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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016906 ID=TCONS_00016906|Name=TCONS_00016906|organism=Clytia hemisphaerica|type=transcript|length=1167bp
TGTCGctgcaagcgatttagagcacaTTCAAGATCGGCCAGGATCGGCCA
AGTAATTCTACGGCCAAAATCGGCCTAGTTCGGCCAGGTCCGGTTCGGAT
CAGCCAAGTCCGGTCTAGATCGGCCAATAACGGCCAGGTCCGGTTTTGTT
AAGTTACAAAcctgataaaacaaaaacagtgATGTTCGGCCAATGTAAGA
CCGGTCTAGGCCGATATGGTCCGGTCCAGGCCGATACAAACTGGTCCAGA
ACGTTTTACGGAAGCCAAAATACTGAAACAGTTTTTTCGTCGTAAATGAC
ATACTCCCCTGTATTTCACAACCTTGACTCACTCGCTCTTATGAATCCAT
TTAGAAAAGATTATTAGAAATCCACCTTAGAATAGAACTGCACTGTGTCC
CTTCGTTAGTTTATTTAGACATCCCTGTTTCATTTACATATATCTCCCCT
GTGATAACTTgcatgtcaatatttttcttcgtaTTTCATACAAAGCTAGT
AAAGTAAGACCAAAACCAAATTGAACAATTGGTTGTTTCGACCTTTTAAC
TAACGACAGCTTAATCTTTCAAAAAGAAACTGTTACTTGCCTTTTCCTTT
GCTGATATTCCAATAATACAGTTTTCTTGATAATTTATAATCTAAATTTT
TAGTTCATGAAAAATTATTCTCGTGACGGTTTTCACTCTagtgaaaacat
aaaaataaaaatacttccACCTTCTTGCTTCTGTTGTGGTACTTTTCCTT
TTGCTTTTGTTTAAGAGTCagagacttttcaaaacatttgaacgtTCTCT
GGAGTTCATTCGAACACTtaacaaaaagattcgaaagtttttaggcactc
gaaaatgtaaacaaaaaaataccgtcatacgaaaaagatttgcttgtttg
ttttcagaCCGGACTTGGCCGATTTGGACCGGTCTAGATCAGCCTTTGTT
TAGAGAAAAGATTACGAAACATGGCTCATCTAAGATCGGCCTAGATTGGT
CCAGATCGGTCCAGATCGGTCAACATCGGCCAAATTCGGCCAGGAACGGT
CCAGACCGGTCCATATCGGCCAAAAGTTCGGCTTTTTAAGGATTGGCCCA
TTTTCAATGTGCTCTAAATCGTGTGCAGGGACACATTTCTTTCATTGTAa
aggaccaaaaaaaaatt Run BLAST on NCBI transcript from alignment at sc0000253:302961..304127 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016906 ID=TCONS_00016906|Name=TCONS_00016906|organism=Clytia hemisphaerica|type=transcript|length=1167bp|location=Sequence derived from alignment at sc0000253:302961..304127 (Clytia hemisphaerica)
aatttttttttggtccttTACAATGAAAGAAATGTGTCCCTGCACACGAT
TTAGAGCACATTGAAAATGGGCCAATCCTTAAAAAGCCGAACTTTTGGCC
GATATGGACCGGTCTGGACCGTTCCTGGCCGAATTTGGCCGATGTTGACC
GATCTGGACCGATCTGGACCAATCTAGGCCGATCTTAGATGAGCCATGTT
TCGTAATCTTTTCTCTAAACAAAGGCTGATCTAGACCGGTCCAAATCGGC
CAAGTCCGGtctgaaaacaaacaagcaaatctttttcgtatgacggtatt
tttttgtttacattttcgagtgcctaaaaactttcgaatctttttgttaA
GTGTTCGAATGAACTCCAGAGAacgttcaaatgttttgaaaagtctctGA
CTCTTAAACAAAAGCAAAAGGAAAAGTACCACAACAGAAGCAAGAAGGTg
gaagtatttttatttttatgttttcactAGAGTGAAAACCGTCACGAGAA
TAATTTTTCATGAACTAAAAATTTAGATTATAAATTATCAAGAAAACTGT
ATTATTGGAATATCAGCAAAGGAAAAGGCAAGTAACAGTTTCTTTTTGAA
AGATTAAGCTGTCGTTAGTTAAAAGGTCGAAACAACCAATTGTTCAATTT
GGTTTTGGTCTTACTTTACTAGCTTTGTATGAAAtacgaagaaaaatatt
gacatgcAAGTTATCACAGGGGAGATATATGTAAATGAAACAGGGATGTC
TAAATAAACTAACGAAGGGACACAGTGCAGTTCTATTCTAAGGTGGATTT
CTAATAATCTTTTCTAAATGGATTCATAAGAGCGAGTGAGTCAAGGTTGT
GAAATACAGGGGAGTATGTCATTTACGACGAAAAAACTGTTTCAGTATTT
TGGCTTCCGTAAAACGTTCTGGACCAGTTTGTATCGGCCTGGACCGGACC
ATATCGGCCTAGACCGGTCTTACATTGGCCGAACATcactgtttttgttt
tatcaggTTTGTAACTTAACAAAACCGGACCTGGCCGTTATTGGCCGATC
TAGACCGGACTTGGCTGATCCGAACCGGACCTGGCCGAACTAGGCCGATT
TTGGCCGTAGAATTACTTGGCCGATCCTGGCCGATCTTGAAtgtgctcta
aatcgcttgcagCGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016906-exon-sc0000253-1491911889:302961..304127 | TCONS_00016906-exon-sc0000253-1491911889:302961..304127 | Clytia hemisphaerica | exon |
| TCONS_00016906-exon-sc0000253-1510915933:302961..304127 | TCONS_00016906-exon-sc0000253-1510915933:302961..304127 | Clytia hemisphaerica | exon |
| TCONS_00016906-exon-sc0000253-1575043694:302961..304127 | TCONS_00016906-exon-sc0000253-1575043694:302961..304127 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253 | supercontig | sc0000253:302961..304127 . |
Blast
The following BLAST results are available for this feature:
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