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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017839 ID=TCONS_00017839|Name=TCONS_00017839|organism=Clytia hemisphaerica|type=transcript|length=1337bp
ttttacttttttttgataTCAGTCATAGGGATTTACTTCAAGCAGACATG
TGTATGTTTTACaagattaaaatatttcaacaaaaatactttttgtaaCC
AACTCGTATTTTACAGTTATTCAAAGCTTTTGGTTTTAGTATGGGAGGAT
GTAAGAGAAAGAGGAGTTTGGAGACAATAAGAAAATGGAAAAGAGAGTTT
AAAGGTGGATGACGAGGAGCTGTAACAATAGAATAAATATGTTTGATGTG
AAGGAGATTTTGGTGATCGGACACTAACTAACAGAGATTGTAAAGATTTT
CTAAAAGTTTGGATGATACAGAAGTTCTGCTCATTAAAACTGTGAGGGAC
GCACGGAGGTCacaaacaccgaaataccgacgcacGGAGGTCATAAACAC
CGAAATAGCGACACACGGAGGTCATAAACAACGAAATACCGACACACGGG
AGTAACAAACACGGAAATACCGACGCACGGAGGTCAtaaacaccgaaata
ccgacgcacGGGAGTCACAAACACGGGAATACCGACGCACGGAGGTCAta
aacaccgaaataccgacgcacGGGGGCCacaaataccgaaataccgacgc
acGGAGGTCacaaacaccgaaataccgacgcattTTTCTTGAATCACCGA
CAACACCAGCAACAACGATTGTtaaaatccttattttgtcaCTTTTGTGA
CCGTGTGCAACTTGACACCGAACTACCGTCACCTTTTTCGTCAAACAACA
AAACACGTCATATGTTTGCTCTAGCCAATCACGATAGGAGATCAAAGCGG
TCCACCAACCTGAAAGATTCTCTTGCGAAGCCATGGTCTTTAGATGGCAT
ACGTGCCACCGCGGAGTAGTAAGAGTCTGTATGTCAATGTACATTCCGAA
ACTATCTTTACCacaaaaaattgttcgattcaGAGATAAAGTTAAGAGAA
AGTATGTTCACATCAAGCTGTGCTGTTTACAAGAAAAACGGCAGGGTTTT
TTAAATCAAACGACCAGCTAAACACTGATTGATATCGGTAAATTCCGcag
aaatcaaaatattgagcAAATTTTCTGAAAGATAGATGtgtgttttcttt
gttttgttttcatcttcttttgaAGGCAAAAATGTGGCGTCATGATATTT
CGTTTCCATGTTTTCAAACTGGAGAAAACAACAAGTTCAACAAAACAATA
TTTACCAGTCCTCTGAACAAACGTGCTAAACATACAGATAACAATTTACT
CTAGTGTAGTCAGTTTTACACGAAGTAAAGATAAAGGGAAGGACATTTTA
AagttaaaatctttaaattatCCAAAAAGAAGGTTTT Run BLAST on NCBI transcript from alignment at sc0000278:196876..198212+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017839 ID=TCONS_00017839|Name=TCONS_00017839|organism=Clytia hemisphaerica|type=transcript|length=1337bp|location=Sequence derived from alignment at sc0000278:196876..198212+ (Clytia hemisphaerica)
ttttacttttttttgataTCAGTCATAGGGATTTACTTCAAGCAGACATG
TGTATGTTTTACaagattaaaatatttcaacaaaaatactttttgtaaCC
AACTCGTATTTTACAGTTATTCAAAGCTTTTGGTTTTAGTATGGGAGGAT
GTAAGAGAAAGAGGAGTTTGGAGACAATAAGAAAATGGAAAAGAGAGTTT
AAAGGTGGATGACGAGGAGCTGTAACAATAGAATAAATATGTTTGATGTG
AAGGAGATTTTGGTGATCGGACACTAACTAACAGAGATTGTAAAGATTTT
CTAAAAGTTTGGATGATACAGAAGTTCTGCTCATTAAAACTGTGAGGGAC
GCACGGAGGTCacaaacaccgaaataccgacgcacGGAGGTCATAAACAC
CGAAATAGCGACACACGGAGGTCATAAACAACGAAATACCGACACACGGG
AGTAACAAACACGGAAATACCGACGCACGGAGGTCAtaaacaccgaaata
ccgacgcacGGGAGTCACAAACACGGGAATACCGACGCACGGAGGTCAta
aacaccgaaataccgacgcacGGGGGCCacaaataccgaaataccgacgc
acGGAGGTCacaaacaccgaaataccgacgcattTTTCTTGAATCACCGA
CAACACCAGCAACAACGATTGTtaaaatccttattttgtcaCTTTTGTGA
CCGTGTGCAACTTGACACCGAACTACCGTCACCTTTTTCGTCAAACAACA
AAACACGTCATATGTTTGCTCTAGCCAATCACGATAGGAGATCAAAGCGG
TCCACCAACCTGAAAGATTCTCTTGCGAAGCCATGGTCTTTAGATGGCAT
ACGTGCCACCGCGGAGTAGTAAGAGTCTGTATGTCAATGTACATTCCGAA
ACTATCTTTACCacaaaaaattgttcgattcaGAGATAAAGTTAAGAGAA
AGTATGTTCACATCAAGCTGTGCTGTTTACAAGAAAAACGGCAGGGTTTT
TTAAATCAAACGACCAGCTAAACACTGATTGATATCGGTAAATTCCGcag
aaatcaaaatattgagcAAATTTTCTGAAAGATAGATGtgtgttttcttt
gttttgttttcatcttcttttgaAGGCAAAAATGTGGCGTCATGATATTT
CGTTTCCATGTTTTCAAACTGGAGAAAACAACAAGTTCAACAAAACAATA
TTTACCAGTCCTCTGAACAAACGTGCTAAACATACAGATAACAATTTACT
CTAGTGTAGTCAGTTTTACACGAAGTAAAGATAAAGGGAAGGACATTTTA
AagttaaaatctttaaattatCCAAAAAGAAGGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017839-exon-sc0000278-1491911889:196876..198212 | TCONS_00017839-exon-sc0000278-1491911889:196876..198212 | Clytia hemisphaerica | exon |
| TCONS_00017839-exon-sc0000278-1510915933:196876..198212 | TCONS_00017839-exon-sc0000278-1510915933:196876..198212 | Clytia hemisphaerica | exon |
| TCONS_00017839-exon-sc0000278-1575043694:196876..198212 | TCONS_00017839-exon-sc0000278-1575043694:196876..198212 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000278 | supercontig | sc0000278:196876..198212 + |
Blast
The following BLAST results are available for this feature:
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