TCONS_00017499 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017499
Unique NameTCONS_00017499
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2253

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017499 ID=TCONS_00017499|Name=TCONS_00017499|organism=Clytia hemisphaerica|type=transcript|length=2253bp
GTAAAAATGCTTCCCCAGTTTTTTACAATATATTTCAAAGCCTGGAAGCC
ATCTACAACTACCATAACTTGGTTTAATGTCGACAATTATGATACCTCNG
TCCGGTTTACCTGGGGAAAAGTCGATTTGTGAAGGATTCCAAGGAGCATC
TGAACCCGAAAGTTTTATTACACAGTTTCAACaagaaaattgtattttgt
tGACTTCATTGGCTCCTGCACTTCATCTCCTGGACTTACAAGATGTCAAA
AGAGTTACATTTCACCAAACTGTAGTGAATGATTTGtttgaaaagctgaa
gaaaCGAATTGGTGAGCTAAACAACAATGATGAAGAAAAACTTTCTGAAC
TTTTGGatcatatttttcattttattcatgTTGATGTATTACGACCCATT
GTTATGGATACTATGAAAAAGACTAAAAATATCAAACCAGAGTATATTGA
GCAAATAGCGAGCCATGAAAAGATATATAAAGATTGCCCAATTGAAGTTA
AAAGAAGGGTTTGGATGAACAACCATCCAATGTTTGGGGATGCTGTTGGG
CCAATCCTTAATAAATATATTGAAGAAAAGAATAAGATATTGTTTGATAT
TGAAACAGtgaaaatcaaatcattttATAATATACCACCACGTCAAAGGA
GGCAGAAAGCTGTCATAAAAGAACTTGTTGATATGATTGGTGGATCTATC
GAACTTTATAATTTAGTGTTACAATTTCTAAGAACTCTATATTTGCGAAC
AAAAGAAGAGCACTATTGCTCTCTACGTGGTGAACTGTTAATGGCTTTTC
ATGACGCTGACATAAAAGAGATTCGTCAAGTAGACCCTTGTCACAAGTTT
GCATGGCTTCTAGATGCCTGTATTAGGGATAAGAGTATTGATACCAAACG
TTTAAAAGAACTTCAATCATTCTTGGATAGCATGAAAAAGACTCAAGAAG
AAATTTTAGGGGATATTGGTATGATCTTGTGTGATCCATATGCAACTTAC
ACAATCGTACAAAGTATTATTCAGCATATTGACAGACTCATGAAAGCAGA
ACAACTACCGCGTtcGTCAAATGATCTAGCATTTCTGGTGAGGTTACTAC
TCTTGAGTGTTCATTCCTGGAATATGTTAAAAAATCAAGACTTCAAGGAA
GATCCAATCAACATTGATATTAtcacaaaatttcttccaatgATTATCTC
CTTGATGCTGGACAACACTTCATCCATACAAACTATCACATCTGATGCCA
TCAAGTTGCCAGATTCTTTGTGGAAAATGGTGGAAACAAACCAAGCTTGC
CAAtgcattttttctttctttgtcaACCAACTCATCATGCATAATAAAAA
GTATATTCTATCAGGTGTTTTACCTGGGTTTGCAACCGCTTTGAAAAACC
AGCCAATCAGTGCAACGGTTGGCAACTTGTTTGTTCATTCCCTCTTACGA
CATCAAGAAGCTTTCACGGACACATCACACTGTAAACTAATATTCGATCA
GTTTCTAATGACTTGGGTGCAATATGAGGAAGTTCTTCATCACATTCTAC
GGCTTTTATGGTGTGCTTATGAAAAGATTGATAGTCAGCTGTTGGTGGCC
ATTCTAACTGCCGCACAGCCTGCACTACAGCATTCGGATGCAGTGCACGA
TGTCCATGCCAGGTTGGTGGATATGATAGCATCATGGAAAGTGAATACAC
CTTCTGGATCAAGCAATACTTCATCCCCTGCCCTCTCTATTTCTCCTGTC
GTCTCGCCTGGTCTCACTGTCCCATGATACACTCAAACTAATCTTTTAAA
GaacctttttttttaagtttaagaGTTTCATTCAATTTGGGGTTTTTGCT
ATATCACACACTCGTGGATCCTTTGTGTAGGTAGTTTTTTCAATGGATCT
TGGTCTCAGTGGTTTTTTGAGCTCTCAGCAGTCCACTAAAACTTACTTGT
CAGGGATAGGCAAGTCAATGTTCCAAAATCTATCTCGTGAAATCCTGGGT
TTGGTTTTATAATGCAGTGTTAGGTTTTAGGTTccaattttaaagaattt
atgAAATTAGGGAAGGAATTTATATTAAATTTGACTTCGTAAACATATTA
GGATAGATatttttatggaatttttatGAAGGCTTTATAGTTTTGCTTGT
ttattcaaaacattcgaattttgtccacttttttgattcatttttgtaaa
tatttcaaaagtcaatGTTGTGAATAAATGAACGCCGTTTATGTTTTCTT
GAT
Run BLAST on NCBI

protein sequence of TCONS_00017499-protein

>TCONS_00017499-protein ID=TCONS_00017499-protein|Name=TCONS_00017499-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
MSTIMIPXSGLPGEKSICEGFQGASEPESFITQFQQENCILLTSLAPALH
LLDLQDVKRVTFHQTVVNDLFEKLKKRIGELNNNDEEKLSELLDHIFHFI
HVDVLRPIVMDTMKKTKNIKPEYIEQIASHEKIYKDCPIEVKRRVWMNNH
PMFGDAVGPILNKYIEEKNKILFDIETVKIKSFYNIPPRQRRQKAVIKEL
VDMIGGSIELYNLVLQFLRTLYLRTKEEHYCSLRGELLMAFHDADIKEIR
QVDPCHKFAWLLDACIRDKSIDTKRLKELQSFLDSMKKTQEEILGDIGMI
LCDPYATYTIVQSIIQHIDRLMKAEQLPRSSNDLAFLVRLLLLSVHSWNM
LKNQDFKEDPINIDIITKFLPMIISLMLDNTSSIQTITSDAIKLPDSLWK
MVETNQACQCIFSFFVNQLIMHNKKYILSGVLPGFATALKNQPISATVGN
LFVHSLLRHQEAFTDTSHCKLIFDQFLMTWVQYEEVLHHILRLLWCAYEK
IDSQLLVAILTAAQPALQHSDAVHDVHARLVDMIASWKVNTPSGSSNTSS
PALSISPVVSPGLTVP
Run BLAST on NCBI

transcript from alignment at sc0000269:193585..204825+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017499 ID=TCONS_00017499|Name=TCONS_00017499|organism=Clytia hemisphaerica|type=transcript|length=11241bp|location=Sequence derived from alignment at sc0000269:193585..204825+ (Clytia hemisphaerica)
GTAAAAATGCTTCCCCAGTTTTTTACAATATATTTCAAAGCCTGGAAGCC
ATCTACAACTACCATAACTTGGTTTAATGTCGACAATTATGATACCTCNG
TCCGGTTTACCTGGGGAAAAGTCGATTTGTGAAGGATTCCAAGGAGCATC
TGAACCCGAAAGTTTTATTACACAGTTTCAACaagaaaattgtattttgt
tGACTTCATTGGCTCCTGCACTTCATCTCCTGGACTTACAAGATGTCAAA
AGAGTTACATTTCACCAAACTGTAGTGAATGATTTGtttgaaaagctgaa
gaaaCGAATTGGTGAGCTAAACAACAATGATGAAGAAAAACTTTCTGAAC
TTTTGGatcatatttttcattttattcatgTTGATGTATTACGACCCATT
GTTATGGATACTATGAAAAAGACTAAAAATATCAAACCAGAGTATATTGA
GCAAATAGCGAGCCATGAAAAGATATATAAAGATTGCCCAATTGAAGTTA
AAAGAAGGGTTTGGATGAACAACCATCCAATGTTTGGGGATGCTGTTGGG
CCAATCCTTAATAAATATATTGAAGAAAAGAATAAGATATTGTTTGATAT
TGAAACAGtgaaaatcaaatcattttATAATATACCACCACGTCAAAGGA
GGCAGAAAGCTGTCATAAAAGAACTTGTTGATATGATTGGTGGATCTATC
GAACTTTATAATTTAGTGTTACAATTTCTAAGAACTCTATATTTGCGAAC
AAAAGAAGAGCACTATTGCTCTCTACGTGGTGAACTGTTAATGGCTTTTC
ATGACGCTGACATAAAAGAGATTCGTCAAGTAGACCCTTGTCACAAGTTT
GCATGGCTTCTAGATGCCTGTATTAGGGATAAGAGTATTGATACCAAACG
TTTAAAAGAACTTCAATCATTCTTGGATAGCATGAAAAAGACTCAAGAAG
AAATTTTAGGGTAAAAATGCTTCCCCAGTTTTTTACAATATATTTCAAAG
CCTGGAAGCCATCTACAACTACCATAACTTGGTTTAATGTCGACAATTAT
GATACCTCcataccttttttcaaagaggccaccctgttgaataattatgt
agtccagcagaaaaacaatgataaaaccatgcataattattacaatatgc
atgatacagtaattatgcatggctctatcattgtttttatggctggacta
cataattattcaagaGGACGtcctatttgaaaaaaaggtctatttctatt
tctatccatttatttgcataagcccagacgatgtcaatcgaacaaatcga
atgccgaatcaattgaacgcaattgaacacaatcgaataattgcaattcg
attgtcgaacgcaatcgaactgtaatcgaatattacctaggatttgccgt
tcgattgcttcgattacgttcgattgtattcaatTATGTTTNCATTTTAT
TCATGTTGATGTATTACGACCCATTGTTATGGATACTATGAAAAAGACTA
AAAATATCAAACCAGAGTATATTGAGCAAATAGCAAGCCATGAAAAGATA
TATAAAGATTGCCCGATTGAAGTTAAAAGAAGGGTTTGGATGAACAACCA
TCCAATGTTTGGGGATGCTGTTGGGCCAATCCTTAATAAATATATTGAAG
AAAAGAATAAGATATTGTTTGATATTGAAACAGtgaaaatcaaatcattt
tATAATATACCACCACGTCAAAGGAGGCAGAAAGCTGTCATAAAAGAACT
TGTTGATATGATTGGTGGATCTATCGAACTTTATAATTTAGTGTTACAAT
TTCTAAGAACTCTATATTTGCGAACAAAAGAAGAGCACTATTGCTCTCTA
CGTGGTGAACTGTTAATGGCTTTTCATGACGCTGACATAAAAGAGATTCG
TCAAGTAGACCCTTGTCACAAGTTTGCATGGCTTCTAGATGCCTGTATTA
GGGATAAGAGTATTGATACCAAACGTTTAAAAGAACTTCAATCATTCTTG
GATAGCATGAAAAAGACTCAAGAAGAAATTTTAGGGTAAAAATGCTTCCC
CAGTTTTTTACAATATATTTCAAAGCCTGGAAGCCATCTACAACTACCAT
AACTTGGTTTAATGTCGACAATTATGATACCTCcataccttttttcaaag
aggccaccctgttgaataattatgtagtccagNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacgcaatcgaacacaatcg
aatattacccaggaattggccgttcgattgagattcgattacgttcgaca
atcgaatcgcaattattcgattgtgttcgattacgttcgattggtttgat
tgcgatttttgttcgaagttgttcgattgacaccgtctgaataagcctaa
aaaagctaacactgcaaatatttaacaaaagacttgtttatgaaaataaa
aagttttggacCCATACTTCAGTGGATGCAAATAAAAAAACCAGGGGGAA
ATAAGATATTACCTTTAAATAAGCTTTGTTTAAATTGACACGCTAACATT
CTCCCTAATTAGCACCAATAACACTGCAAATCTTCTGCAAAACGTGCTAT
AAAGTATTAGGGTTTTGTTTTCGTGATACAAAGCATATAATTTCCGGCCC
AAATGGCTGGAGTAGTTTAATATATATGGAGCAGAGTGGACTGAGTCAAT
AGGTCATTGCGTTCTCCCAAATGATTACAGCAAGAGATCTCTCTGATAGC
AAAGAATTATAATttctatcagtgattctgactGCTCTATCATCCCCAAC
TCTAAAGAAGGTTGTTGAATTTAGATGAAGGATGTCGACAATTGGCCCAA
TTCAGTACAGTCTAGACTTTTCTACTTCAGATTGGACTCTTCCAAAAAAG
GGTTAATTTAGGGGTTTTGACAAGAATTTTCACATTCCCTACATGGAAAT
TTCGAACAACAAATTATCCATTGGAAATCTAGGACAAGACCCCTGGAATT
TCAAATTGTGTGAAAAAGAGGCCTAAAAATAACTACTGTATATACTGATC
TCAGCTTTTGAGAAGAGAACACAACCCTGGAAACCTACAATAACCCCTTT
GGAAATCAAAGATTTGACCCTTGGAAAAGTTTATTTATACCCCTGTATGG
TTGGGAATGGATTGGAATGGCCCATTTTATAAAGGAAAGTAAGCCTGAAC
AGGTCTCTTATTGTTAAAATGTAAACTGAAGCACaactaaaaattaaaac
tagtcaaaattcttgaaatcctaattttttggaaaaactgcCCAAAGTAC
TGAATGTCTCAAAATCatcgggtgcatgtcactagtccgacactttctag
tccgacagtaaaatagtccgaatctataaaataatttagaatttagaagt
ctttttttccgatgtcACTTTTGTccaaaaacgaaagattttacagtgtc
gaatgttgaataagggtttttttactgagataatattaataaaagttcat
tttggcattttgacataattagaaataaaggaccNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGAATTAtgaagcttccc
aaaatttaagaaaagttgggtttaggggcccaacctcaaagtcggaactt
tggatttttataagcacgtggctgcttataaaagatgtgcctccttttcg
gcgattcatatttcgttttacatgttttttttttactcgttacgttgtcg
gacaaaattgttgtcggaatactgacgcattcgtcaaatccaacgtcgga
catttttactgtcggactagaaagtgtcggactactgacgacctcccaaa
TCATCTGCCTTGGGGTGTAGTAGGgcgaaatttgttcgttttttttttag
gtcgctcgatttttttagtcaaagcagtTGTTAtacaagtataggtgatt
tctgtacctaactcgagNtcattttgatatggataccaactttctgaatc
atattatttaaaaaaaggggtacccaccccctattttggtatcaatacca
actgggGATagctctttttttctaaaaaaagggggacccacccccatcaa
taccaacttgacttttcagacttttaaaggaaaaaaagacaccaccaccc
cgctatgggtctggtatctggatgttgacccccccctgNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcaaac
tattgaaaatagtttgtttacattttctctccgtcatataagacatttcc
cgggatttaaaggcgtctttaaggcggtagggcggcttttcttaaGACCG
Cacgaaaaacgtatatttacggcttcggctatatattagaacgtaaattt
acggcttcggcgtggtaaaggttaaccCTTAAAAACGGTGTTTTTCAGCA
agaacagctgttttgtccagtttttgcgctttttggagctcaatatctcg
actcacaatatatctctaatcttaattttttgagagctttccaaaaatgt
acaaCAGGTCTCTATTTTctaaagctaaaattttcattaatttttgaccc
tataatttttgcctgagaccatcATATTNataaattaaccgttgtatgtt
cgttcgttcgttcgttagttaccagcttttctcgagattggctcattagt
tttttctgattttttgcacaaagatgcataactatataaaccctcgaatg
tgacggagcccgattttcgaaagaaaatttttttgggcaaatttgggcca
aaaaacggctaaaaatcggggttttttgactttgtgaaaaattggatcat
taattttttctgattttttgtatgaaagtagggtaccatcataggtaaaa
gatggctcaagcagatttttgcaNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNtttttggctcaaaaaacgcatgttta
tctataagaatcactattaataagcatacatcaatgttcttagtcaaatt
actcaattatttttatgagatagatgtattttttgctcatgagggcttac
ttttgaagaatatatgtgtttagacatgaacctttggttgcttggcgtgt
ttttgtagaaaaactggccaaattcaatatttttttataagcacattatc
aattacttaggtattagcttttctcgagattgcctgtttcattctttatt
attttttgcacaaagatgcgcaactataaaccctcgaatgtgacggcgcc
cgattttcaaaaacaaatgtttttgggcaaatttgggccaaaaaatggct
aaaaaacgagttttttggactttaaaaaattgaatcattaaaaatttttt
ctaattttttaaatgaaaataggtaaaagatggctcaagcagatttttgt
aaaaaacgaatttttcagctcaaaaaacgcatctttatctataagaatca
ctattaataaacatacatcaatgttcttagccaaattactcaatatttCG
ATGAGATCGAtgttttgctcacgaagtcttgaatatgaaaaaatatttaa
atagagcatgaaattttggtttctaaacggtttttataagaaacaaacga
ctaattttaatagatcatcactatttgtgttctgaatgattgtttaatgg
tcggTCACattcacgtagatatcaattatatatgtgttaaatgcataacc
aggtaggtccataaaagtatcacttgttaataagaacattcaaaacaaGC
TTTTGAATGCTTAattaaaaagtttcttaaaatgttcttattttcaccat
gagtattttttgccattttcccaaaaaatggGGCTGTTTAGAGTCCaaca
agccttaaaattttctttacgTGTTCTTAATAtcttggccattgaagcct
tatgttctttttggacctaccccggtggggtagaggtcctataaattaac
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAct
agtttttgctgattttttgctcaaagatgcgtattaacaatgcccaaatc
attgccgagtccgatttttgagaaaaagatttttccggccgaaaatgccc
gaaatatgccggaaatcgccgtttttgcagatttgaattgggctttttcc
atacatttctttgttttttcacttaaaaaaatgtttgataacaatgccac
catcaagcatgattcaattgtcaataaaacttttgcaattttgcaaccgg
aactttctatttcttttttccctaaacccctcccccccatcaacaatcaa
tgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgcattttcgc
taagcgctatattttcttaatgattttttttctccttattgctatctaag
tttcatcatcaggtaggtccattcagcatgttgcttgtatagtttgttct
tagtACAAGAACAGCCAGCGGTGGTGGGCCAATGCCCAAAAATCTTATTT
CTATTATAACATAAACGAATCTTTTTAACAGGGATATTGGTATGATCTTG
TGTGATCCATATGCAACTTACACAATCGTACAAAGTATTATTCAGCATAT
TGACAGACTCATGAAAGCAGAACAACTACCGCGTGTAAGTAATATTTCTT
GTTTGATGTTTTTGGATTAgagcttttttgagttttatgatGTAAAACTG
ACCATATTGTTTTTTCTTGGCACGTCTGTTTATCGGAAAAAACAGTAGGA
AAAGTCCCCATTTTGTTCCCTTTTTGTCCCCAGTGGGCAATACTGTacct
tgattttctaaattaagTCCAGCTTACCCAAATGTNTTTGTCCCCAGTGG
GCATTACTGTACCttgtttttctaaattaaaGTCCAGCTTACgcaaatgt
ttgtttttttttcataaaaaatgaaaatctagaatTCTTCAATTTATATA
CAGTATCAAATGAATGAAACCATGTTAccattatttctttaaagtcGTCA
AATGATCTAGCATTTCTGGTGAGGTTACTACTCTTGAGTGTTCATTCCTG
GAATATGTTAAAAAATCAAGACTTCAAGGAAGATCCAATCGTAAGTTTGC
TTGATATTATATATACTATATTATTACTTTTGTCAGTGTTTTGGCTAAGA
ATAGAAGAAGAAATCACTAAATTTGTAAATCTGTTTAAGAGTCTGTTGTA
TTAAAGGAAGCAATATTTAAAGACCTATGAAAGGAAAATTTGGCCCCATA
TTGATCAACATTTCGAACTGTTTTACTTTCCCAACAGAACATTGATATTA
tcacaaaatttcttccaatgATTATCTCCTTGATGCTGGACAACACTTCA
TCCATACAAACTATCACATCTGATGCCATCAAGTTGCCAGATTCTTTGTG
GAAAATGGTGGAAACAAACCAAGCTTGCCAAtgcattttttctttctttg
tcaACCAACTCATCATGCATAATAAAAAGTAAGATACTAACTTTTAATAT
TTGCTTTAACACGAATTGCATATTGTTCAAGTCCATTACATCTCCCCAAA
TCAAGTTTCACATTattcatttcaaatcaaatttcgATAGATGATAAGGG
TTGTTGTTCGAAAATTACtgactttaaaatattttcaactcctcttttcc
aatttttttccctCTTTATAGGTATATTCTATCAGGTGTTTTACCTGGGT
TTGCAACCGCTTTGAAAAACCAGCCAATCAGTGCAACGGTTGGCAACTTG
TTTGTTCATTCCCTCTTACGACATCAAGAAGCTTTCACGGACACATCACA
CTGTAAACTAATATTCGATCAGTTTCTAATGACTTGGGTGCAATATGAGG
AAGTTCTTCATCACATTCTACGGCTTTTATGGTGTGCTTATGAAAAGATT
GATAGTCAGCTGTTGGTGGCCATTCTAACTGCCGCACAGCCTGCACTACA
GGTAAATATTTCTCTTTAGATTTCAAAGAATTCATCTTCCATAGTTTTTC
AAATATATGTATGATTATTTGGTGATGgaattttgatataaaaagaAGAG
ACAAATCTTTATAATAATTATTATACCTCATACGTCaaccatttcaaaat
ttcctaggAGATTCAAAATTGAATGACATAGCTTTATATTTCTCGAAACT
TAACATATAtctaaattacaccaaccctgaAATGACCtctaaaatttttc
atttaaccTTTTTTTCAGCATTCGGATGCAGTGCACGATGTCCATGCCAG
GTTGGTGGATATGATAGCATCATGGAAAGTGAATACACCTTCTGGATCAA
GCAATACTTCATCCCCTGCCCTCTCTATTTCTCCTGTCGTCTCGCCTGGT
CTCACTGTCCCATGATACACTCAAACTAATCTTTTAAAGaaccttttttt
ttaagtttaagaGTTTCATTCAATTTGGGGTTTTTGCTATATCACACACT
CGTGGATCCTTTGTGTAGGTAGTTTTTTCAATGGATCTTGGTCTCAGTGG
TTTTTTGAGCTCTCAGCAGTCCACTAAAACTTACTTGTCAGGGATAGGCA
AGTCAATGTTCCAAAATCTATCTCGTGAAATCCTGGGTTTGGTTTTATAA
TGCAGTGTTAGGTTTTAGGTTccaattttaaagaatttatgAAATTAGGG
AAGGAATTTATATTAAATTTGACTTCGTAAACATATTAGGATAGATattt
ttatggaatttttatGAAGGCTTTATAGTTTTGCTTGTttattcaaaaca
ttcgaattttgtccacttttttgattcatttttgtaaatatttcaaaagt
caatGTTGTGAATAAATGAACGCCGTTTATGTTTTCTTGAT

Coding sequence (CDS) from alignment at sc0000269:193585..204825+

>TCONS_00017499 ID=TCONS_00017499|Name=TCONS_00017499|organism=Clytia hemisphaerica|type=CDS|length=10206bp|location=Sequence derived from alignment at sc0000269:193585..204825+ (Clytia hemisphaerica)
ATGTCGACAATTATGATACCTCNGTCCGGTTTACCTGGGGAAAAGTCGAT
TTGTGAAGGATTCCAAGGAGCATCTGAACCCGAAAGTTTTATTACACAGT
TTCAACaagaaaattgtattttgttGACTTCATTGGCTCCTGCACTTCAT
CTCCTGGACTTACAAGATGTCAAAAGAGTTACATTTCACCAAACTGTAGT
GAATGATTTGtttgaaaagctgaagaaaCGAATTGGTGAGCTAAACAACA
ATGATGAAGAAAAACTTTCTGAACTTTTGGatcatatttttcattttatt
catgTTGATGTATTACGACCCATTGTTATGGATACTATGAAAAAGACTAA
AAATATCAAACCAGAGTATATTGAGCAAATAGCGAGCCATGAAAAGATAT
ATAAAGATTGCCCAATTGAAGTTAAAAGAAGGGTTTGGATGAACAACCAT
CCAATGTTTGGGGATGCTGTTGGGCCAATCCTTAATAAATATATTGAAGA
AAAGAATAAGATATTGTTTGATATTGAAACAGtgaaaatcaaatcatttt
ATAATATACCACCACGTCAAAGGAGGCAGAAAGCTGTCATAAAAGAACTT
GTTGATATGATTGGTGGATCTATCGAACTTTATAATTTAGTGTTACAATT
TCTAAGAACTCTATATTTGCGAACAAAAGAAGAGCACTATTGCTCTCTAC
GTGGTGAACTGTTAATGGCTTTTCATGACGCTGACATAAAAGAGATTCGT
CAAGTAGACCCTTGTCACAAGTTTGCATGGCTTCTAGATGCCTGTATTAG
GGATAAGAGTATTGATACCAAACGTTTAAAAGAACTTCAATCATTCTTGG
ATAGCATGAAAAAGACTCAAGAAGAAATTTTAGGGGATATTGGTATGATC
TTGTGTGATCCATATGCAACTTACACAATCGTACAAAGTATTATTCAGCA
TATTGACAGACTCATGAAAGCAGAACAACTACCGCGTtcGTCAAATGATC
TAGCATTTCTGGTGAGGTTACTACTCTTGAGTGTTCATTCCTGGAATATG
TTAAAAAATCAAGACTTCAAGGAAGATCCAATCAACATTGATATTAtcac
aaaatttcttccaatgATTATCTCCTTGATGCTGGACAACACTTCATCCA
TACAAACTATCACATCTGATGCCATCAAGTTGCCAGATTCTTTGTGGAAA
ATGGTGGAAACAAACCAAGCTTGCCAAtgcattttttctttctttgtcaA
CCAACTCATCATGCATAATAAAAAGTATATTCTATCAGGTGTTTTACCTG
GGTTTGCAACCGCTTTGAAAAACCAGCCAATCAGTGCAACGGTTGGCAAC
TTGTTTGTTCATTCCCTCTTACGACATCAAGAAGCTTTCACGGACACATC
ACACTGTAAACTAATATTCGATCAGTTTCTAATGACTTGGGTGCAATATG
AGGAAGTTCTTCATCACATTCTACGGCTTTTATGGTGTGCTTATGAAAAG
ATTGATAGTCAGCTGTTGGTGGCCATTCTAACTGCCGCACAGCCTGCACT
ACAGCATTCGGATGCAGTGCACGATGTCCATGCCAGGTTGGTGGATATGA
TAGCATCATGGAAAGTGAATACACCTTCTGGATCAAGCAATACTTCATCC
CCTGCCCTCTCTATTTCTCCTGTCGTCTCGCCTGGTCTCACTGTCCCATG
AATGTCGACAATTATGATACCTCNGTCCGGTTTACCTGGGGAAAAGTCGA
TTTGTGAAGGATTCCAAGGAGCATCTGAACCCGAAAGTTTTATTACACAG
TTTCAACaagaaaattgtattttgttGACTTCATTGGCTCCTGCACTTCA
TCTCCTGGACTTACAAGATGTCAAAAGAGTTACATTTCACCAAACTGTAG
TGAATGATTTGtttgaaaagctgaagaaaCGAATTGGTGAGCTAAACAAC
AATGATGAAGAAAAACTTTCTGAACTTTTGGatcatatttttcattttat
tcatgTTGATGTATTACGACCCATTGTTATGGATACTATGAAAAAGACTA
AAAATATCAAACCAGAGTATATTGAGCAAATAGCGAGCCATGAAAAGATA
TATAAAGATTGCCCAATTGAAGTTAAAAGAAGGGTTTGGATGAACAACCA
TCCAATGTTTGGGGATGCTGTTGGGCCAATCCTTAATAAATATATTGAAG
AAAAGAATAAGATATTGTTTGATATTGAAACAGtgaaaatcaaatcattt
tATAATATACCACCACGTCAAAGGAGGCAGAAAGCTGTCATAAAAGAACT
TGTTGATATGATTGGTGGATCTATCGAACTTTATAATTTAGTGTTACAAT
TTCTAAGAACTCTATATTTGCGAACAAAAGAAGAGCACTATTGCTCTCTA
CGTGGTGAACTGTTAATGGCTTTTCATGACGCTGACATAAAAGAGATTCG
TCAAGTAGACCCTTGTCACAAGTTTGCATGGCTTCTAGATGCCTGTATTA
GGGATAAGAGTATTGATACCAAACGTTTAAAAGAACTTCAATCATTCTTG
GATAGCATGAAAAAGACTCAAGAAGAAATTTTAGGGGATATTGGTATGAT
CTTGTGTGATCCATATGCAACTTACACAATCGTACAAAGTATTATTCAGC
ATATTGACAGACTCATGAAAGCAGAACAACTACCGCGTtcGTCAAATGAT
CTAGCATTTCTGGTGAGGTTACTACTCTTGAGTGTTCATTCCTGGAATAT
GTTAAAAAATCAAGACTTCAAGGAAGATCCAATCAACATTGATATTAtca
caaaatttcttccaatgATTATCTCCTTGATGCTGGACAACACTTCATCC
ATACAAACTATCACATCTGATGCCATCAAGTTGCCAGATTCTTTGTGGAA
AATGGTGGAAACAAACCAAGCTTGCCAAtgcattttttctttctttgtca
ACCAACTCATCATGCATAATAAAAAGTATATTCTATCAGGTGTTTTACCT
GGGTTTGCAACCGCTTTGAAAAACCAGCCAATCAGTGCAACGGTTGGCAA
CTTGTTTGTTCATTCCCTCTTACGACATCAAGAAGCTTTCACGGACACAT
CACACTGTAAACTAATATTCGATCAGTTTCTAATGACTTGGGTGCAATAT
GAGGAAGTTCTTCATCACATTCTACGGCTTTTATGGTGTGCTTATGAAAA
GATTGATAGTCAGCTGTTGGTGGCCATTCTAACTGCCGCACAGCCTGCAC
TACAGCATTCGGATGCAGTGCACGATGTCCATGCCAGGTTGGTGGATATG
ATAGCATCATGGAAAGTGAATACACCTTCTGGATCAAGCAATACTTCATC
CCCTGCCCTCTCTATTTCTCCTGTCGTCTCGCCTGGTCTCACTGTCCCAT
GAATGTCGACAATTATGATACCTCNGTCCGGTTTACCTGGGGAAAAGTCG
ATTTGTGAAGGATTCCAAGGAGCATCTGAACCCGAAAGTTTTATTACACA
GTTTCAACaagaaaattgtattttgttGACTTCATTGGCTCCTGCACTTC
ATCTCCTGGACTTACAAGATGTCAAAAGAGTTACATTTCACCAAACTGTA
GTGAATGATTTGtttgaaaagctgaagaaaCGAATTGGTGAGCTAAACAA
CAATGATGAAGAAAAACTTTCTGAACTTTTGGatcatatttttcatttta
ttcatgTTGATGTATTACGACCCATTGTTATGGATACTATGAAAAAGACT
AAAAATATCAAACCAGAGTATATTGAGCAAATAGCGAGCCATGAAAAGAT
ATATAAAGATTGCCCAATTGAAGTTAAAAGAAGGGTTTGGATGAACAACC
ATCCAATGTTTGGGGATGCTGTTGGGCCAATCCTTAATAAATATATTGAA
GAAAAGAATAAGATATTGTTTGATATTGAAACAGtgaaaatcaaatcatt
ttATAATATACCACCACGTCAAAGGAGGCAGAAAGCTGTCATAAAAGAAC
TTGTTGATATGATTGGTGGATCTATCGAACTTTATAATTTAGTGTTACAA
TTTCTAAGAACTCTATATTTGCGAACAAAAGAAGAGCACTATTGCTCTCT
ACGTGGTGAACTGTTAATGGCTTTTCATGACGCTGACATAAAAGAGATTC
GTCAAGTAGACCCTTGTCACAAGTTTGCATGGCTTCTAGATGCCTGTATT
AGGGATAAGAGTATTGATACCAAACGTTTAAAAGAACTTCAATCATTCTT
GGATAGCATGAAAAAGACTCAAGAAGAAATTTTAGGGGATATTGGTATGA
TCTTGTGTGATCCATATGCAACTTACACAATCGTACAAAGTATTATTCAG
CATATTGACAGACTCATGAAAGCAGAACAACTACCGCGTtcGTCAAATGA
TCTAGCATTTCTGGTGAGGTTACTACTCTTGAGTGTTCATTCCTGGAATA
TGTTAAAAAATCAAGACTTCAAGGAAGATCCAATCAACATTGATATTAtc
acaaaatttcttccaatgATTATCTCCTTGATGCTGGACAACACTTCATC
CATACAAACTATCACATCTGATGCCATCAAGTTGCCAGATTCTTTGTGGA
AAATGGTGGAAACAAACCAAGCTTGCCAAtgcattttttctttctttgtc
aACCAACTCATCATGCATAATAAAAAGTATATTCTATCAGGTGTTTTACC
TGGGTTTGCAACCGCTTTGAAAAACCAGCCAATCAGTGCAACGGTTGGCA
ACTTGTTTGTTCATTCCCTCTTACGACATCAAGAAGCTTTCACGGACACA
TCACACTGTAAACTAATATTCGATCAGTTTCTAATGACTTGGGTGCAATA
TGAGGAAGTTCTTCATCACATTCTACGGCTTTTATGGTGTGCTTATGAAA
AGATTGATAGTCAGCTGTTGGTGGCCATTCTAACTGCCGCACAGCCTGCA
CTACAGCATTCGGATGCAGTGCACGATGTCCATGCCAGGTTGGTGGATAT
GATAGCATCATGGAAAGTGAATACACCTTCTGGATCAAGCAATACTTCAT
CCCCTGCCCTCTCTATTTCTCCTGTCGTCTCGCCTGGTCTCACTGTCCCA
TGAATGTCGACAATTATGATACCTCNGTCCGGTTTACCTGGGGAAAAGTC
GATTTGTGAAGGATTCCAAGGAGCATCTGAACCCGAAAGTTTTATTACAC
AGTTTCAACaagaaaattgtattttgttGACTTCATTGGCTCCTGCACTT
CATCTCCTGGACTTACAAGATGTCAAAAGAGTTACATTTCACCAAACTGT
AGTGAATGATTTGtttgaaaagctgaagaaaCGAATTGGTGAGCTAAACA
ACAATGATGAAGAAAAACTTTCTGAACTTTTGGatcatatttttcatttt
attcatgTTGATGTATTACGACCCATTGTTATGGATACTATGAAAAAGAC
TAAAAATATCAAACCAGAGTATATTGAGCAAATAGCGAGCCATGAAAAGA
TATATAAAGATTGCCCAATTGAAGTTAAAAGAAGGGTTTGGATGAACAAC
CATCCAATGTTTGGGGATGCTGTTGGGCCAATCCTTAATAAATATATTGA
AGAAAAGAATAAGATATTGTTTGATATTGAAACAGtgaaaatcaaatcat
tttATAATATACCACCACGTCAAAGGAGGCAGAAAGCTGTCATAAAAGAA
CTTGTTGATATGATTGGTGGATCTATCGAACTTTATAATTTAGTGTTACA
ATTTCTAAGAACTCTATATTTGCGAACAAAAGAAGAGCACTATTGCTCTC
TACGTGGTGAACTGTTAATGGCTTTTCATGACGCTGACATAAAAGAGATT
CGTCAAGTAGACCCTTGTCACAAGTTTGCATGGCTTCTAGATGCCTGTAT
TAGGGATAAGAGTATTGATACCAAACGTTTAAAAGAACTTCAATCATTCT
TGGATAGCATGAAAAAGACTCAAGAAGAAATTTTAGGGGATATTGGTATG
ATCTTGTGTGATCCATATGCAACTTACACAATCGTACAAAGTATTATTCA
GCATATTGACAGACTCATGAAAGCAGAACAACTACCGCGTtcGTCAAATG
ATCTAGCATTTCTGGTGAGGTTACTACTCTTGAGTGTTCATTCCTGGAAT
ATGTTAAAAAATCAAGACTTCAAGGAAGATCCAATCAACATTGATATTAt
cacaaaatttcttccaatgATTATCTCCTTGATGCTGGACAACACTTCAT
CCATACAAACTATCACATCTGATGCCATCAAGTTGCCAGATTCTTTGTGG
AAAATGGTGGAAACAAACCAAGCTTGCCAAtgcattttttctttctttgt
caACCAACTCATCATGCATAATAAAAAGTATATTCTATCAGGTGTTTTAC
CTGGGTTTGCAACCGCTTTGAAAAACCAGCCAATCAGTGCAACGGTTGGC
AACTTGTTTGTTCATTCCCTCTTACGACATCAAGAAGCTTTCACGGACAC
ATCACACTGTAAACTAATATTCGATCAGTTTCTAATGACTTGGGTGCAAT
ATGAGGAAGTTCTTCATCACATTCTACGGCTTTTATGGTGTGCTTATGAA
AAGATTGATAGTCAGCTGTTGGTGGCCATTCTAACTGCCGCACAGCCTGC
ACTACAGCATTCGGATGCAGTGCACGATGTCCATGCCAGGTTGGTGGATA
TGATAGCATCATGGAAAGTGAATACACCTTCTGGATCAAGCAATACTTCA
TCCCCTGCCCTCTCTATTTCTCCTGTCGTCTCGCCTGGTCTCACTGTCCC
ATGAATGTCGACAATTATGATACCTCNGTCCGGTTTACCTGGGGAAAAGT
CGATTTGTGAAGGATTCCAAGGAGCATCTGAACCCGAAAGTTTTATTACA
CAGTTTCAACaagaaaattgtattttgttGACTTCATTGGCTCCTGCACT
TCATCTCCTGGACTTACAAGATGTCAAAAGAGTTACATTTCACCAAACTG
TAGTGAATGATTTGtttgaaaagctgaagaaaCGAATTGGTGAGCTAAAC
AACAATGATGAAGAAAAACTTTCTGAACTTTTGGatcatatttttcattt
tattcatgTTGATGTATTACGACCCATTGTTATGGATACTATGAAAAAGA
CTAAAAATATCAAACCAGAGTATATTGAGCAAATAGCGAGCCATGAAAAG
ATATATAAAGATTGCCCAATTGAAGTTAAAAGAAGGGTTTGGATGAACAA
CCATCCAATGTTTGGGGATGCTGTTGGGCCAATCCTTAATAAATATATTG
AAGAAAAGAATAAGATATTGTTTGATATTGAAACAGtgaaaatcaaatca
ttttATAATATACCACCACGTCAAAGGAGGCAGAAAGCTGTCATAAAAGA
ACTTGTTGATATGATTGGTGGATCTATCGAACTTTATAATTTAGTGTTAC
AATTTCTAAGAACTCTATATTTGCGAACAAAAGAAGAGCACTATTGCTCT
CTACGTGGTGAACTGTTAATGGCTTTTCATGACGCTGACATAAAAGAGAT
TCGTCAAGTAGACCCTTGTCACAAGTTTGCATGGCTTCTAGATGCCTGTA
TTAGGGATAAGAGTATTGATACCAAACGTTTAAAAGAACTTCAATCATTC
TTGGATAGCATGAAAAAGACTCAAGAAGAAATTTTAGGGGATATTGGTAT
GATCTTGTGTGATCCATATGCAACTTACACAATCGTACAAAGTATTATTC
AGCATATTGACAGACTCATGAAAGCAGAACAACTACCGCGTtcGTCAAAT
GATCTAGCATTTCTGGTGAGGTTACTACTCTTGAGTGTTCATTCCTGGAA
TATGTTAAAAAATCAAGACTTCAAGGAAGATCCAATCAACATTGATATTA
tcacaaaatttcttccaatgATTATCTCCTTGATGCTGGACAACACTTCA
TCCATACAAACTATCACATCTGATGCCATCAAGTTGCCAGATTCTTTGTG
GAAAATGGTGGAAACAAACCAAGCTTGCCAAtgcattttttctttctttg
tcaACCAACTCATCATGCATAATAAAAAGTATATTCTATCAGGTGTTTTA
CCTGGGTTTGCAACCGCTTTGAAAAACCAGCCAATCAGTGCAACGGTTGG
CAACTTGTTTGTTCATTCCCTCTTACGACATCAAGAAGCTTTCACGGACA
CATCACACTGTAAACTAATATTCGATCAGTTTCTAATGACTTGGGTGCAA
TATGAGGAAGTTCTTCATCACATTCTACGGCTTTTATGGTGTGCTTATGA
AAAGATTGATAGTCAGCTGTTGGTGGCCATTCTAACTGCCGCACAGCCTG
CACTACAGCATTCGGATGCAGTGCACGATGTCCATGCCAGGTTGGTGGAT
ATGATAGCATCATGGAAAGTGAATACACCTTCTGGATCAAGCAATACTTC
ATCCCCTGCCCTCTCTATTTCTCCTGTCGTCTCGCCTGGTCTCACTGTCC
CATGAATGTCGACAATTATGATACCTCNGTCCGGTTTACCTGGGGAAAAG
TCGATTTGTGAAGGATTCCAAGGAGCATCTGAACCCGAAAGTTTTATTAC
ACAGTTTCAACaagaaaattgtattttgttGACTTCATTGGCTCCTGCAC
TTCATCTCCTGGACTTACAAGATGTCAAAAGAGTTACATTTCACCAAACT
GTAGTGAATGATTTGtttgaaaagctgaagaaaCGAATTGGTGAGCTAAA
CAACAATGATGAAGAAAAACTTTCTGAACTTTTGGatcatatttttcatt
ttattcatgTTGATGTATTACGACCCATTGTTATGGATACTATGAAAAAG
ACTAAAAATATCAAACCAGAGTATATTGAGCAAATAGCGAGCCATGAAAA
GATATATAAAGATTGCCCAATTGAAGTTAAAAGAAGGGTTTGGATGAACA
ACCATCCAATGTTTGGGGATGCTGTTGGGCCAATCCTTAATAAATATATT
GAAGAAAAGAATAAGATATTGTTTGATATTGAAACAGtgaaaatcaaatc
attttATAATATACCACCACGTCAAAGGAGGCAGAAAGCTGTCATAAAAG
AACTTGTTGATATGATTGGTGGATCTATCGAACTTTATAATTTAGTGTTA
CAATTTCTAAGAACTCTATATTTGCGAACAAAAGAAGAGCACTATTGCTC
TCTACGTGGTGAACTGTTAATGGCTTTTCATGACGCTGACATAAAAGAGA
TTCGTCAAGTAGACCCTTGTCACAAGTTTGCATGGCTTCTAGATGCCTGT
ATTAGGGATAAGAGTATTGATACCAAACGTTTAAAAGAACTTCAATCATT
CTTGGATAGCATGAAAAAGACTCAAGAAGAAATTTTAGGGGATATTGGTA
TGATCTTGTGTGATCCATATGCAACTTACACAATCGTACAAAGTATTATT
CAGCATATTGACAGACTCATGAAAGCAGAACAACTACCGCGTtcGTCAAA
TGATCTAGCATTTCTGGTGAGGTTACTACTCTTGAGTGTTCATTCCTGGA
ATATGTTAAAAAATCAAGACTTCAAGGAAGATCCAATCAACATTGATATT
AtcacaaaatttcttccaatgATTATCTCCTTGATGCTGGACAACACTTC
ATCCATACAAACTATCACATCTGATGCCATCAAGTTGCCAGATTCTTTGT
GGAAAATGGTGGAAACAAACCAAGCTTGCCAAtgcattttttctttcttt
gtcaACCAACTCATCATGCATAATAAAAAGTATATTCTATCAGGTGTTTT
ACCTGGGTTTGCAACCGCTTTGAAAAACCAGCCAATCAGTGCAACGGTTG
GCAACTTGTTTGTTCATTCCCTCTTACGACATCAAGAAGCTTTCACGGAC
ACATCACACTGTAAACTAATATTCGATCAGTTTCTAATGACTTGGGTGCA
ATATGAGGAAGTTCTTCATCACATTCTACGGCTTTTATGGTGTGCTTATG
AAAAGATTGATAGTCAGCTGTTGGTGGCCATTCTAACTGCCGCACAGCCT
GCACTACAGCATTCGGATGCAGTGCACGATGTCCATGCCAGGTTGGTGGA
TATGATAGCATCATGGAAAGTGAATACACCTTCTGGATCAAGCAATACTT
CATCCCCTGCCCTCTCTATTTCTCCTGTCGTCTCGCCTGGTCTCACTGTC
CCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009793XLOC_009793Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017499-proteinTCONS_00017499-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017499-exon-sc0000269-1491911889:193585..194544TCONS_00017499-exon-sc0000269-1491911889:193585..194544Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1510915933:193585..194544TCONS_00017499-exon-sc0000269-1510915933:193585..194544Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1575043694:193585..194544TCONS_00017499-exon-sc0000269-1575043694:193585..194544Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1491911889:202516..202618TCONS_00017499-exon-sc0000269-1491911889:202516..202618Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1510915933:202516..202618TCONS_00017499-exon-sc0000269-1510915933:202516..202618Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1575043694:202516..202618TCONS_00017499-exon-sc0000269-1575043694:202516..202618Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1491911889:202979..203074TCONS_00017499-exon-sc0000269-1491911889:202979..203074Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1510915933:202979..203074TCONS_00017499-exon-sc0000269-1510915933:202979..203074Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1575043694:202979..203074TCONS_00017499-exon-sc0000269-1575043694:202979..203074Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1491911889:203272..203462TCONS_00017499-exon-sc0000269-1491911889:203272..203462Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1510915933:203272..203462TCONS_00017499-exon-sc0000269-1510915933:203272..203462Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1575043694:203272..203462TCONS_00017499-exon-sc0000269-1575043694:203272..203462Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1491911889:203656..203935TCONS_00017499-exon-sc0000269-1491911889:203656..203935Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1510915933:203656..203935TCONS_00017499-exon-sc0000269-1510915933:203656..203935Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1575043694:203656..203935TCONS_00017499-exon-sc0000269-1575043694:203656..203935Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1491911889:204203..204825TCONS_00017499-exon-sc0000269-1491911889:204203..204825Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1510915933:204203..204825TCONS_00017499-exon-sc0000269-1510915933:204203..204825Clytia hemisphaericaexon
TCONS_00017499-exon-sc0000269-1575043694:204203..204825TCONS_00017499-exon-sc0000269-1575043694:204203..204825Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:193585..204825 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.45547	5.4263	3.94941	3.0254	11.6058	7.39481	8.56403	9.81	7.31208	7.9883	8.43022	6.99757	6.91443	3.63344	12.6	12.7739	10.0312	11.2486	3.56518	5.0555	14.946	12.0445	12.0459	11.7697	2.11682	3.74637	6.56665	8.02297	6.35739	6.7744
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010405COBRA1
IPR011989ARM-like
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045892 negative regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
Blast
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BLAST of TCONS_00017499 vs. Swiss-Prot (Human)
Match: NELFB (Negative elongation factor B OS=Homo sapiens GN=NELFB PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 6.247e-111
Identity = 204/543 (37.57%), Postives = 322/543 (59.30%), Query Frame = 2 
Query:  104 GLPGEKSICEGFQGASEPESFITQFQQENCIXXXXXXXXXXXXXXQDVKRVTFHQTVVNDLFEKLKKRIGELNNNDE-----EKLSELLDHIFHFIHVDVLRPIVMDTMKKTKNIKPEYIEQIASHEKIYKDCPIEVKRRVWMNNHPMFGDAVGPILNKYIEEKNKILFDIETVKIKSFYNIPPRQRRQKAVIKELVDMIGGSIELYNLVLQFLRTLYLRTKEEHYCSLRGELLMAFHDADIKEIRQVDPCHKFAWLLDACIRDKSIDTKRLKELQSFLDSMKKTQEEILGDIGMILCDPYATYTIVQSIIQHIDRLMKAEQLPRSSNDXXXXXXXXXXSVHSWNMLKNQDFKEDPINIDIITKFLPMIISLMLDN---------TSSIQTITSDAIKLPDSLWKMV-ETNQACQCIFSFFVNQLIMHNKKYILSGVLPGFATALKNQPISATVGNLFVH------SLLRHQEAFTDTSHCKLIFDQFLMTWVQYEEVLH-HILRLLWCAYEKIDSQLLVAILTAAQPALQHSDAVHDVHARL 1666
            G+   + + E     +EP   I QFQ EN +LL SL  AL  LDL    R+ FHQ+V ++L +KL +R+  + +  +     +KL +LL+  F  + +  L+P+VM  MK    +  + ++ + + +++Y+ C +EVKR++W +N  +FGD V P+L +YI EK   LF  E   + +F++  P+ RRQ  V++ L  M+G +++LY++VLQFLRTL+LRT+  HYC+LR ELLM+ HD D+ EI  VDPCHKF W LDACIR++ +D+KR +ELQ FLD +KK QE++LGD+ MILCDP+A  T+  S ++H+  L+  E LPR S DL  L+RLL L   +W+M+ +Q FKE  + +++IT+FLPM++S ++D+          +  +   S    LP+S  K + E   AC+    + ++     NK  +L  +LPG      +       G++F+H      +LL  + A  D   C  +FD F +T    +E +H H LRLL   + ++    L A+  A +P  Q  +AV +++++L
Sbjct:    9 GVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKESALFSTELSVLHNFFSPSPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLR-LLPGLVETFGD----LAFGDIFLHLLTGNLALLADEFALED--FCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKLEALQKALEPTGQSGEAVKELYSQL 544
The following BLAST results are available for this feature:
BLAST of TCONS_00017499 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NELFB6.247e-11137.57Negative elongation factor B OS=Homo sapiens GN=NE... [more]
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