TCONS_00017785 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017785
Unique NameTCONS_00017785
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017785 ID=TCONS_00017785|Name=TCONS_00017785|organism=Clytia hemisphaerica|type=transcript|length=2559bp
ACAGATTGTGTATCCAAATACACATACATACATACTCGCATGACACACTG
AAACAAATCTACATCAAAACACATCCAAagTAGGAACAAAGCATCATGGC
AAGACATCCAAAGAGAAAAGCGGGGAAGTACGGAGCTCGTCAATACCAGA
CAAAGTATGACCCAAACGATGGGACAATGGAGAGGGCGTTAACAGAAATC
AGGTTGGGAAAAAAAGTCAAAGATATCGCGCTAAAATATAAAATCCCACG
GTCCACTCTGTATGACAAAATAAAAGACAATCACCCAAAGAAAGTTGGAC
GCCCGACCGTGCTCAGTCATGATGAAGAGAAGGCACTGGCTTCAATGGTA
GAGCTGACATGTGAGTGGCAGGTACCCATGGACAGAACAGACCTACGATA
CTTTGTGCAAGACTACCTAAACAAAAAGGGCGTAAAGTTGTTCAGAAATG
AAAACCTCCCCAGCATGGATTGGACCGAACGCTTTATTCGTGACTTCAAA
CTCAAACTACGAAGTGTAGACAACGTCAAACCGAACAGAAGTGGGTTAAG
TTTGGAAGatgtaaacaaatttttcatcaaTCTGGAAAAAGAACTCGACG
GGGTACCGCCAGAGAATATTTGGAATTTTGACGAGACTAATTTCACTGAC
GATCCAggaaagaaaaagGTCATTGTATCTAAGAGGAGACGGAGAGTTGA
ACGATGCATGCCTCACTCGAAAACTTCATTTTCAGTCATGTGTTGCGGCA
ACCCGAAGGGCGAGTTCATGCCACCCATGATTGTATATAAATCGAAATGT
ATGTGGGAAAACTGGAAGAAACACGGGCCAAGAGGTGCTTCGTATACTAT
GAGTAAAAATGGTTGGTTTGAGGCACAATCCTTCACCAAATGGTTTATGG
ACCTAGCGTTACCACGTCTAAAGGAGTTGACTGGAAAGAAGGTCATCATT
GGTGACAATCTTGGGTGTCATTACACTGCTGACGTCTTGATTGAATGCCG
CCGTCACAACATTGCATTCATTCCGCTCATTCCGAACACCACCCACATTT
CACAACCCCTTGATGTTGCCGTTTTCTCCCCAGTAAAGAAGTTTTGGCGG
CAAAGCTTGGAGGCATGGAGACGGGAAACCAGAATTAAGGATGACTTACA
AAAAACGTGCTTTCCGGCAATTCTAAGGAGTACTTTTATCAGGATAGAAC
GCGAGCTTGGAACTGCCCTAGAATCTGGATTTCGAACGTGTGGCATTCAC
CCACTGGACCGTACTAAGATAGCAAAGAAGATACCTTCACGTGTTCATGT
TGTTGATGGCTTTGATTTAAATATATTCAATGATAGTGTTCTAGACTTTC
TCGAAAACAACCGAACATGTTCTGTAACCAGTGAGTACAcgttcttataa
gcatatttcctttttttaaacagACTCGGTTACGCCTAGCTATATTGTGA
ATTGAATTCTTCCGAAAAAAGGGAGTCATTAAAATGGAAAAGATAAACGA
AAGTTACACCCAAGTATACACCAATCATCAAGCTTACAGATATGCTTATT
TGTTCACCAAATCCACTACAAAGATTTTAACCCGGGTGGGGAGtgttact
taggcaaaaatgagtgctgggtatgtgcgtggCTTAAGGtcggtcggttt
tttcaccttccaaagtctctcgaagggtcggaaaaatcagaaagttttaa
atcagtctctctaaggtgacccttagagagactaatttaagaCTTTCTGA
TTTGTCAGCAAATAGCAATCTCTCcctcaaccctagtaccccccccagGA
TTTTAACAGTCGGTTTTGTCCTCGTTAAAAAGATGGAAAACCGGTCGTTG
ATGTCACACAATGGAAAAATCTTGCTCTTCTTGAAATACTTGAAATGACA
ACTGTTTTCTCCCTTATACAAACAAACCAGAGGCAAGAAATGTGAGCCTG
GCAAAAATGCTTGCGACATGCTGGATACCCAGGCGGCTACAACTACTGAA
GTCCTTGAGGTTTCACAGCAACCAGCACAGACCCAAGCACAAGCCAGTGT
GGACGATGGTGAACAACCAGGGCCATCGAACGTCATCAATGACAGAGAGG
TTGATACAGACACTGATGATAGTGACGTCGAAGAGCAATTGACATTGGAG
CTAGAGGAAGCCCTGGCCGCACAATCGGATGAAGATGAGGATGAGGAATA
CTTCAATATAGAGGAAGAGATAGATGAAATAGAAATAGAGGCAATCGAAA
ATCGTGCGGCAAAAGAAAGAGNGGAAGCCCTGGCCGCACAATCGGATGAA
GATGAGGATGAGGAATACTTCAATATAGAGGAAGAGATGGATGAAATAGA
AATAGAGGCAATGGAAAATCTTGCGGCAAAAGAAAGACAACAGGCCGAGG
AACAACTCCCCACAGATACAGTAGAGGAAACTGAGGAAATGACGCAGGAA
GAGGACGGAGATGGCATCAGCTGGGTGTGTCCAGGCTGCAATATCGGTTG
GAACAGCGACACTGCTTCTGAAATCTGGATAGTATGTGATCAAAAATGTG
GCCGGGCNN
Run BLAST on NCBI

protein sequence of TCONS_00017785-protein

>TCONS_00017785-protein ID=TCONS_00017785-protein|Name=TCONS_00017785-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
MARHPKRKAGKYGARQYQTKYDPNDGTMERALTEIRLGKKVKDIALKYKI
PRSTLYDKIKDNHPKKVGRPTVLSHDEEKALASMVELTCEWQVPMDRTDL
RYFVQDYLNKKGVKLFRNENLPSMDWTERFIRDFKLKLRSVDNVKPNRSG
LSLEDVNKFFINLEKELDGVPPENIWNFDETNFTDDPGKKKVIVSKRRRR
VERCMPHSKTSFSVMCCGNPKGEFMPPMIVYKSKCMWENWKKHGPRGASY
TMSKNGWFEAQSFTKWFMDLALPRLKELTGKKVIIGDNLGCHYTADVLIE
CRRHNIAFIPLIPNTTHISQPLDVAVFSPVKKFWRQSLEAWRRETRIKDD
LQKTCFPAILRSTFIRIERELGTALESGFRTCGIHPLDRTKIAKKIPSRV
HVVDGFDLNIFNDSVLDFLENNRTCSVTSEYTFL
Run BLAST on NCBI

transcript from alignment at sc0000276:329962..335448+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017785 ID=TCONS_00017785|Name=TCONS_00017785|organism=Clytia hemisphaerica|type=transcript|length=5487bp|location=Sequence derived from alignment at sc0000276:329962..335448+ (Clytia hemisphaerica)
ACAGATTGTGTATCCAAATACACATACATACATACTCGCATGACACACTG
AAACAAATCTACATCAAAACACATCCAAaggtaagaaaattttatttatc
cTTTTAAATTTACATGTAAATTATTAGCTATAGCTTTGGGCTGAAATGTT
TATTTTAGTGGGTCAATCATGTTTTCGTGACATAAGCCACCCCTGTTTCA
GTTACACTTAATTCTACCTAAATTGCAGGGCCTGTATATTTGTTGTGGAT
GTATGGGCTTATTTCACTTAGCCTGTACCGATAAAAGTATTGGGGATTTG
AAAAGAGTTTTTTATTGTTACCTGATTCCAGGGCAAACCATGATCTAATA
CATACTTTGCAGAAACCCATGTCTATCATCCAGGTGTAtggatattttct
tttttctttgttagcCTGTCCTCCAATAAATTATAGCGCTTACATGTTGT
cttacaaaaatttaatttgggcACCACAAGTGAAGTTTGTCCCAAATGTG
TTTTGGTAATTTTGTAATCCACTATATCTTAACAAGTTGTGTACAGTCAG
CCTGTAATACAATGCTAAAGGTGAGGCGTTCCCTTGGGACGGCCTTGATC
AGTCGCAGTGTGTTCGTGCCGCAAGGGAATAAGAGTGCCGGTGTAATCGA
AAGTGACCGACTCTTCTGCGTGGCGCGAACGACCATTGTCGTTCTCTCAT
ACGTAGCACGTTCACACGCTATGATTAATCAAGAGCCATCGAGCCAATGC
TGGCAAAAATGAATGGACACAAATTCTTTATGATTTATCTCCATTGTTGC
AGCAATATAACAAAACTATATTTCCTTTGCAGTAGGAACAAAGCATCATG
GCAAGACATCCAAAGAGAAAAGCGGGGAAGTACGGAGCTCGTCAATACCA
GACAAAGTATGACCCAAACGATGGGACAATGGAGAGGGCGTTAACAGAAA
TCAGGTTGGGAAAAAAAGTCAAAGATATCGCGCTAAAATATAAAATCCCA
CGGTCCACTCTGTATGACAAAATAAAAGGTAATATTTACGATACCCGAGA
AAAAGAGGGAACTTATTATAAGGATttcatttaagggctctgaccatagt
cggtaaattgattttagtatttgaacataacaGTTATATCTTAGGTTCTT
TAagacttttaacaaagaattgcctttataaatttataaaatttgccttt
ataaaattattttcctcTGCATACTCTCAGACAATCACCCAAAGAAAGTT
GGACGCCCGACCGTGCTCAGTCATGATGAAGAGAAGGCACTGGCTTCAAT
GGTAGAGCTGACATGTGAGTGGCAGGTACCCATGGACAGAACAGACCTAC
GATACTTTGTGCAAGACTACCTAAACAAAAAGGGCGTAAAGGTTAGGGAA
ATATTCTGATGTGTTTTTAGGGGAAATGAACTGCCAGAATTGTGAAGAAT
TTTATTAAACCAATTTAcattattatgtttttttataagcattgaagTTA
TAAACATCTAGAATCAGTAATGGCAATAATTTAAGCATATACTAGGCATT
TCTCGAGACTAAGAAAATTATCCTGATTTGGGCTGGGTTTCACGGATTTT
TCCTAACATTTTGCTCGGGGTATAAGCACTCTTACGAACAGTATTCGGCC
TTGCCACGCCCTCAACCTAGGCATCGCTGAACCTATACGCTTATATAAAA
CATGTATATATTGTCTTACAGTTGTTCAGAAATGAAAACCTCCCCAGCAT
GGATTGGACCGAACGCTTTATTCGTGACTTCAAACTCAAACTACGAAGTG
TAGACAACGTCAAACCGAACAGAAGTGGGTTAAGTTTGGAAGatgtaaac
aaatttttcatcaaTCTGGAAAAAGAACTCGACGGGGTACCGCCAGAGAA
TATTTGGAATTTTGACGAGACTAATTTCACTGACGATCCAggaaagaaaa
aggttaaaacATTTCTGAATTATTGATCAAATCTGACCGTTTTTTACATC
AGAAAAGGTTTTTTAACCCCTTCTCCTGTGACCCAAATGCAAATTCGTAC
CTTTTCAGATAAAATCAGGCAAATAACCAAATATAGGGATTTATAATCTT
CGGTTTTACAAAGGTGGAGATTTTATACTCAATTCCTAATCATAGGTTAa
ctaattttatcaaaagtttaaTTGAATTCTCGTACCTTTTGTGTAACTGT
AGATGTTAGTATTCGTGTCAGAAAGTTCAGGATTACATTGATGTTCAATT
TTTTACTTAGCTAACCTAGCTAGCCCATTAAGATCTGACCGCGTCCATTA
CACAGGAGTCTTTTTGGATTGTGAGCACCATATCTCTGTTTCACAGGGCA
CGCTAATTAACTTTATCGACATATATTATCTCGTCCAGGTCATTGTATCT
AAGAGGAGACGGAGAGTTGAACGATGCATGCCTCACTCGAAAACTTCATT
TTCAGTCATGTGTTGCGGCAACCCGAAGGGCGAGTTCATGCCACCCATGA
TTGTATATAAATCGAAATGTATGTGGGAAAACTGGAAGAAACACGGGCCA
AGAGGTATGTATGTTTCTATGTAGTAACTGACTCCTCCTATTTCATATTC
GTCAACAATAAGGTTTTTTGCGTAGTTATTTTACCGTTCACATAGCCTGC
CTTAGCATTGATTTACAGACAATACCTGAGTGACTTAATTGTGggctatc
cccattgaaaattcaatgaaaaaaattggactccaaaaccatccccactg
taaattttgagctggaaacaatagattttctatccatATTGGgctttcga
tagaaattttcatccccaccgtgggaaaaggttccaccggggcactgaga
caggggtgtattatagtggaaataacgtcttatcacattACTCTAAGGTG
CTTCGTATACTATGAGTAAAAATGGTTGGTTTGAGGCACAATCCTTCACC
AAATGGTTTATGGACCTAGCGTTACCACGTCTAAAGGAGTTGACTGGAAA
GAAGGTCATCATTGGTGACAATCTTGGGTGTCATTACACTGCTGACGTCT
TGATTGAATGCCGCCGTCACAACATTGCATTCATTCCGCTCATTCCGAAC
ACCACCCACATTTCACAACCCCTTGATGTTGCCGTTTTCTCCCCAGTAAA
GAAGTTTTGGCGGCAAAGCTTGGAGGCATGGAGACGGGAAACCAGAATTA
AGGATGACTTACAAAAAACGTGCTTTCCGGCAATTCTAAGGAGTACTTTT
ATCAGGATAGAACGCGAGCTTGGAACTGCCCTAGAATCTGGTTAGTATGC
ATTTTTATATATGATAGCGgttgattttcataaaaatgccttttttatgg
gacaagctggagtttttactagctcttatttgatttggttggttgttaag
atgtaataaaagaatcttattaccttttctaaagaacgcgtcatctctat
cgcTTTacatgaccaattattaaagtatcttgtaaaaactccaaggcatc
tcttTTTTATGGAGACTTGATAATTTTCCCGTCAGTGATTCTTACTTCTT
AATTGGACGTGCAAATACAAATTATTTTTGGGAGTCAACGTAATGAACTT
AGAGTTTAAAAAGATACGACAACGGTTTATGCCGACGGGCCGGATAAATT
GTGGATTTTTGAGTGTTAAATTAGGGTGAAATTTGCTCTTCTACCTTCGT
CTAATGAAGCCATGAACAGTCGATATCACATTTTCATGAATTCTATCATT
CCACGTCATTTTAGGATTTCGAACGTGTGGCATTCACCCACTGGACCGTA
CTAAGATAGCAAAGAAGATACCTTCACGTGTTCATGTTGTTGATGGCTTT
GATTTAAATATATTCAATGATAGTGTTCTAGACTTTCTCGAAAACAACCG
AACATGTTCTGTAACCAGTGAGTACAcgttcttataagcatatttccttt
ttttaaacagACTCGGTTACGCCTAGCTATATTGTGAATTGAATTCTTCC
GAAAAAAGGGAGTCATTAAAATGGAAAAGATAAACGAAAGTTACACCCAA
GTATACACCAATCATCAAGCTTACAGATATGCTTATTTGTTCACCAAATC
CACTACAAAGATTTTAACCCGGGTGGGGAGtgttacttaggcaaaaatga
gtgctgggtatgtgcgtggCTTAAGGtcggtcggttttttcaccttccaa
agtctctcgaagggtcggaaaaatcagaaagttttaaatcagtctctcta
aggtgacccttagagagactaatttaagaCTTTCTGATTTGTCAGCAAAT
AGCAATCTCTCcctcaaccctagtaccccccccagGATTTTAACAGTCGG
TTTTGTCCTCGTTAAAAAGATGGAAAACCGGTCGTTGATGTCACACAATG
GAAAAATCTTGCTCTTCTTGAAATACTTGAAATGACAACTGTTTTCTCCC
TTATACAAACAAACCAGAGGCAAGAAATGTGAGCCTGGCAAAAATGCTTG
CGACATGCTGGATACCCAGGCGGCTACAACTACTGAAGTCCTTGAGGTTT
CACAGCAACCAGCACAGACCCAAGCACAAGCCAGTGTGGACGATGGTGAA
CAACCAGGGCCATCGAACGTCATCAATGACAGAGAGGTTGATACAGACAC
TGATGATAGTGACGTCGAAGAGCAATTGACATTGGAGCTAGAGGAAGCCC
TGGCCGCACAATCGGATGAAGATGAGGATGAGGAATACTTCAATATAGAG
GAAGAGATAGATGAAATAGAAATAGAGGCAATCGAAAATCGTGCGGCAAA
AGAAAGAGNGGAAGCCCTGGCCGCACAATCGGATGAAGATGAGGATGAGG
AATACTTCAATATAGAGGAAGAGATGGATGAAATAGAAATAGAGGCAATG
GAAAATCTTGCGGCAAAAGAAAGACAACAGGCCGAGGAACAACTCCCCAC
AGATACAGTAGAGGAAACTGAGGAAATGACGCAGGAAGAGGACGGAGATG
GCATCAGCTGGGTGTGTCCAGGCTGCAATATCGGTTGGAACAGCGACACT
GCTTCTGAAATGTGAGTGTCTGCACCCTGTCTATATAAACTCGTTAGAAA
TATTTCAACCCTTTGGCATTTTCGTTTTACAATATAATTGACAATAAGAT
TAGTAAAGTGTAACAGCTGACTAATTCCTTaagtacacccctgtgtcaca
agcCCATGATTAAATCTAGGATTAAATCTGAAATGACaggttttaacaat
tttggcgGGAGTATAGTATTTCAAACATGCTCCATTTGTTGGTACAGAAA
GTGTCTAAATTAAAACGTCACCCATTGATAGTAGAAATCAATGCTTATGA
TTTTTGGACGAAAAGGTTATAATTTATGGCTTCAAATACCTTAAACACAT
TTTGGTACTGTTTTTTTTGCGctcttatttttttaactctttGCTATTTC
AGCTGGATAGTATGTGATCAAAAATGTGGCCGGGCNN

Coding sequence (CDS) from alignment at sc0000276:329962..335448+

>TCONS_00017785 ID=TCONS_00017785|Name=TCONS_00017785|organism=Clytia hemisphaerica|type=CDS|length=7830bp|location=Sequence derived from alignment at sc0000276:329962..335448+ (Clytia hemisphaerica)
ATGGCAAGACATCCAAAGAGAAAAGCGGGGAAGTACGGAGCTCGTCAATA
CCAGACAAAGTATGACCCAAACGATGGGACAATGGAGAGGGCGTTAACAG
AAATCAGGTTGGGAAAAAAAGTCAAAGATATCGCGCTAAAATATAAAATC
CCACGGTCCACTCTGTATGACAAAATAAAAGACAATCACCCAAAGAAAGT
TGGACGCCCGACCGTGCTCAGTCATGATGAAGAGAAGGCACTGGCTTCAA
TGGTAGAGCTGACATGTGAGTGGCAGGTACCCATGGACAGAACAGACCTA
CGATACTTTGTGCAAGACTACCTAAACAAAAAGGGCGTAAAGTTGTTCAG
AAATGAAAACCTCCCCAGCATGGATTGGACCGAACGCTTTATTCGTGACT
TCAAACTCAAACTACGAAGTGTAGACAACGTCAAACCGAACAGAAGTGGG
TTAAGTTTGGAAGatgtaaacaaatttttcatcaaTCTGGAAAAAGAACT
CGACGGGGTACCGCCAGAGAATATTTGGAATTTTGACGAGACTAATTTCA
CTGACGATCCAggaaagaaaaagGTCATTGTATCTAAGAGGAGACGGAGA
GTTGAACGATGCATGCCTCACTCGAAAACTTCATTTTCAGTCATGTGTTG
CGGCAACCCGAAGGGCGAGTTCATGCCACCCATGATTGTATATAAATCGA
AATGTATGTGGGAAAACTGGAAGAAACACGGGCCAAGAGGTGCTTCGTAT
ACTATGAGTAAAAATGGTTGGTTTGAGGCACAATCCTTCACCAAATGGTT
TATGGACCTAGCGTTACCACGTCTAAAGGAGTTGACTGGAAAGAAGGTCA
TCATTGGTGACAATCTTGGGTGTCATTACACTGCTGACGTCTTGATTGAA
TGCCGCCGTCACAACATTGCATTCATTCCGCTCATTCCGAACACCACCCA
CATTTCACAACCCCTTGATGTTGCCGTTTTCTCCCCAGTAAAGAAGTTTT
GGCGGCAAAGCTTGGAGGCATGGAGACGGGAAACCAGAATTAAGGATGAC
TTACAAAAAACGTGCTTTCCGGCAATTCTAAGGAGTACTTTTATCAGGAT
AGAACGCGAGCTTGGAACTGCCCTAGAATCTGGATTTCGAACGTGTGGCA
TTCACCCACTGGACCGTACTAAGATAGCAAAGAAGATACCTTCACGTGTT
CATGTTGTTGATGGCTTTGATTTAAATATATTCAATGATAGTGTTCTAGA
CTTTCTCGAAAACAACCGAACATGTTCTGTAACCAGTGAGTACAcgttct
tataaATGGCAAGACATCCAAAGAGAAAAGCGGGGAAGTACGGAGCTCGT
CAATACCAGACAAAGTATGACCCAAACGATGGGACAATGGAGAGGGCGTT
AACAGAAATCAGGTTGGGAAAAAAAGTCAAAGATATCGCGCTAAAATATA
AAATCCCACGGTCCACTCTGTATGACAAAATAAAAGACAATCACCCAAAG
AAAGTTGGACGCCCGACCGTGCTCAGTCATGATGAAGAGAAGGCACTGGC
TTCAATGGTAGAGCTGACATGTGAGTGGCAGGTACCCATGGACAGAACAG
ACCTACGATACTTTGTGCAAGACTACCTAAACAAAAAGGGCGTAAAGTTG
TTCAGAAATGAAAACCTCCCCAGCATGGATTGGACCGAACGCTTTATTCG
TGACTTCAAACTCAAACTACGAAGTGTAGACAACGTCAAACCGAACAGAA
GTGGGTTAAGTTTGGAAGatgtaaacaaatttttcatcaaTCTGGAAAAA
GAACTCGACGGGGTACCGCCAGAGAATATTTGGAATTTTGACGAGACTAA
TTTCACTGACGATCCAggaaagaaaaagGTCATTGTATCTAAGAGGAGAC
GGAGAGTTGAACGATGCATGCCTCACTCGAAAACTTCATTTTCAGTCATG
TGTTGCGGCAACCCGAAGGGCGAGTTCATGCCACCCATGATTGTATATAA
ATCGAAATGTATGTGGGAAAACTGGAAGAAACACGGGCCAAGAGGTGCTT
CGTATACTATGAGTAAAAATGGTTGGTTTGAGGCACAATCCTTCACCAAA
TGGTTTATGGACCTAGCGTTACCACGTCTAAAGGAGTTGACTGGAAAGAA
GGTCATCATTGGTGACAATCTTGGGTGTCATTACACTGCTGACGTCTTGA
TTGAATGCCGCCGTCACAACATTGCATTCATTCCGCTCATTCCGAACACC
ACCCACATTTCACAACCCCTTGATGTTGCCGTTTTCTCCCCAGTAAAGAA
GTTTTGGCGGCAAAGCTTGGAGGCATGGAGACGGGAAACCAGAATTAAGG
ATGACTTACAAAAAACGTGCTTTCCGGCAATTCTAAGGAGTACTTTTATC
AGGATAGAACGCGAGCTTGGAACTGCCCTAGAATCTGGATTTCGAACGTG
TGGCATTCACCCACTGGACCGTACTAAGATAGCAAAGAAGATACCTTCAC
GTGTTCATGTTGTTGATGGCTTTGATTTAAATATATTCAATGATAGTGTT
CTAGACTTTCTCGAAAACAACCGAACATGTTCTGTAACCAGTGAGTACAc
gttcttataaATGGCAAGACATCCAAAGAGAAAAGCGGGGAAGTACGGAG
CTCGTCAATACCAGACAAAGTATGACCCAAACGATGGGACAATGGAGAGG
GCGTTAACAGAAATCAGGTTGGGAAAAAAAGTCAAAGATATCGCGCTAAA
ATATAAAATCCCACGGTCCACTCTGTATGACAAAATAAAAGACAATCACC
CAAAGAAAGTTGGACGCCCGACCGTGCTCAGTCATGATGAAGAGAAGGCA
CTGGCTTCAATGGTAGAGCTGACATGTGAGTGGCAGGTACCCATGGACAG
AACAGACCTACGATACTTTGTGCAAGACTACCTAAACAAAAAGGGCGTAA
AGTTGTTCAGAAATGAAAACCTCCCCAGCATGGATTGGACCGAACGCTTT
ATTCGTGACTTCAAACTCAAACTACGAAGTGTAGACAACGTCAAACCGAA
CAGAAGTGGGTTAAGTTTGGAAGatgtaaacaaatttttcatcaaTCTGG
AAAAAGAACTCGACGGGGTACCGCCAGAGAATATTTGGAATTTTGACGAG
ACTAATTTCACTGACGATCCAggaaagaaaaagGTCATTGTATCTAAGAG
GAGACGGAGAGTTGAACGATGCATGCCTCACTCGAAAACTTCATTTTCAG
TCATGTGTTGCGGCAACCCGAAGGGCGAGTTCATGCCACCCATGATTGTA
TATAAATCGAAATGTATGTGGGAAAACTGGAAGAAACACGGGCCAAGAGG
TGCTTCGTATACTATGAGTAAAAATGGTTGGTTTGAGGCACAATCCTTCA
CCAAATGGTTTATGGACCTAGCGTTACCACGTCTAAAGGAGTTGACTGGA
AAGAAGGTCATCATTGGTGACAATCTTGGGTGTCATTACACTGCTGACGT
CTTGATTGAATGCCGCCGTCACAACATTGCATTCATTCCGCTCATTCCGA
ACACCACCCACATTTCACAACCCCTTGATGTTGCCGTTTTCTCCCCAGTA
AAGAAGTTTTGGCGGCAAAGCTTGGAGGCATGGAGACGGGAAACCAGAAT
TAAGGATGACTTACAAAAAACGTGCTTTCCGGCAATTCTAAGGAGTACTT
TTATCAGGATAGAACGCGAGCTTGGAACTGCCCTAGAATCTGGATTTCGA
ACGTGTGGCATTCACCCACTGGACCGTACTAAGATAGCAAAGAAGATACC
TTCACGTGTTCATGTTGTTGATGGCTTTGATTTAAATATATTCAATGATA
GTGTTCTAGACTTTCTCGAAAACAACCGAACATGTTCTGTAACCAGTGAG
TACAcgttcttataaATGGCAAGACATCCAAAGAGAAAAGCGGGGAAGTA
CGGAGCTCGTCAATACCAGACAAAGTATGACCCAAACGATGGGACAATGG
AGAGGGCGTTAACAGAAATCAGGTTGGGAAAAAAAGTCAAAGATATCGCG
CTAAAATATAAAATCCCACGGTCCACTCTGTATGACAAAATAAAAGACAA
TCACCCAAAGAAAGTTGGACGCCCGACCGTGCTCAGTCATGATGAAGAGA
AGGCACTGGCTTCAATGGTAGAGCTGACATGTGAGTGGCAGGTACCCATG
GACAGAACAGACCTACGATACTTTGTGCAAGACTACCTAAACAAAAAGGG
CGTAAAGTTGTTCAGAAATGAAAACCTCCCCAGCATGGATTGGACCGAAC
GCTTTATTCGTGACTTCAAACTCAAACTACGAAGTGTAGACAACGTCAAA
CCGAACAGAAGTGGGTTAAGTTTGGAAGatgtaaacaaatttttcatcaa
TCTGGAAAAAGAACTCGACGGGGTACCGCCAGAGAATATTTGGAATTTTG
ACGAGACTAATTTCACTGACGATCCAggaaagaaaaagGTCATTGTATCT
AAGAGGAGACGGAGAGTTGAACGATGCATGCCTCACTCGAAAACTTCATT
TTCAGTCATGTGTTGCGGCAACCCGAAGGGCGAGTTCATGCCACCCATGA
TTGTATATAAATCGAAATGTATGTGGGAAAACTGGAAGAAACACGGGCCA
AGAGGTGCTTCGTATACTATGAGTAAAAATGGTTGGTTTGAGGCACAATC
CTTCACCAAATGGTTTATGGACCTAGCGTTACCACGTCTAAAGGAGTTGA
CTGGAAAGAAGGTCATCATTGGTGACAATCTTGGGTGTCATTACACTGCT
GACGTCTTGATTGAATGCCGCCGTCACAACATTGCATTCATTCCGCTCAT
TCCGAACACCACCCACATTTCACAACCCCTTGATGTTGCCGTTTTCTCCC
CAGTAAAGAAGTTTTGGCGGCAAAGCTTGGAGGCATGGAGACGGGAAACC
AGAATTAAGGATGACTTACAAAAAACGTGCTTTCCGGCAATTCTAAGGAG
TACTTTTATCAGGATAGAACGCGAGCTTGGAACTGCCCTAGAATCTGGAT
TTCGAACGTGTGGCATTCACCCACTGGACCGTACTAAGATAGCAAAGAAG
ATACCTTCACGTGTTCATGTTGTTGATGGCTTTGATTTAAATATATTCAA
TGATAGTGTTCTAGACTTTCTCGAAAACAACCGAACATGTTCTGTAACCA
GTGAGTACAcgttcttataaATGGCAAGACATCCAAAGAGAAAAGCGGGG
AAGTACGGAGCTCGTCAATACCAGACAAAGTATGACCCAAACGATGGGAC
AATGGAGAGGGCGTTAACAGAAATCAGGTTGGGAAAAAAAGTCAAAGATA
TCGCGCTAAAATATAAAATCCCACGGTCCACTCTGTATGACAAAATAAAA
GACAATCACCCAAAGAAAGTTGGACGCCCGACCGTGCTCAGTCATGATGA
AGAGAAGGCACTGGCTTCAATGGTAGAGCTGACATGTGAGTGGCAGGTAC
CCATGGACAGAACAGACCTACGATACTTTGTGCAAGACTACCTAAACAAA
AAGGGCGTAAAGTTGTTCAGAAATGAAAACCTCCCCAGCATGGATTGGAC
CGAACGCTTTATTCGTGACTTCAAACTCAAACTACGAAGTGTAGACAACG
TCAAACCGAACAGAAGTGGGTTAAGTTTGGAAGatgtaaacaaatttttc
atcaaTCTGGAAAAAGAACTCGACGGGGTACCGCCAGAGAATATTTGGAA
TTTTGACGAGACTAATTTCACTGACGATCCAggaaagaaaaagGTCATTG
TATCTAAGAGGAGACGGAGAGTTGAACGATGCATGCCTCACTCGAAAACT
TCATTTTCAGTCATGTGTTGCGGCAACCCGAAGGGCGAGTTCATGCCACC
CATGATTGTATATAAATCGAAATGTATGTGGGAAAACTGGAAGAAACACG
GGCCAAGAGGTGCTTCGTATACTATGAGTAAAAATGGTTGGTTTGAGGCA
CAATCCTTCACCAAATGGTTTATGGACCTAGCGTTACCACGTCTAAAGGA
GTTGACTGGAAAGAAGGTCATCATTGGTGACAATCTTGGGTGTCATTACA
CTGCTGACGTCTTGATTGAATGCCGCCGTCACAACATTGCATTCATTCCG
CTCATTCCGAACACCACCCACATTTCACAACCCCTTGATGTTGCCGTTTT
CTCCCCAGTAAAGAAGTTTTGGCGGCAAAGCTTGGAGGCATGGAGACGGG
AAACCAGAATTAAGGATGACTTACAAAAAACGTGCTTTCCGGCAATTCTA
AGGAGTACTTTTATCAGGATAGAACGCGAGCTTGGAACTGCCCTAGAATC
TGGATTTCGAACGTGTGGCATTCACCCACTGGACCGTACTAAGATAGCAA
AGAAGATACCTTCACGTGTTCATGTTGTTGATGGCTTTGATTTAAATATA
TTCAATGATAGTGTTCTAGACTTTCTCGAAAACAACCGAACATGTTCTGT
AACCAGTGAGTACAcgttcttataaATGGCAAGACATCCAAAGAGAAAAG
CGGGGAAGTACGGAGCTCGTCAATACCAGACAAAGTATGACCCAAACGAT
GGGACAATGGAGAGGGCGTTAACAGAAATCAGGTTGGGAAAAAAAGTCAA
AGATATCGCGCTAAAATATAAAATCCCACGGTCCACTCTGTATGACAAAA
TAAAAGACAATCACCCAAAGAAAGTTGGACGCCCGACCGTGCTCAGTCAT
GATGAAGAGAAGGCACTGGCTTCAATGGTAGAGCTGACATGTGAGTGGCA
GGTACCCATGGACAGAACAGACCTACGATACTTTGTGCAAGACTACCTAA
ACAAAAAGGGCGTAAAGTTGTTCAGAAATGAAAACCTCCCCAGCATGGAT
TGGACCGAACGCTTTATTCGTGACTTCAAACTCAAACTACGAAGTGTAGA
CAACGTCAAACCGAACAGAAGTGGGTTAAGTTTGGAAGatgtaaacaaat
ttttcatcaaTCTGGAAAAAGAACTCGACGGGGTACCGCCAGAGAATATT
TGGAATTTTGACGAGACTAATTTCACTGACGATCCAggaaagaaaaagGT
CATTGTATCTAAGAGGAGACGGAGAGTTGAACGATGCATGCCTCACTCGA
AAACTTCATTTTCAGTCATGTGTTGCGGCAACCCGAAGGGCGAGTTCATG
CCACCCATGATTGTATATAAATCGAAATGTATGTGGGAAAACTGGAAGAA
ACACGGGCCAAGAGGTGCTTCGTATACTATGAGTAAAAATGGTTGGTTTG
AGGCACAATCCTTCACCAAATGGTTTATGGACCTAGCGTTACCACGTCTA
AAGGAGTTGACTGGAAAGAAGGTCATCATTGGTGACAATCTTGGGTGTCA
TTACACTGCTGACGTCTTGATTGAATGCCGCCGTCACAACATTGCATTCA
TTCCGCTCATTCCGAACACCACCCACATTTCACAACCCCTTGATGTTGCC
GTTTTCTCCCCAGTAAAGAAGTTTTGGCGGCAAAGCTTGGAGGCATGGAG
ACGGGAAACCAGAATTAAGGATGACTTACAAAAAACGTGCTTTCCGGCAA
TTCTAAGGAGTACTTTTATCAGGATAGAACGCGAGCTTGGAACTGCCCTA
GAATCTGGATTTCGAACGTGTGGCATTCACCCACTGGACCGTACTAAGAT
AGCAAAGAAGATACCTTCACGTGTTCATGTTGTTGATGGCTTTGATTTAA
ATATATTCAATGATAGTGTTCTAGACTTTCTCGAAAACAACCGAACATGT
TCTGTAACCAGTGAGTACAcgttcttataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009968XLOC_009968Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017785-proteinTCONS_00017785-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017785-exon-sc0000276-1491911889:329962..330041TCONS_00017785-exon-sc0000276-1491911889:329962..330041Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:329962..330041TCONS_00017785-exon-sc0000276-1510915933:329962..330041Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:329962..330041TCONS_00017785-exon-sc0000276-1575043694:329962..330041Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1491911889:330794..330989TCONS_00017785-exon-sc0000276-1491911889:330794..330989Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:330794..330989TCONS_00017785-exon-sc0000276-1510915933:330794..330989Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:330794..330989TCONS_00017785-exon-sc0000276-1575043694:330794..330989Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1491911889:331192..331352TCONS_00017785-exon-sc0000276-1491911889:331192..331352Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:331192..331352TCONS_00017785-exon-sc0000276-1510915933:331192..331352Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:331192..331352TCONS_00017785-exon-sc0000276-1575043694:331192..331352Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1491911889:331683..331913TCONS_00017785-exon-sc0000276-1491911889:331683..331913Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:331683..331913TCONS_00017785-exon-sc0000276-1510915933:331683..331913Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:331683..331913TCONS_00017785-exon-sc0000276-1575043694:331683..331913Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1491911889:332350..332515TCONS_00017785-exon-sc0000276-1491911889:332350..332515Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:332350..332515TCONS_00017785-exon-sc0000276-1510915933:332350..332515Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:332350..332515TCONS_00017785-exon-sc0000276-1575043694:332350..332515Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1491911889:332859..333251TCONS_00017785-exon-sc0000276-1491911889:332859..333251Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:332859..333251TCONS_00017785-exon-sc0000276-1510915933:332859..333251Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:332859..333251TCONS_00017785-exon-sc0000276-1575043694:332859..333251Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1491911889:333726..335022TCONS_00017785-exon-sc0000276-1491911889:333726..335022Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:333726..335022TCONS_00017785-exon-sc0000276-1510915933:333726..335022Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:333726..335022TCONS_00017785-exon-sc0000276-1575043694:333726..335022Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1491911889:335414..335448TCONS_00017785-exon-sc0000276-1491911889:335414..335448Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1510915933:335414..335448TCONS_00017785-exon-sc0000276-1510915933:335414..335448Clytia hemisphaericaexon
TCONS_00017785-exon-sc0000276-1575043694:335414..335448TCONS_00017785-exon-sc0000276-1575043694:335414..335448Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000276supercontigsc0000276:329962..335448 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.655929	0.857322	0.335228	0.40614	4.09758	3.40538	3.90238	4.25063	2.75285	4.58666	3.32536	2.03234	2.71678	2.56504	2.2117	2.10964	1.41063	2.28026	2.89463	2.71201	2.08347	2.40116	2.111	1.40925	4.69162	4.74028	2.37695	2.06361	2.20763	1.9798
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017785 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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