatattcccaattcaaaatttcgtgt
cattataagcattttgtttgattttactcgtctgatgatttttttctcac
acaccagatttcataactGTGTCCGTTTGGTATTCTGGCAttattgtttt
caaacttttggccagcaaaagtacgaatagaaaaagttagagaacttttt
agaaataagagtatttatcatttttcaaaatcagagtccttcgagccgcc
atgacagttgtcctttgcggacaaagcctgtacattgattgttttctgaa
acaatagaaagacaatacttcgctctccagtttcattcgatgtttatcca
gagtctctataataaatccatgatgTGACGAagcctaatttttgaaaaag
aaaaattcttggTTCCCACATTTTCTCAAGGCCTTATTTATCGGTAGTTt
agctttctctgaaatttaACCTGTGGAGACGGACTATAAGAATTTCATTG
CGCATGTCTCAATCATAAATGACACGACCTTCAACCAAGATTCTGGGTGA
TTCCCATGGCAACTTTTGTCTTCGTTAAATGTGCTTTGAAAAGAATATCT
GTCGTCACAGTgtactttttttcttctatttggttgagtcgcaggaggct
ttgaggcccattttcgcaactatagacgctttcaattNATTGAGTCGCAG
GAGGTTTTGATGCCCATTTTCACAACTATAGACAGATAGACGCTTTCAAT
AAGctccccgtcagcaccttgaactaactacccaattcccctcacatggc
atgggttgacccgggcgaaggttcattcacttgccaagtgaaccgctgcg
agtgggaatcgaacctcagttgcctgtgcagcaaccaaggtcaatgacca
ctataccacagcgcctgtACAATTCACACACTGTGAAGCTCATTATGCTA
AATCAATTTCTTAATTACCAGTATGTGCACAATTTactatcattaaaaaa
aaattaaatccgcTTTTTTGTCAGCCATAGTTTCCTCCCCCTTTTCTGCT
AGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg
gggggggggggattttttggaaactttttgccaaagaaggggggggggag
aaaaaaacatatagtctgaatcacagacctctatagatataggTACTTGC
TATAAGAAATCTTTTCGATAGAGGATGAGCATAGGCCTGACCTTCAAATA
GACCCTGGAGGCAGTTTTTCGGCcctggccaagcaaaatctttagATCGG
GGTTTCTTTGAAAGGGTACcttaccctaatggtagcactattAGTATGCA
TCGATACTACTTGTGATGCAGTGCTACTTCGATAGTTTCTGTATGTGGCT
CCcacgcaaatttttttccgtacatggaAAGTATCATCGAtggtcgggag
tatctcatattttttgtttggttttgttgtttggaattgcttaggtcagg
gttgctagtaacggctcgaatttcagtcaggttaaaaaaggggcaatttt
acccatattataataacattaccccgtcttttttgtcattataTAAGTAT
TTCCTAATGttgtgttctgctgtgcgagtgtggctcaacggatagcgcgc
tgggtttctgatcagaaactctttcatttggtgggttcgaaccccggtcg
ggtctatatttcaaggtttaagataagtttaagatactccggcccgtcga
tgatactcccgaccgtcaagatgagatactcccgaccatgtacggaaaaa
aatttgcggcTCCCACTTTTAAAAAAcaccaatcaaagatggcgcatAAA
GCTCTGTCCATGATTATAAAGACCAGTGTTGTCATCCCGTTTAAAATGAT
ACCGTTAATCATATTATTTATGCCCCCTTTTTCAGATTTACTCCGCCCGC
GCGGTCGACCAATCAAATCGAAACGAAGGTTGTTTGAAAGCTCCTTTGAA
AATCAAACCGAAAAAAGGAAAAGCTGTTTTCTGGTACAACCATCATTTGA
ACCCCCTGAATGATATGGTTGGACCTTTAAATCATGAGGCGATTTTCGCA
CATTGTGAAGTGAACCAAGGGGTCAAATGGACCGCGTCTGGTCGGCTAAA
TATCATCGGAGATGGAGAGCTTAAATTACGTACGTGGAGAAGAGGAACTA
ATTTAATGCATGACCGGAAAAAAATGCGGAAAATTTATCAGCGGTTAGGA
ACGAACGAACCAAAGCGAGAAATCGAGGAATACGAAAAAGACTTTTATGA
AGAAATTCACGGTAAAAAAACTGGGAATGATTCTGCAAAGGATTCTGGGT
ATAAATATAAACAATCGAGTAATGCATTGCAAGCGTTGAACCTGTTGGTG
AACGATTTATCGAATGAACAATTATCCATAATGGCAGCCAATGTGCATCG
CATTTTAGGCCTGCAGTGTATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010080XLOC_010080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017983-exon-sc0000282-1491911889:123609..123627TCONS_00017983-exon-sc0000282-1491911889:123609..123627Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:123609..123627TCONS_00017983-exon-sc0000282-1510915933:123609..123627Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:123609..123627TCONS_00017983-exon-sc0000282-1575043694:123609..123627Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1491911889:125403..125496TCONS_00017983-exon-sc0000282-1491911889:125403..125496Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:125403..125496TCONS_00017983-exon-sc0000282-1510915933:125403..125496Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:125403..125496TCONS_00017983-exon-sc0000282-1575043694:125403..125496Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1491911889:125993..126176TCONS_00017983-exon-sc0000282-1491911889:125993..126176Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:125993..126176TCONS_00017983-exon-sc0000282-1510915933:125993..126176Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:125993..126176TCONS_00017983-exon-sc0000282-1575043694:125993..126176Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1491911889:126589..126762TCONS_00017983-exon-sc0000282-1491911889:126589..126762Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:126589..126762TCONS_00017983-exon-sc0000282-1510915933:126589..126762Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:126589..126762TCONS_00017983-exon-sc0000282-1575043694:126589..126762Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1491911889:129229..129310TCONS_00017983-exon-sc0000282-1491911889:129229..129310Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:129229..129310TCONS_00017983-exon-sc0000282-1510915933:129229..129310Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:129229..129310TCONS_00017983-exon-sc0000282-1575043694:129229..129310Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1491911889:129801..129981TCONS_00017983-exon-sc0000282-1491911889:129801..129981Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:129801..129981TCONS_00017983-exon-sc0000282-1510915933:129801..129981Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:129801..129981TCONS_00017983-exon-sc0000282-1575043694:129801..129981Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1491911889:132517..132695TCONS_00017983-exon-sc0000282-1491911889:132517..132695Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:132517..132695TCONS_00017983-exon-sc0000282-1510915933:132517..132695Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:132517..132695TCONS_00017983-exon-sc0000282-1575043694:132517..132695Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1491911889:134794..135334TCONS_00017983-exon-sc0000282-1491911889:134794..135334Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1510915933:134794..135334TCONS_00017983-exon-sc0000282-1510915933:134794..135334Clytia hemisphaericaexon
TCONS_00017983-exon-sc0000282-1575043694:134794..135334TCONS_00017983-exon-sc0000282-1575043694:134794..135334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:123609..135334 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.207925	0.170225	0.138448	0.108484	1.03339	1.0442	2.02176	0.0461588	0.738798	0.395664	1.69278	1.14821	1.2017	1.2444	0.94723	1.96161	1.78805	1.64054	0.127802	0.140793	1.70269e-06	0.66109	0.496178	0.543288	0.884923	1.02225	0.167589	0.0861226	0.311648	0.224943
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017983 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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