TCONS_00017976 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017976
Unique NameTCONS_00017976
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1455

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017976 ID=TCONS_00017976|Name=TCONS_00017976|organism=Clytia hemisphaerica|type=transcript|length=1455bp
GATTCATATCACATGATGAGGTGCTTCTGGTTCCACAATTAGCCGATTTG
AAGATGAATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGA
CCAGAATAAAGATGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATT
TATCTTCCATTGGCAATTACGTCACACAATTACGTCATGATCCATCACGA
TTACGTAATGTGACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGA
TTTGTTGAAATATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGAT
TATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACCG
CTacaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATGA
CAGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAAG
ACAAAAAATGCCGCGTTTGCAGATATCTTTCTTTCACCATGTTCTTGAAC
GATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTT
CAAAGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTATCTATACT
CCAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCATTTCACA
CCAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGG
TGGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGAGAAAcggtgaaat
ttgaaaaagtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAA
GGGATTCGTTACCATGGAAAGATCATTGAACAGACACAAATCATGGGATA
TTGGTGGGTTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGA
ATCGAGAGTTTGAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGA
AACGAAGGTTGTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAA
AGCTGTTTTCTGGTACAACCATCATTTGAACCCCCTGAATGATATGGTTG
GACCTTTAAATCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGG
GTCAAATGGACCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCT
TAAATTACGTACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAA
AAATGCGGAAAATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAA
ATCGAGGAATACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAAC
TGGGAATGATTCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGTA
ATGCATTGCAAGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACAA
TTATCCATAATGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTAT
GTAAG
Run BLAST on NCBI

transcript from alignment at sc0000282:122561..135334+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017976 ID=TCONS_00017976|Name=TCONS_00017976|organism=Clytia hemisphaerica|type=transcript|length=12774bp|location=Sequence derived from alignment at sc0000282:122561..135334+ (Clytia hemisphaerica)
GATTCATATCACATGATGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGA
GTCTCTTAGTTAAAAGTTTTTGTATAAGGTTGTAAGTAAACTCCTACTTT
GGGATTATAATCAAGACAGATTCATATCACATGATGAGGTTAGTTTTGAT
TTCTCCCTCCGAAGAAGAATCTCTTAGTTAAAAGTTTTTGTATAAGGTTG
CAAGTAAACTCCTACTTTGGGATTATAATCAAGACAGATTCATATCACAT
GATGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAA
AGTTTCCGTAAAAGGTTGTAAGAAAACTCCTACTTTGGGACGGATTTTAT
ATCACATGAtgaggtttgttttgatttctccCTCCGAAGAAGAGTCTCTT
AGTTAAAAGTTTTTGTATAAGGTTGTAAGTTAACTCCTCCTTTGGGATTA
TAATCAAGACGGGTTCATATCACATGATGAGGTTAGTTTTGATTTCTCCC
TCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAA
ACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATGAGG
TTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCG
TATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATT
CATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTC
TTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGAT
TATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTCC
CTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTA
AACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATGAG
GTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCC
GTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGAT
TCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCT
CTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGA
TTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTC
CCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGT
AAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATGA
GGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCC
CGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGA
TTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTC
TCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGG
ATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCT
CCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAG
TAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATG
AGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTagttaaatattt
ttgtataaGGTTGTAAGTAAACTCCTCCTTTGGGATTATAATCAAGACAG
ATTCATATCACATGAcgaggtttgttttgatttctccCTCCGAAGAAGAG
TCTCTTAGTTAAAACTTTCCGTGAAAGGTTGTAAGTAAACTCCTTCTTTG
GGATAACTTCAAGACGGATTCATATCACATGTTGAGGTTAGTTTTGATTT
CTCCCTCCGAAGAAGGGTCTcttaattaaaagtttttcgtATAAGGTCGT
AAGTAAACTCGCATGATCTCTATGCGAAGGTCTCTTTTTAAAGGttatca
ataactcttgatgtCCAAGTTAGTAATTTTTCACTGCGAagaagggtacc
ttttttaggGAAACtttacaccttttcgactgtagtcgcgcggtcaggtg
cgTGCCACTATATTATTTAATTACCCCCCAAATCAATCCAATCCTTCTTT
TACACCTTTTTTCTGTTGTCCATAGGTGCGAAAAAATGACTAGGACTGTT
TTAGGGTGGTGAaaaggacaaaaaatgcccacgtggcaattggcggctac
ggtcgaaaaggtgtattgcgtCCCTCACACGACTTAAGGtttaatctcaa
aattaataccttatgaaatttagagttttactgtggtggtcatctttgag
attgagattgcccttttttcatgtagaggaatagtcgatgttttcatatg
acaaaaaggccaatctcaaaggcagaacaggattgcaagatttccaattt
tccaagacacttattttgagattgaacctttagttAGCCTTTACGAATGC
CCTCAACagatattgggcttttccagaaaaaaatcgtgcaccccctgttg
aggaggtccatttccgttccaagggggtaaggtttgaaatgtagtggaat
tccataagggtagacgaaaatccgtcaaaaataagcggaattccaagggg
gtaatgattgaaaatttgtaaaaattcggaattccagaggggtttgaTCC
TAAAactgcctggaattccaagggggtaggtcacaaaaggttgaacctcc
tcaacagggggtgcacggttttttcctggaaaagcccagctggaaagaaa
aaactttgttttaacGGCTATACAAAACAAACTTTTCCACAGGTGCTTCT
GGTTCCACAATTAGCCGATTTGAAGATGAATTTGGAGCAAGTGGATGACA
TGTTTTTCATGCTCAAAATGGACCAGAATAAAGATGGTAAGATTACTAGC
TATATTGAGAGAAGAGTTTTACACATCCAGTTTCCTGGTTATCCAATAGC
AACTTTTCTAATTTTGTGAGTATAAATTTCATAGGGTGGTGAATTATACT
GGAAAGAAATAAAGCGGTCAACTTCTCTGCTAGATGATGTTAGGTTAAGC
CTGGGATTAAGGGTGTAGGACAGTTGTAATTGGGCGTaatcagctggcac
acaacgttgcttcaacgttcatctaacattatatggacgttgggaACATC
ATATAAACGtcgaaagaacgttgtgtgtcagctgggtaatcaaaacaaat
caaaacttgATCTAATTTCTATCAATATAAAGACCAGCAACATTTCAAGA
TGGTGAGCATCAAAGATtacatcccagctggcacacaacgttgtttcaac
gtttatctaaatgttatatggacgttgtgaacgttagataaacgttgaaa
caacgttcataaaatacacttttttcatTCAGGAAAAGTCGAGCTTAATG
AACTGAAGAAGATCGATTTATCTTCCATTGGCAATTACGTCACACAATTA
CGTCATGATCCATCACGATTACGTAATGTGACGGTCGAAAGTGGTTGGGT
ATGGGCGGATGAAGATGATTTGTTGAAATATGAAAAGAACGGATATTTTG
AAGACTATCACGCCAGGTAGGTGATGAGTACCtaaccaaaaaccgggatt
tttcattccgCTTTTTGGTGAGATAAAGCCTATACTAGACGGTATGGCTT
TTTTTCTGCGCAGTagcgtctattccactttgctaTTCCACTTtgtgact
ttttcgaatgtttggagctcaacttttctagatccaaacattcgattttt
tttgccgtcactttaaactttcgaaCCTCTTGCTGTAGGGGAAAATATAA
TTTACTTCAGAATACTTAAAAGGCTTCTTTCACTAGAATTAAAGGCCGTT
ACATATCATCATCATTGAcgagcaatgatgatgatgatttagGGTAGCCC
CAATCGAAACCTAAAAACTTGTGGTGTCGGAAGGCAAAATTAGATTCAGT
AGATTCATCCAATGTATCTTGTGTTTAGATTATCAACATTAACAGAAGTC
CCGTCCATCCTCTGGGAAATGAGCGAACCGCTacaaatccgccattatgg
agcaTCACAATTCCAAACACATCGCCATGACAGCGAGGCACCAAACAAAG
ACATCCCATGCTGTCTCTATGGTGATCAAGACAAAAAATGCCGCGTTTGC
AGgtaggttttatttttatattagaTCTAAACTTTCCGCTATGCTTTTCA
AGGCTGTAagcattgagtttgaagcccagAAGTGGCTAGAGAGtaatctt
taacctttcctaAGGTGAGGCTTATTCAATTTGTTGTTTAAGCTACCAAA
AAAAGAGGGTTGTttggtcggcgaaaaaataaaaataaaagtagaatttc
acctataaaatctccaCAAAAAGCAGCAAAAACTACTTCCTCTTGACAAA
AAtgtgaaatagaaaataaaaagacacaaaaaggttGAATACatggatga
aatgaaaaatttaacataaaattctcaaaagcttggaaaaactaccaaaa
ttttgaaaatttgtgagTCTGATCTTTTGATTCAACATTAAATCATCGAA
CAAACACAATGTCAAATTCAGTCTCTTTATTcgcgttgtttttttttcaa
aaatccctAAAAATGACCCTTTTGACCTTTTGATGACGTTATAATATTTC
ATGCaccattttagaattttgatGTAATTGGTGCCTATAATGTGGATATA
TTTCAAGGACATTGGACTACCCTGCTAGAAATCATTGAAGGGGGTTTAAT
GTCCCCccccccaggggggggggggggggggggaaaaaaatttttaaaaa
aaaaattttttttttaaaaaaaatttccccccccccccccccccccgggg
ggggggggtggaggcgAAATGATCTTATAATCAAGAACTTCTCATTTGAA
AACGCCTATCAAAAACTGAATCTCACTTTGGTTCAATGTtgacaaagaaa
aatatatttgaaaaataagattaattaaaattacaataaaatAGTTAATT
AAACTTTTGAAGGCAATGCATTCAGGTAAAAATAGCCttctgtttttttg
tttgtttttatttccaaTAGTAGGAAAAGTCTGGATAATTCTTCTCATAT
CTAATTATCTGATGCCATTACTCGTGGGTGGGGAAAAACCATACAAAAAT
AACGAGTTCATTTCTGTTGGACGTGCAGATGTGCATTTGAAATATTACAG
TCGTTGCCTTGGAAACGGCTAACAAACTTAACTTACTGGTAGACATGAAT
GAAAACAATAGCTGATTTCAAATCGCCGTAAAAAAAATCTTCAGGAATAT
CTTTGTAAGACCATTGTTCAAAAGTGTCACGTTTGTTAATTCTTACCATT
TGTGCGCATTTATTTGAATCGGTAGGGTGGAGCACAGAAATGGTTACATT
CTCCCATAGGCTTTTTGGGAGCCCTTGAACCATAAATAATCGTTTTTGTT
CCAACATAAGGCACGTGCTCAAAACTAAACCCAAGTAATCTTTACACTCT
TCAAATTCCTTCTTCATAAAGGAGAATTTTTTCGTTCTGTAAAGTTCTTT
GTTCCCCATAAAGGAACTTATATTTTCATACCATTCCTTATACGAGGGGT
ACAAATCAACCCGTTGTGTTATGTTTCCTTCAAAAAACATCTCAGCTCCC
CAAACAAGTCGACCTAGCTTAGAAACAGGAGGATTTTGTGCATCATTTTG
TCCCAGCTTTATTTTAAGCAACTCAATTTTATGTTTTAGCGTTTGAATTT
CACCCTCCAAAGCACGATTAACTGCAGCTTGTTTTTGGTCTACTTTTAGT
TTAATAATTTCTTGGTCATGTTTGAgattttggatttctttttccATCTC
TAAACACTTTATCTGGTGtttcagattttctttttccttgtCTTCTCTCA
ACTTTGCATTTTCTTGTTTAAGtctttgaatttcttccctCGGATCCATT
CCTCGATCGACTGCGCAGTGTGCTTCGTTCATTGTGATTATGATTAAAGT
TTCTCCACTTTACTTTTTTACGTACAACTTTCACTTCTATCTAAATTATC
GTCAATCATGAAAAGTTTTCGATATCAAAGGTTCAAACCCCCCTATGTTT
AAAAAATCTACAACTTTCCTGTACATATAATGAATTGTGTTTTCAAGTAT
ATTGGCTAAAAATGCCTTCtaataccactatttattacctATTAAATACA
AAATTAATCTTTCAATaccattattttattttatttgttatcTAATTAAT
GTGCATTTAGCATCGACAAGTATTTTGAGTATTTGTTATTAGAAAATGTA
TGGTTTTCGATCcgaaattttttaacaaaatctagAACTAGAGTCGTTGT
TGTATAAAAGATTATTTACTCGAAATCGATTTTTTCCAGAGCGAAGCCTC
ACTCAGAtatgaacaattttataaaggACCACGAGGCTGAAGTTTTGCAG
AAACTTAAGAACATTCTGAACGACGAGGCTTAAGTTTTGCCGAAACTTAA
GAACATTCTGAACGACGAAttataaagttttaaaataagaaatcgaaata
ataagaacaagtgaggttaagtcaaaattttcaaaatttaatccaGTTCA
TCTGATTTCCACTCATAGATATCTTTCTTTCACCATGTTCTTGAACGATG
TCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTTCAAA
GTGAGTTCAAAATGTTATTTTAATCCACAAGAGGATATAGAAGTCATTTG
CTATGAAAGTTTGATTCGAGGCAACCAAAAAAAATTGCCGATCCAGAAca
ctactctgatacaagagtgtgggtgatatgccagacattgtggtgtgtgg
TTTTACTCATCCCGTTCTGTGCCTGAGACGAGCTATATGCTCTCCCGCGT
AGTCCAAGTGTCACCACTATACATCATGGTATCTGTGTCTCGCCTGCACA
GAACCAGCGGTGTCTGGACAGTGCTATGCATTCCTACTTGAGAAAGGAGG
AAGGAGTAGTATCCATTCCCCGATGTGGAGGACTCTTATCATTGTATCAA
CAACTGCGAAAAAGTGTGAGTCCACGCAAAATGGAAGCTTGGATGCTTGA
TAGGCTGTAGATCTAGAACGCCATCGCTTAATTAAAGTTGTTTGATGGTT
GTTTTTTGAATACATTCAACTACCATTGATTTGTTTTCAGGACATCATGA
AAAATTCTGGTGAATGGCATGGCTATTATCTATACTCCAAAACCACAGGC
AGTAGAACATTTTTCACCGTCGACATGCATTTCACACCAGGAGAAAACGA
CAATGGAACTTTCAATGCGTCTGGACGTGAAAATGGTGGAGAGTTCGTGT
TCCGTAATGCGGTAATTGAAGGTATTTAAATGATTTTTAGGACTTTAGAG
TTCACTTTgtcaacaatttaaaaaaactagaccatagatttataaagccc
gaagggctagatgtcctGAGATGTCGTGCTTTTTGTCGTGAGGTtaagta
ggaaatcctacctaggtcacgtgatattacaatagaatttcagcgcttga
ccaagaAGAAGCTCTGGcagtcaagaacaccttcaaattagcctatcata
gactgattagcctatcataggctatttagactattttatataggctattt
agccgaaaatcgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTTCTGATAATGAAGTTCTGCTGAATCGACA
AAAAGCCCGATTTTCTTACCCTGCGCATGCGCACGCATGCGCAGTaccaa
aaagtggaatatttcctaaaccaaaactgacccaaagtcaaaatttgtca
tgagcatttctctgacaatgagaaaccatgtattccttagagaagacgcg
actatttatatttcgtcataaatcgaggtttttatcgattttcggctaaa
tagcctatataaaatagtctaaatagcctatgataggctaatttgaaggt
gtcctTGACTGTCTgggggttttcgaaaacaatagcagcaatattatttg
cgatattcacttttttcttttgcttggaagagcttaaagcacgacaccTA
GCCCTTCGGGATTATTTTACGGGATTTTGTCGATGTTTTATCTTTTAGCt
agaccactgacctttataaagcATGGACAAAGCTATATCTACCATCTTTG
ACTACTCGATGTGGGGTCAATTTatatttcaatgaaatttaCTGCGTTTA
ACAAAGGTTTCCACCCACCGAAAAACTCTGATAAAAAATTTGAGTGACTG
TGTCCAAGCAATATAAAGGTCAGTAAGCTAGACTCCTTTGTAGTGTAGTC
TTGAACAACTTAAActaacaaactttaaacatactgaaatgaaaatcaaa
atcaaaaacaacaaactttGTCTCTTTATTGTGTTATATTTTCACCGGGA
TTTTCGCTTCCTTGACGTTAGAAAAATGGCGTCTGAAATATATTGGCAAA
AAGTGAATTCGTCTCGATTTCATGCAAAATTCTGATGCTATTTCGTTTGA
AACTTTTGCCTGTGGCATTTTCAAATTATATCACCTtttcttttaacatt
ttcttttaacTGTCCCTTCAACATTTTGACCATTTCTATCATAGACCGTT
TCACGGTCGAAATGAATTATGGGTAATCATGACTGATTAAATCAACGACT
TCTCTTTAACACAATCAGAATTTTAGAGCAGCGCAACAGAAGGATGCAAT
GAAACGCTGTGGTCCTACTTACCCATGATTCCTTCGACCGTGAAATGACG
TATATAAGTAAGTCCGATTGGGAAATAtagaccacagatatcttataaaa
cactagataaagCTACTCTATCCTGCTTTACCAAGCTAAGGAGGGAAGCA
AAATAATACGCCATCTTTGCTGAGAGTAGGTCACAGTAGAAGCCCAGGTT
TTCACTGTTGAAGTTTTTTTGActctgcaatgacttcaaaatttcaagga
tcGCGCAAACGAAATTGTGACGTCAGTTTATTCAAGATAGCGCGTCATTT
TGCTTCAAATAGGGATTAAGAGGAAACTCTATCGAGTgctttatataaga
tatctgtggaaGAGACAGGATCTCCCACTTCAAGGACATTCTTCTTTCGC
ATCTAGGAGAAAcggtgaaatttgaaaaagtttacaaacCATCCGAAGCT
GAAGAGACTGGAAACGAACAAGGGATTCGTTACCATGGAAAGATCATTGA
ACAGACACAAATCATGGGATATTGGTGGGTTCCTGGCAATCAACGAATGA
ATGGCCGTTTCTTCATGTGGAATCGAGAGTTTGAGGTACGTCTTttacgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttctcAGCT
CTTCTTGGAGgaatattggaaagatattcccaattcaaaatttcgtgtca
ttataagcattttgtttgattttactcgtctgatgatttttttctcacac
accagatttcataactGTGTCCGTTTGGTATTCTGGCAttattgttttca
aacttttggccagcaaaagtacgaatagaaaaagttagagaactttttag
aaataagagtatttatcatttttcaaaatcagagtccttcgagccgccat
gacagttgtcctttgcggacaaagcctgtacattgattgttttctgaaac
aatagaaagacaatacttcgctctccagtttcattcgatgtttatccaga
gtctctataataaatccatgatgTGACGAagcctaatttttgaaaaagaa
aaattcttggTTCCCACATTTTCTCAAGGCCTTATTTATCGGTAGTTtag
ctttctctgaaatttaACCTGTGGAGACGGACTATAAGAATTTCATTGCG
CATGTCTCAATCATAAATGACACGACCTTCAACCAAGATTCTGGGTGATT
CCCATGGCAACTTTTGTCTTCGTTAAATGTGCTTTGAAAAGAATATCTGT
CGTCACAGTgtactttttttcttctatttggttgagtcgcaggaggcttt
gaggcccattttcgcaactatagacgctttcaattNATTGAGTCGCAGGA
GGTTTTGATGCCCATTTTCACAACTATAGACAGATAGACGCTTTCAATAA
Gctccccgtcagcaccttgaactaactacccaattcccctcacatggcat
gggttgacccgggcgaaggttcattcacttgccaagtgaaccgctgcgag
tgggaatcgaacctcagttgcctgtgcagcaaccaaggtcaatgaccact
ataccacagcgcctgtACAATTCACACACTGTGAAGCTCATTATGCTAAA
TCAATTTCTTAATTACCAGTATGTGCACAATTTactatcattaaaaaaaa
attaaatccgcTTTTTTGTCAGCCATAGTTTCCTCCCCCTTTTCTGCTAG
GGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggg
gggggggggattttttggaaactttttgccaaagaaggggggggggagaa
aaaaacatatagtctgaatcacagacctctatagatataggTACTTGCTA
TAAGAAATCTTTTCGATAGAGGATGAGCATAGGCCTGACCTTCAAATAGA
CCCTGGAGGCAGTTTTTCGGCcctggccaagcaaaatctttagATCGGGG
TTTCTTTGAAAGGGTACcttaccctaatggtagcactattAGTATGCATC
GATACTACTTGTGATGCAGTGCTACTTCGATAGTTTCTGTATGTGGCTCC
cacgcaaatttttttccgtacatggaAAGTATCATCGAtggtcgggagta
tctcatattttttgtttggttttgttgtttggaattgcttaggtcagggt
tgctagtaacggctcgaatttcagtcaggttaaaaaaggggcaattttac
ccatattataataacattaccccgtcttttttgtcattataTAAGTATTT
CCTAATGttgtgttctgctgtgcgagtgtggctcaacggatagcgcgctg
ggtttctgatcagaaactctttcatttggtgggttcgaaccccggtcggg
tctatatttcaaggtttaagataagtttaagatactccggcccgtcgatg
atactcccgaccgtcaagatgagatactcccgaccatgtacggaaaaaaa
tttgcggcTCCCACTTTTAAAAAAcaccaatcaaagatggcgcatAAAGC
TCTGTCCATGATTATAAAGACCAGTGTTGTCATCCCGTTTAAAATGATAC
CGTTAATCATATTATTTATGCCCCCTTTTTCAGATTTACTCCGCCCGCGC
GGTCGACCAATCAAATCGAAACGAAGGTTGTTTGAAAGCTCCTTTGAAAA
TCAAACCGAAAAAAGGAAAAGCTGTTTTCTGGTACAACCATCATTTGAAC
CCCCTGAATGATATGGTTGGACCTTTAAATCATGAGGCGATTTTCGCACA
TTGTGAAGTGAACCAAGGGGTCAAATGGACCGCGTCTGGTCGGCTAAATA
TCATCGGAGATGGAGAGCTTAAATTACGTACGTGGAGAAGAGGAACTAAT
TTAATGCATGACCGGAAAAAAATGCGGAAAATTTATCAGCGGTTAGGAAC
GAACGAACCAAAGCGAGAAATCGAGGAATACGAAAAAGACTTTTATGAAG
AAATTCACGGTAAAAAAACTGGGAATGATTCTGCAAAGGATTCTGGGTAT
AAATATAAACAATCGAGTAATGCATTGCAAGCGTTGAACCTGTTGGTGAA
CGATTTATCGAATGAACAATTATCCATAATGGCAGCCAATGTGCATCGCA
TTTTAGGCCTGCAGTGTATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010080XLOC_010080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017976-exon-sc0000282-1491911889:122561..122580TCONS_00017976-exon-sc0000282-1491911889:122561..122580Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:122561..122580TCONS_00017976-exon-sc0000282-1510915933:122561..122580Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:122561..122580TCONS_00017976-exon-sc0000282-1575043694:122561..122580Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1491911889:125403..125496TCONS_00017976-exon-sc0000282-1491911889:125403..125496Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:125403..125496TCONS_00017976-exon-sc0000282-1510915933:125403..125496Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:125403..125496TCONS_00017976-exon-sc0000282-1575043694:125403..125496Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1491911889:125993..126176TCONS_00017976-exon-sc0000282-1491911889:125993..126176Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:125993..126176TCONS_00017976-exon-sc0000282-1510915933:125993..126176Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:125993..126176TCONS_00017976-exon-sc0000282-1575043694:125993..126176Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1491911889:126589..126762TCONS_00017976-exon-sc0000282-1491911889:126589..126762Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:126589..126762TCONS_00017976-exon-sc0000282-1510915933:126589..126762Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:126589..126762TCONS_00017976-exon-sc0000282-1575043694:126589..126762Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1491911889:129229..129310TCONS_00017976-exon-sc0000282-1491911889:129229..129310Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:129229..129310TCONS_00017976-exon-sc0000282-1510915933:129229..129310Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:129229..129310TCONS_00017976-exon-sc0000282-1575043694:129229..129310Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1491911889:129801..129981TCONS_00017976-exon-sc0000282-1491911889:129801..129981Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:129801..129981TCONS_00017976-exon-sc0000282-1510915933:129801..129981Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:129801..129981TCONS_00017976-exon-sc0000282-1575043694:129801..129981Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1491911889:132517..132695TCONS_00017976-exon-sc0000282-1491911889:132517..132695Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:132517..132695TCONS_00017976-exon-sc0000282-1510915933:132517..132695Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:132517..132695TCONS_00017976-exon-sc0000282-1575043694:132517..132695Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1491911889:134794..135334TCONS_00017976-exon-sc0000282-1491911889:134794..135334Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1510915933:134794..135334TCONS_00017976-exon-sc0000282-1510915933:134794..135334Clytia hemisphaericaexon
TCONS_00017976-exon-sc0000282-1575043694:134794..135334TCONS_00017976-exon-sc0000282-1575043694:134794..135334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:122561..135334 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0726311	0.0616002	0.0460132	0.039925	0.394624	0.376353	0.780784	1.35931	0.223345	0.153786	0.655312	0.41718	0.398106	0.345501	0.300971	0.624782	0.622087	0.532259	0.047528	0.0479718	0.364767	0.2377	0.169877	0.168515	0.31011	0.358521	0.0557429	0.0305707	0.107819	0.0887032
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017976 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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