XLOC_009405 (gene) - C. hemisphaerica

Overview
NameXLOC_009405
Unique NameXLOC_009405
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000252:8421..12218-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009405 ID=XLOC_009405|Name=XLOC_009405|organism=Clytia hemisphaerica|type=gene|length=3798bp|location=Sequence derived from alignment at sc0000252:8421..12218- (Clytia hemisphaerica)
AAATACCAATCTTGTTCATTCTAAAACGTAGTAAAATGTCAAAAATCTTA
GCAAGTAAATTTGGACCAGGATAAAGGCAATCATTCAAGGATACACCATT
GACAGAATAAGAAGCATCAAACACAGGCCTTATCTTAGTGGTGACCTTGT
CTTCGCGGATAACTGGTCTATGGGGAATGTAATGAACGGCAATCTGCGCC
TCAGGCACACGTTCGATAATTCCGTCTTTCTCATAATCAATAAAAATTTT
CTCGTAGTCAGTATTGATACCAAGACGATCGAGACGCGAATTAAGGGATT
CCAGACGTTTCACACAGGTCGAAAAGTTGTCAGGCACACTCTCGTGGTCG
GGCTTGAAAGGCAGTTTCGCGACATACCTAGTACCATCATGGTAAATGTC
TTTGGTAAATTGGTTAATCACTGAGTTATCCTCGGNTTGAAAGGCAGTTT
CGCGACATACCTAGTACCATCATGGTAAATGTCTTTGGTAAATTGGTTAA
TCACTGAGTTATCCTCGGCACTCTCCGCCTCCTCTATCTGCCAAAACTTA
TGGAGCTTGGCATCAACAGTTTGTACCTCAACTCTCATTTGATGACTATA
AGTTACTTCAGTCAAACCTTTGAAAACAAGTAATACTTTAATGGACCTAC
CTATTTATAAAACGAATAATTAGAATTTAATGGAAGTAATGTATAATTTT
AAATTTCGANAAATCGATACCAACCAATACACCTATACTCAAGTCAAACT
CCTCGGAAACATCTGCAAACACCAAATCAGAGAATTCATTCAACTTCTTT
GTACAATCCAACTTCTGGTTTGCAATCGGGCTACAAATGTCTGGAACACA
AAGAGCTCCAACTAAAACGTATTTAGAAGACTTCCGATGTTTCACTTTGA
ACTGAACAACTTCCAAACGTTTGATTTCCGCATTATTCAAATTCCCAAAA
GTCTTAATCACTACATTCTCTTTTCTCACGCACTTTAATTTTAAACGGTC
TTTTAACTCTGTCGTAATGTAGCTTCTTTGGCTTCCAGTGTCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCAACAAAACGCTACGTG
AAGAAACTTGAGCACAATTTTGAGAAACAGGAGTAGGAACAGAGTTGCAA
CTACAACTACAAGGAGCTTTGGATTCAGACTGAGACTCACTATTTGCATC
GGTCAAGATCGAGATCTGATTGTTAGAAATGTTATCAGCTTCAGATCTTT
GTCTACCTTCATCGCAAATAGAAATGTGATGCCTCTTGTTACACCTATTA
CATGAGTACTTATCTCTACAAGCATTGGAACGATGTCCACGAGCCAAACA
AACNNNNNNNCTTTTCTCTAATTAGAATATCCCGACGTGACTGTGTATTT
GTGACCTTTCGACATTTAGCAGAGCTGTGACTCTTTTTACAAAAGACACA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTAAGTACATCGAAGCGAGCGCTTACGGCGCGTGCCAAAAA
TAAAGAAAAAGTAGAAAATTATTTATAAGAAAAAATAACTGTAAAAAGTG
AGGTTTTTACAGCGCATATTTTAAGGCTTCAATTTTTCTTGCCTGAGAAA
GGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATGGTTTAAA
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNACCATTGAGTAAAAAAGGACTAGACGTCAAACCAAAAAC
AACTCTCAAAAAACGATAGACAACGACTTCTCTATCAGAGGACGAAGGGT
CTTTCCAGAGAAATCTCAAAAAGTCTCTATGATCAGGATGGATGCAGATA
TTCAAGAAAGCTTGCTTAATATCAGCTAAAATACCAATCTTGTTCATTCT
AAAACGTAGTAAAATGTCAAAAATCTTAGCAAGTAAATTTGGACCAGGAT
AAAGGCAATCATTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNACACGGGCCTTATCTTAGTGGTGACCTTG
TCTTCACGGATAACTGGTCTATGGGGAATGTAATGAACGGTACCCTCTTC
TTTCGCAATCTGCGCCTCAGGCACACGTTCGATAATTCCGTCTTTCTCAT
AATCAATAAAAATTTTCTCGTAGTCAGTATTAATACCAAGACGATCGAGA
CGCGAATTAAGCGATTCCAGACGTTTCACACAGGTCGAAAAGTTGTCAGG
CACACTCTCGTGGTCAGGCTTGAAAGGCAGTTTCGCGACATACCTAGTAC
CATCATGGTAAATGTCTTTGGTAAATTGGTTAATCACTGAGTTATCCTCG
GCACTCTCTGCCTCCTCTATCTGCCAAAACTTATGGAGCTTGGCATCAAG
TGGATCAACAGTTTGTACCTCAACTCTCATTTGATGACTATAAGTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016806TCONS_00016806Clytia hemisphaericatranscript
TCONS_00016805TCONS_00016805Clytia hemisphaericatranscript
TCONS_00016804TCONS_00016804Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000252supercontigsc0000252:8421..12218 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11	0.52	0.32	0.25	146.03	122.42	12.42	10.93	1.47	5.15	1.1	2.24	1.69	0.58	0.88	2.02	1.34	1.69	0.98	4.74	0.38	1.67	1.1	0.93	2.18	3.16	0.21	0	1.26	0.4