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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016806 ID=TCONS_00016806|Name=TCONS_00016806|organism=Clytia hemisphaerica|type=transcript|length=1041bp
AAATACCAATCTTGTTCATTCTAAAACGtagtaaaatgtcaaaaatcttA
GCAAGTAAATTTGGACCAGGATAAAGGCAATCATTCAAGGATACACCATT
GACAGAATAAGAAGCATCAAACACAGGCCTTATCTTAGTGGTGACCTTGT
CTTCGCGGATAACTGGTCTATGGGGAATGTAATGAACGGCAATCTGCGCC
TCAGGCACACGTTCGATAATTCCGTCTTTCTCataatcaataaaaatttt
ctcgTAGTCAGTATTGATACCAAGACGATCGAGACGCGAATTAAGGGATT
CCAGACGTTTCACACAGGTCGAAAAGTTGTCAGGCACACTCTCGTGGTCG
GGCTTGAAAGGCAGTTTCGCGACATACCTAGTACCATCATGGTAAATGTC
TTTGGTAAATTGGTTAATCACTGAGTTATCCTCGGNTTGAAAGGCAGTTT
CGCGACATACCTAGTACCATCATGGTAAATGTCTTTGGTAAATTGGTTAA
TCACTGAGTTATCCTCGGCACTCTCCGCCTCCTCTATCTGCCAAAACTTA
TGGAGCTTGGCATCAACAGTTTGTACCTCAACTCTCATTTGATGACTATA
AGTTACTTCAGTCAAACCTTtgaaaacaagtaatactttaatggacctac
ctatttataaaacgaataattagaatttaatggaagtaatgtataatttt
aaatttcgaNAAATCGATACCAACCAATACACCTATACTCAAGTCAAACT
CCTCGGAAACATCTGCAAACACCAAATCAGAGAATTCATTCAACTTCTTT
GTACAATCCAACTTCTGGTTTGCAATCGGGCTACAAATGTCTGGAACACA
AAGAGCTCCAACTAAAACGTATTTAGAAGACTTCCGATGTTTCACTTTGA
ACTGAACAACTTCCAAACGTTTGATTTCCGCATTATTCAAATTCCCAAAA
GTCTTAATCACTACATTCTCTTTTCTCACGCACTTTAATTTTAAACGGTC
TTTTAACTCTGTCGTAATGTAGCTTCTTTGGCTTCCAGTGT Run BLAST on NCBI transcript from alignment at sc0000252:11178..12218- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016806 ID=TCONS_00016806|Name=TCONS_00016806|organism=Clytia hemisphaerica|type=transcript|length=1041bp|location=Sequence derived from alignment at sc0000252:11178..12218- (Clytia hemisphaerica)
AAATACCAATCTTGTTCATTCTAAAACGTAGTAAAATGTCAAAAATCTTA
GCAAGTAAATTTGGACCAGGATAAAGGCAATCATTCAAGGATACACCATT
GACAGAATAAGAAGCATCAAACACAGGCCTTATCTTAGTGGTGACCTTGT
CTTCGCGGATAACTGGTCTATGGGGAATGTAATGAACGGCAATCTGCGCC
TCAGGCACACGTTCGATAATTCCGTCTTTCTCATAATCAATAAAAATTTT
CTCGTAGTCAGTATTGATACCAAGACGATCGAGACGCGAATTAAGGGATT
CCAGACGTTTCACACAGGTCGAAAAGTTGTCAGGCACACTCTCGTGGTCG
GGCTTGAAAGGCAGTTTCGCGACATACCTAGTACCATCATGGTAAATGTC
TTTGGTAAATTGGTTAATCACTGAGTTATCCTCGGNTTGAAAGGCAGTTT
CGCGACATACCTAGTACCATCATGGTAAATGTCTTTGGTAAATTGGTTAA
TCACTGAGTTATCCTCGGCACTCTCCGCCTCCTCTATCTGCCAAAACTTA
TGGAGCTTGGCATCAACAGTTTGTACCTCAACTCTCATTTGATGACTATA
AGTTACTTCAGTCAAACCTTTGAAAACAAGTAATACTTTAATGGACCTAC
CTATTTATAAAACGAATAATTAGAATTTAATGGAAGTAATGTATAATTTT
AAATTTCGANAAATCGATACCAACCAATACACCTATACTCAAGTCAAACT
CCTCGGAAACATCTGCAAACACCAAATCAGAGAATTCATTCAACTTCTTT
GTACAATCCAACTTCTGGTTTGCAATCGGGCTACAAATGTCTGGAACACA
AAGAGCTCCAACTAAAACGTATTTAGAAGACTTCCGATGTTTCACTTTGA
ACTGAACAACTTCCAAACGTTTGATTTCCGCATTATTCAAATTCCCAAAA
GTCTTAATCACTACATTCTCTTTTCTCACGCACTTTAATTTTAAACGGTC
TTTTAACTCTGTCGTAATGTAGCTTCTTTGGCTTCCAGTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016806-exon-sc0000252-1575043694:11178..12218 | TCONS_00016806-exon-sc0000252-1575043694:11178..12218 | Clytia hemisphaerica | exon |
| TCONS_00016806-exon-sc0000252-1510915933:11178..12218 | TCONS_00016806-exon-sc0000252-1510915933:11178..12218 | Clytia hemisphaerica | exon |
| TCONS_00016806-exon-sc0000252-1491911889:11178..12218 | TCONS_00016806-exon-sc0000252-1491911889:11178..12218 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252 | supercontig | sc0000252:11178..12218 - |
Blast
The following BLAST results are available for this feature:
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