|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017132 ID=TCONS_00017132|Name=TCONS_00017132|organism=Clytia hemisphaerica|type=transcript|length=1463bp
AGCTTGGGAATAATCCGTAAAACCTTAGAGCACTCAAAATAAGGCCGAAG
TGTAAATTTATTATCAAAAGATAGATCTTAACAaccaattattttttact
ttatttccAGGGTAAAACAGTGGACGACGATTTTCCAGATTGGGCGAAAG
CGTTATGTATCGTTCTGATCATTGCTTCAGTCATTTTCATCCCAATCACT
GCATTATTGATCAAATACGATCTATTCAAGTTGAATAACAATAGCTCTAA
CAGTGACAACGAATTATCGGGAATGCCTGCAAGCCAATCAAAAACACCGT
TAACGAACTAGTACACATTGATTGACTCGCTTACACGTACAGCACGAAAC
CTCTGCTATTAGAAGCAGACTCGCAAAAGTAACAGAGCTTGAGGCTGCAA
GCAACACCTTGAAAGCCTGCGAATCTCTGTTATTTTCTGGCTTCAACATG
TTGATTGCAAATTGCAATAACGAAAACGGGTTGAATCTTCCTGTTTAGAA
TACAGGatttcagtcaaaaaaaaatatgtcaaaaatttATGGCAAGAAAA
TGAGAACGCGTCGGGCGCCATTTCAAACTGATGGATAGCAGTAAATGTGG
ACTTCTGGAGTACAGACAGTACATCTTACTCAAAAATACTACTTTTCAGT
GATGACTGGAGGCTGAAATTGAattgtaaattgattttttggaatAAACT
TCAAAACTGCCAGGAATTCCAGGAATTCATTCGGGTTTTATATTTCAGCA
GAagctaaagtttttttttctctctttgtcGAATTAAAGGTTAGACAGTA
AtatcagtgccgtagcaactggggcgGAGGCAAGGGGGCatgcccccaat
aattttttcaaaaatggttattttgcaaaatgcaatttttttctttttta
acttgTCACAATTGTCTTTTAAGtacattttcaagcaatctagagctcaa
attttcaaaatttcccttcttgggccaaaccatggttggtcCTCGCGATA
TCACTAAACTTCAGctcccccaatatgaaaatgcttcctacggcactgta
atATTTAAGATATAACATGTGGAGAGTCTCATATAAATCCAAATGATCAA
GATAAAtcattgatttaaaatttaatgaaaaatataattttttgtaaaaa
taatccACACAATTTTTAAGAGTTTGTTGcgtttagtttttattttcgta
ctttttaaataaattctTGATAACACTATTGTAAATATCTATGTATGTTA
TAGTTCTTTGTGAtataattttgagaaaaaaatgtttcaagaaAAAGGTT
TGTGAAATATAGAAATTTTAACCCTGATAAGCACCAGTTGATAAGACCct
gattaaaaaaaactgacttttaaTATTTCATCTTGAAATTTATGCCTACG
TACACAATACTGTAACTGCGAGCAGCTGGAATGTTTTTAGAAATAGGTAG
TCCTTAATCCAAA Run BLAST on NCBI transcript from alignment at sc0000259:46978..48440 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017132 ID=TCONS_00017132|Name=TCONS_00017132|organism=Clytia hemisphaerica|type=transcript|length=1463bp|location=Sequence derived from alignment at sc0000259:46978..48440 (Clytia hemisphaerica)
TTTGGATTAAGGACTACCTATTTCTAAAAACATTCCAGCTGCTCGCAGTT
ACAGTATTGTGTACGTAGGCATAAATTTCAAGATGAAATAttaaaagtca
gttttttttaatcagGGTCTTATCAACTGGTGCTTATCAGGGTTAAAATT
TCTATATTTCACAAACCTTTttcttgaaacatttttttctcaaaattata
TCACAAAGAACTATAACATACATAGATATTTACAATAGTGTTATCAagaa
tttatttaaaaagtacgaaaataaaaactaaacgCAACAAACTCTTAAAA
ATTGTGTggattatttttacaaaaaattatatttttcattaaattttaaa
tcaatgaTTTATCTTGATCATTTGGATTTATATGAGACTCTCCACATGTT
ATATCTTAAATattacagtgccgtaggaagcattttcatattgggggagC
TGAAGTTTAGTGATATCGCGAGgaccaaccatggtttggcccaagaaggg
aaattttgaaaatttgagctctagattgcttgaaaatgtaCTTAAAAGAC
AATTGTGAcaagttaaaaaagaaaaaaattgcattttgcaaaataaccat
ttttgaaaaaattattgggggcatGCCCCCTTGCCTCcgccccagttgct
acggcactgataTTACTGTCTAACCTTTAATTCgacaaagagagaaaaaa
aaactttagctTCTGCTGAAATATAAAACCCGAATGAATTCCTGGAATTC
CTGGCAGTTTTGAAGTTTattccaaaaaatcaatttacaatTCAATTTCA
GCCTCCAGTCATCACTGAAAAGTAGTATTTTTGAGTAAGATGTACTGTCT
GTACTCCAGAAGTCCACATTTACTGCTATCCATCAGTTTGAAATGGCGCC
CGACGCGTTCTCATTTTCTTGCCATaaatttttgacatatttttttttga
ctgaaatCCTGTATTCTAAACAGGAAGATTCAACCCGTTTTCGTTATTGC
AATTTGCAATCAACATGTTGAAGCCAGAAAATAACAGAGATTCGCAGGCT
TTCAAGGTGTTGCTTGCAGCCTCAAGCTCTGTTACTTTTGCGAGTCTGCT
TCTAATAGCAGAGGTTTCGTGCTGTACGTGTAAGCGAGTCAATCAATGTG
TACTAGTTCGTTAACGGTGTTTTTGATTGGCTTGCAGGCATTCCCGATAA
TTCGTTGTCACTGTTAGAGCTATTGTTATTCAACTTGAATAGATCGTATT
TGATCAATAATGCAGTGATTGGGATGAAAATGACTGAAGCAATGATCAGA
ACGATACATAACGCTTTCGCCCAATCTGGAAAATCGTCGTCCACTGTTTT
ACCCTggaaataaagtaaaaaataattggtTGTTAAGATCTATCTTTTGA
TAATAAATTTACACTTCGGCCTTATTTTGAGTGCTCTAAGGTTTTACGGA
TTATTCCCAAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017132-exon-sc0000259-1491911889:46978..48440 | TCONS_00017132-exon-sc0000259-1491911889:46978..48440 | Clytia hemisphaerica | exon |
| TCONS_00017132-exon-sc0000259-1510915933:46978..48440 | TCONS_00017132-exon-sc0000259-1510915933:46978..48440 | Clytia hemisphaerica | exon |
| TCONS_00017132-exon-sc0000259-1575043694:46978..48440 | TCONS_00017132-exon-sc0000259-1575043694:46978..48440 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000259 | supercontig | sc0000259:46978..48440 . |
Blast
The following BLAST results are available for this feature:
|
